##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936200.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 749567 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.93166321356196 31.0 31.0 34.0 30.0 34.0 2 32.056369877542636 33.0 31.0 34.0 30.0 34.0 3 31.95067285512836 33.0 31.0 34.0 30.0 34.0 4 35.695200028816636 37.0 35.0 37.0 35.0 37.0 5 31.17513311018228 37.0 35.0 37.0 0.0 37.0 6 33.39947596412329 37.0 35.0 37.0 17.0 37.0 7 29.558271642161408 35.0 32.0 37.0 0.0 37.0 8 32.593672080014194 35.0 33.0 37.0 17.0 37.0 9 36.52440942570844 39.0 35.0 39.0 32.0 39.0 10 36.82944019680696 38.0 37.0 39.0 33.0 39.0 11 36.921082438261024 39.0 37.0 39.0 33.0 39.0 12 36.985060708382306 39.0 37.0 39.0 33.0 39.0 13 36.84311475825376 39.0 37.0 39.0 33.0 39.0 14 38.168830804984744 40.0 37.0 41.0 33.0 41.0 15 38.24338985040697 40.0 37.0 41.0 33.0 41.0 16 38.27465856954748 40.0 37.0 41.0 34.0 41.0 17 38.23960233041209 40.0 37.0 41.0 34.0 41.0 18 38.131825440554344 40.0 37.0 41.0 33.0 41.0 19 38.022144784922496 40.0 37.0 41.0 33.0 41.0 20 37.99226086527288 40.0 37.0 41.0 33.0 41.0 21 37.93549342487063 40.0 37.0 41.0 33.0 41.0 22 37.923118280287156 40.0 37.0 41.0 33.0 41.0 23 37.8766367783 40.0 36.0 41.0 33.0 41.0 24 37.81527735345873 40.0 36.0 41.0 33.0 41.0 25 37.6931855324474 40.0 36.0 41.0 33.0 41.0 26 37.527724673044574 40.0 36.0 41.0 33.0 41.0 27 37.49098212701466 40.0 36.0 41.0 33.0 41.0 28 37.39555103146216 39.0 36.0 41.0 32.0 41.0 29 37.3807224704396 40.0 36.0 41.0 32.0 41.0 30 37.288183711396044 39.0 36.0 41.0 32.0 41.0 31 37.16319955387577 39.0 35.0 41.0 32.0 41.0 32 37.06918794450663 39.0 35.0 41.0 31.0 41.0 33 36.92851206096319 39.0 35.0 41.0 31.0 41.0 34 36.80733410088758 39.0 35.0 41.0 31.0 41.0 35 36.686553703671585 39.0 35.0 41.0 30.0 41.0 36 36.579481220491296 39.0 35.0 41.0 30.0 41.0 37 36.47912061230017 39.0 35.0 41.0 30.0 41.0 38 36.38607355980186 39.0 35.0 41.0 30.0 41.0 39 36.37367440135438 39.0 35.0 41.0 30.0 41.0 40 36.249386645890226 39.0 35.0 40.0 30.0 41.0 41 36.13333431167594 39.0 35.0 40.0 29.0 41.0 42 36.105372835250215 39.0 35.0 40.0 29.0 41.0 43 35.93472898353316 39.0 35.0 40.0 28.0 41.0 44 35.794105130028406 38.0 35.0 40.0 28.0 41.0 45 35.6903278826309 38.0 35.0 40.0 27.0 41.0 46 35.55496840175728 38.0 34.0 40.0 27.0 41.0 47 35.420189255930424 38.0 34.0 40.0 26.0 41.0 48 35.31050593209146 38.0 34.0 40.0 26.0 41.0 49 35.17729035563198 38.0 34.0 40.0 26.0 41.0 50 35.01521411695018 38.0 34.0 40.0 26.0 41.0 51 33.06303105659668 36.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 12.0 9 22.0 10 45.0 11 31.0 12 14.0 13 19.0 14 24.0 15 46.0 16 83.0 17 160.0 18 304.0 19 562.0 20 944.0 21 1435.0 22 2171.0 23 3130.0 24 4637.0 25 6138.0 26 7580.0 27 8905.0 28 10061.0 29 12256.0 30 15066.0 31 19050.0 32 25092.0 33 34888.0 34 50482.0 35 61564.0 36 73385.0 37 116355.0 38 149553.0 39 145535.