##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936202.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 828188 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.854938733717464 31.0 31.0 34.0 30.0 34.0 2 31.98354117664105 33.0 31.0 34.0 30.0 34.0 3 31.70709911276184 33.0 31.0 34.0 30.0 34.0 4 35.55696411925795 37.0 35.0 37.0 33.0 37.0 5 31.142168203354792 37.0 35.0 37.0 0.0 37.0 6 33.38480272595111 37.0 35.0 37.0 17.0 37.0 7 29.613936690703078 35.0 32.0 37.0 0.0 37.0 8 32.68976850666757 35.0 35.0 37.0 17.0 37.0 9 36.59251884837742 39.0 35.0 39.0 32.0 39.0 10 36.819324839287695 38.0 37.0 39.0 33.0 39.0 11 36.92550362961067 39.0 37.0 39.0 33.0 39.0 12 36.93756127835709 39.0 37.0 39.0 33.0 39.0 13 36.79480142189937 39.0 37.0 39.0 33.0 39.0 14 37.99841702608587 40.0 37.0 41.0 33.0 41.0 15 38.11663535332557 40.0 37.0 41.0 33.0 41.0 16 38.17934333750308 40.0 37.0 41.0 33.0 41.0 17 38.16259955469048 40.0 37.0 41.0 33.0 41.0 18 38.05050906315957 40.0 37.0 41.0 33.0 41.0 19 37.92571976411153 40.0 37.0 41.0 33.0 41.0 20 37.76360922882244 40.0 36.0 41.0 33.0 41.0 21 37.67300540456998 39.0 36.0 41.0 33.0 41.0 22 37.65054673576531 39.0 36.0 41.0 33.0 41.0 23 37.59773143295967 39.0 35.0 41.0 33.0 41.0 24 37.520023231440206 39.0 35.0 41.0 33.0 41.0 25 37.370469023941425 39.0 35.0 41.0 33.0 41.0 26 37.21495119465629 39.0 35.0 41.0 32.0 41.0 27 37.17768912372553 39.0 35.0 41.0 32.0 41.0 28 37.0688358198863 39.0 35.0 41.0 32.0 41.0 29 37.01917680526644 39.0 35.0 41.0 32.0 41.0 30 36.877431211270874 39.0 35.0 41.0 31.0 41.0 31 36.724092838824035 39.0 35.0 41.0 31.0 41.0 32 36.57794727767126 39.0 35.0 41.0 30.0 41.0 33 36.35324588136993 39.0 35.0 40.0 30.0 41.0 34 36.13876800919598 39.0 35.0 40.0 29.0 41.0 35 35.92129323293745 39.0 35.0 40.0 28.0 41.0 36 35.74472704265215 39.0 35.0 40.0 27.0 41.0 37 35.619701082362944 38.0 35.0 40.0 27.0 41.0 38 35.43705414712601 38.0 35.0 40.0 26.0 41.0 39 35.393128130327895 38.0 35.0 40.0 25.0 41.0 40 35.26884596251093 38.0 34.0 40.0 25.0 41.0 41 35.14624940230962 38.0 34.0 40.0 24.0 41.0 42 35.072328988104154 38.0 34.0 40.0 24.0 41.0 43 34.95636135756616 38.0 34.0 40.0 24.0 41.0 44 34.707742686443176 38.0 34.0 40.0 23.0 41.0 45 34.596947794462125 38.0 34.0 40.0 23.0 41.0 46 34.531048505894795 38.0 34.0 40.0 23.0 41.0 47 34.404039903983154 38.0 33.0 40.0 23.0 41.0 48 34.32028718117142 37.0 33.0 40.0 22.0 41.0 49 34.16524750418987 37.0 33.0 40.0 22.0 41.0 50 33.99190401213251 37.0 33.0 40.0 21.0 41.0 51 32.09818543615701 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 19.0 9 29.0 10 33.0 11 34.0 12 17.0 13 23.0 14 30.0 15 61.0 16 137.0 17 249.0 18 445.0 19 779.0 20 1292.0 21 2197.0 22 3309.0 23 5009.0 24 7355.0 25 10559.0 26 12843.0 27 14075.0 28 14624.0 29 15947.0 30 18374.0 31 22736.0 32 29370.0 33 41381.0 34 58295.0 35 70064.0 36 81221.0 37 124300.0 38 150886.0 39 142474.0 40 19.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.457224688114295 21.113563587011644 25.210821697488978 14.218390027385086 2 33.345327389433315 23.62313870763643 26.37178998005284 16.659743922877414 3 31.99768651562206 23.251966944703376 28.460808415480543 16.28953812419402 4 26.742358015329852 25.73413282974397 29.41699227711582 18.106516877810353 5 20.855409641289178 39.11865421860737 24.103947412906248 15.921988727197206 6 25.473443227866138 35.36129477848025 26.053746250851255 13.11151574280236 7 70.56984645998253 18.29777779924365 8.122310393292343 3.01006534748149 8 86.06016991311152 3.111853830289741 8.527894632619647 2.3000816239790964 9 80.77368906576767 5.415920056798698 9.991451216390482 3.818939661043145 10 41.429965176988794 27.146372562751452 18.238129506826954 13.185532753432797 11 29.395620318092025 