SRR2936201.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936201.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	407703
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	511	0.12533633551874773	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCG	440	0.1079216979026399	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGGGTC	30	2.1620435E-6	45.000004	5
AACCGCT	20	7.0279255E-4	45.0	36
TTAGCGT	20	7.0279255E-4	45.0	43
CGCATCG	25	3.8863625E-5	45.0	21
TAAACGG	20	7.0279255E-4	45.0	2
TTCGTCA	20	7.0279255E-4	45.0	23
TAACGCC	25	3.8863625E-5	45.0	12
TCGGCAT	25	3.8863625E-5	45.0	32
TACGAAT	40	6.7957444E-9	45.0	12
GTCCGTA	35	1.2093551E-7	45.0	26
GGACGTC	20	7.0279255E-4	45.0	11
GGACGTA	20	7.0279255E-4	45.0	8
CATACGG	35	1.2093551E-7	45.0	2
CGGCTTA	20	7.0279255E-4	45.0	39
CCGCGTA	20	7.0279255E-4	45.0	33
CGACTTG	20	7.0279255E-4	45.0	2
CAGTACG	25	3.8863625E-5	45.0	1
ATACGAC	20	7.0279255E-4	45.0	44
TAGTGCG	25	3.8863625E-5	45.0	1
TATACGG	20	7.0279255E-4	45.0	2