25.745241418615095 27.1562736963105 17.702864566982377 12 26.13078189976189 23.11999207909315 31.36413471337426 19.3850913077707 13 23.672644375431666 24.996136143001348 32.5783517752008 18.75286770636619 14 21.463363390920904 26.439407477529258 31.92656739774061 20.17066173380923 15 20.37496317261298 25.934328920486653 34.38989697991277 19.30081092698759 16 24.32744739117205 24.438654025414518 31.879476640569532 19.354421942843896 17 24.040676754553314 24.11638420262066 30.092442778692764 21.750496264133265 18 24.64754379440417 23.962675141393017 31.612387525537677 19.777393538665134 19 24.829869546528084 26.001946417963072 29.214864257873817 19.953319777635027 20 24.407984660487717 27.083705632054556 29.339594391611566 19.16871531584616 21 24.589948176018005 25.770597980168752 31.007090177592527 18.632363666220712 22 23.92753819181152 23.46918815534637 30.33236414920284 22.27090950363927 23 22.183610484575965 25.916337836336677 30.754490526305624 21.145561152781735 24 22.01517046854096 25.399546962766905 32.0886079006216 20.496674668070536 25 23.021946707752345 26.9879544258067 29.667177017778574 20.322921848662382 26 21.808816355706675 26.912367723270563 29.503446077460673 21.77536984356209 27 21.36036745280057 26.62921945258806 30.683371408424176 21.327041686187194 28 20.898395050399184 26.254666814781185 31.302554492458235 21.544383642361396 29 21.527358522461085 25.69863364356885 30.96289731317044 21.811110520799627 30 23.050563398648617 25.301380845894894 30.277666423565663 21.370389331890827 31 23.259332422107057 25.75864417257917 29.233217578617417 21.748805826696355 32 23.5384960902597 26.483117359826515 28.737315681946612 21.241070867967178 33 22.922090153443424 26.271088207025457 29.273063603916015 21.5337580356151 34 21.802658333615074 26.405357237728634 29.64689176853565 22.14509266012065 35 21.61103517558815 26.852840176385072 29.367848845914214 22.168275802112564 36 23.10357068684888 27.81337087714384 27.677652900066168 21.405405535941117 37 21.794447637492937 27.551473819953927 28.82497693760354 21.8291016049496 38 21.877399817432757 27.52913589668046 28.793100117364656 21.800364168522123 39 21.759069196849023 26.978053292247655 28.273652842108316 22.989224668795007 40 23.199442638627946 26.10554608373944 28.48036919153622 22.214642086096394 41 20.874970417344855 26.383985278704834 28.829565267789437 23.91147903616087 42 21.66331799060117 26.67365380807256 28.578656053939444 23.084372147386826 43 21.787565142214085 25.83278192874082 29.410351272899387 22.969301656145706 44 21.95962752418533 26.39014330079644 29.193371553318816 22.45685762169942 45 21.734316362951407 26.668944732355452 28.1174081247253 23.47933077996783 46 22.112853603288144 26.829294797799534 28.217868406690265 22.839983192222054 47 20.701700580061534 26.582973914135437 29.52022970629857 23.19509579950446 48 21.642911995827035 26.593478775350526 29.14700526933498 22.61660395948746 49 21.80628069955131 26.249595502470452 29.153887764613835 22.790236033364405 50 21.140369094939796 25.988543663998996 29.497408800900278 23.37367844016093 51 21.095813993924082 26.558462571300232 28.292851381570365 24.05287205320531 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 369.0 1 793.0 2 1217.0 3 6559.5 4 11902.0 5 9129.5 6 6357.0 7 5097.0 8 3837.0 9 3716.5 10 3596.0 11 3577.5 12 3559.0 13 3545.5 14 3532.0 15 3400.5 16 3269.0 17 3058.5 18 2848.0 19 3112.5 20 3377.0 21 3718.5 22 4060.0 23 4198.5 24 4337.0 25 5341.0 26 7491.5 27 8638.0 28 10303.5 29 11969.0 30 13977.0 31 15985.0 32 18233.0 33 20481.0 34 22838.5 35 25196.0 36 27709.5 37 30223.0 38 32482.5 39 34742.0 40 38964.5 41 43187.0 42 46043.0 43 48899.0 44 50765.5 45 52632.0 46 56098.5 47 59565.0 48 61747.5 49 63930.0 50 62453.5 51 60977.0 52 57469.0 53 53961.0 54 49258.0 55 44555.0 56 42780.0 57 41005.0 58 38243.0 59 35481.0 60 32499.0 61 29517.0 62 26435.5 63 23354.0 64 21009.5 65 18665.0 66 16854.0 67 15043.0 68 12941.5 69 10840.0 70 9047.5 71 7255.0 72 6067.0 73 4879.0 74 4093.0 75 2839.0 76 2371.0 77 1804.0 78 1237.0 79 1018.0 80 799.0 81 594.0 82 389.0 83 309.0 84 229.0 85 180.5 86 132.0 87 96.5 88 61.0 89 42.5 90 24.0 91 19.5 92 15.0 93 16.5 94 18.0 95 19.5 96 21.0 97 11.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 828188.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.53599021529026 #Duplication Level Percentage of deduplicated Percentage of total 1 74.52060282018917 27.22684015475963 2 8.277619863689655 6.04862076691315 3 3.809206369209533 4.175193799003825 4 2.3971929488887493 3.5033527249904854 5 1.6539562372006587 3.0214464449440777 6 1.2821639707744894 2.810707817436867 7 0.9461499927558001 2.4197968814266004 8 0.7651074225694693 2.2363165843715267 9 0.5991964977771709 1.9703013641840617 >10 5.612716254742756 41.79219662814665 >50 0.11983836224768574 2.6776344868718063 >100 0.014895154958709056 0.9599108816477178 >500 3.385262490614724E-4 0.09140241483540035 >1k 6.770524981229448E-4 0.3635070327486355 >5k 3.385262490614724E-4 0.7027720177195463 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5682 0.686076108323231 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1754 0.21178766173863905 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1185 0.14308345448134963 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06001052901032133 0.0 2 0.0 0.0 0.0 0.19234763121416876 0.0 3 0.0 0.0 0.0 0.3100745241418615 0.0 4 0.0 0.0 0.0 0.4246620332581491 0.0 5 0.0 0.0 0.0 0.8015088361579737 0.0 6 0.0 0.0 0.0 1.204315928267495 0.0 7 0.0 0.0 0.0 1.5346757016522818 0.0 8 0.0 0.0 0.0 2.1376788845044845 0.0 9 0.0 0.0 0.0 2.4523417388322457 0.0 10 0.0 0.0 0.0 3.0245548112264364 0.0 11 0.0 0.0 0.0 3.6554502117876617 0.0 12 0.0 0.0 0.0 4.1523180727081295 0.0 13 0.0 0.0 0.0 4.389462296000425 0.0 14 0.0 0.0 0.0 4.5275951837022514 0.0 15 0.0 0.0 0.0 4.675508459431916 0.0 16 0.0 0.0 0.0 4.96541847986206 0.0 17 0.0 0.0 0.0 5.341057827449806 0.0 18 0.0 0.0 0.0 5.7684970079257365 0.0 19 0.0 0.0 0.0 6.033171212333431 0.0 20 0.0 0.0 0.0 6.28275222534014 0.0 21 0.0 0.0 0.0 6.59294749501321 0.0 22 0.0 0.0 0.0 6.938400459798983 0.0 23 0.0 0.0 0.0 7.328046289006844 0.0 24 0.0 0.0 0.0 7.616265872000077 0.0 25 0.0 0.0 0.0 7.9097982583664574 0.0 26 0.0 0.0 0.0 8.15406646800002 0.0 27 0.0 0.0 0.0 8.438542939525808 0.0 28 0.0 0.0 0.0 8.7291774331432 0.0 29 0.0 0.0 0.0 9.02729814969548 0.0 30 0.0 0.0 0.0 9.422739764401319 0.0 31 0.0 0.0 0.0 9.736436654479418 0.0 32 0.0 0.0 0.0 10.053272928368921 0.0 33 0.0 0.0 0.0 10.35948359551213 0.0 34 0.0 0.0 0.0 10.666539481373794 0.0 35 0.0 0.0 0.0 11.014045120190103 0.0 36 0.0 0.0 0.0 11.341024018701068 0.0 37 0.0 0.0 0.0 11.673074229522765 0.0 38 0.0 0.0 0.0 12.03217143933503 0.0 39 0.0 0.0 0.0 12.521070095195777 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTACG 30 2.1647647E-6 45.000004 1 ACACGAT 20 7.032145E-4 45.0 27 CCTACGC 20 7.032145E-4 45.0 32 CGTTTTT 2335 0.0 42.301926 1 CGGTTTT 625 0.0 41.760002 1 TTAACGG 105 0.0 40.714287 2 CGTTATT 565 0.0 40.619465 1 TGCGATC 35 6.246173E-6 38.57143 36 TACACGG 70 0.0 38.57143 2 CGTTTTA 340 0.0 37.72059 1 GACCGAT 460 0.0 37.663044 9 CGTTCGA 30 1.1396463E-4 37.500004 14 TATCGCG 30 1.1396463E-4 37.500004 1 CGCACGG 90 0.0 37.5 2 ACAACGA 55 2.746674E-9 36.81818 13 TTGTCGC 55 2.746674E-9 36.81818 39 CCTCGAT 110 0.0 36.81818 15 TAGGGCG 220 0.0 36.81818 5 TAATCGT 55 2.746674E-9 36.81818 21 CTAACGG 80 0.0 36.5625 2 >>END_MODULE