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.676816081817904 19.004171741818944 25.189876288577274 12.129135887785882 2 30.566046797684532 25.943911618307634 26.55092873619036 16.939112847817473 3 32.12828206151018 26.226341341067577 26.25996075067339 15.385415846748856 4 27.453049560612996 26.49983257000375 28.418273483224315 17.628844386158942 5 22.847724086039005 39.97934807695643 21.106985766449164 16.0659420705554 6 26.45527351124049 36.89263267993388 23.226742906237867 13.425350902587759 7 71.48660493324813 18.871428438018214 6.409300302708097 3.2326663260255586 8 86.19683097041359 4.90776675067072 6.245205565346393 2.6501967135693008 9 80.75102025569429 6.910389598261396 7.254721726009816 5.0838684200345 10 40.111824560046 33.44344134680422 14.400580601867476 12.0441534912823 11 29.297180905776266 26.91687334154252 26.866711047844955 16.91923470483626 12 28.5200655845308 23.70848770023227 29.167639450509427 18.603807264727504 13 24.075366178073473 24.366067342879287 31.052460954124182 20.506105524923054 14 20.622305944632036 28.620256761570346 28.976329000609685 21.781108293187934 15 19.68456455526991 27.7987157919172 33.19596513720588 19.32075451560701 16 22.918965215917993 26.224340185733897 31.654942119917234 19.20175247843088 17 23.39790839244524 24.963212094449194 29.233410755809686 22.40546875729588 18 22.999945301754213 27.38967964171315 28.608516650279427 21.00185840625321 19 24.81552683082366 28.43361567411586 26.710754342173548 20.040103152886935 20 26.95035934079275 26.836426897128607 27.824730811255034 18.388482950823608 21 25.643071266477847 26.6012244402435 28.189741544118135 19.565962749160516 22 23.71195636947731 25.768877231788483 27.668373874516888 22.850792524217315 23 23.094533243859455 27.912381414870186 28.72378319749936 20.269302143771004 24 23.32800136612204 25.597978566292273 28.977929924876626 22.09609014270906 25 22.223096801219906 28.264718163953322 27.58512581263583 21.927059222190945 26 22.179471614945694 29.86270740307404 26.354815513489786 21.603005468490473 27 22.74379741904326 29.117477156811866 27.718135937147714 20.42058948699716 28 21.031075274124927 29.310121710267396 29.51837527532562 20.140427740282057 29 23.1504321828469 27.248931716577708 28.436950933005324 21.163685167570076 30 22.340097683062353 26.81948378197012 28.41080250331191 22.42961603165561 31 22.16933242792172 27.839806181435417 28.082346207877347 21.908515182765516 32 23.805210208026768 29.179379561800346 27.07603189574781 19.939378334425076 33 22.914696084539475 28.010037795153735 27.22051531083946 21.854750809467333 34 22.853460731328887 27.655299659670185 28.108361227215177 21.38287838178575 35 21.915452521255606 26.296782008813086 28.320083461518454 23.467682008412858 36 23.42405682213865 27.9166505462487 27.770032565467794 20.889260066144853 37 22.163996013698576 28.94110866673693 28.588638507298214 20.306256812266284 38 22.2218961080197 27.322841053568258 27.996029707817982 22.459233130594065 39 22.631199078934905 27.186362259811332 27.948802441943148 22.233636219310615 40 23.11054248652889 25.882943085808208 30.684648603793924 20.321865823868983 41 20.950228598644284 26.94969228901486 29.805207539819655 22.294871572521203 42 22.421344589609735 27.5278927700926 28.32381895147465 21.726943688823013 43 23.58628381452225 27.579389167345948 27.204105837103288 21.630221181028514 44 22.453496485304182 27.771766900090316 27.621680250064372 22.15305636454113 45 21.739217441536248 26.634977260204888 27.405555474027004 24.220249824231857 46 22.162128268720473 28.483244326391105 26.81708239556971 22.537545009318713 47 21.799385511902205 27.17528920029831 29.645915575258787 21.379409712540706 48 22.90922625996075 26.180181358037373 28.114898334638532 22.795694047363344 49 21.256538775052796 26.890724911849105 29.275435017816953 22.577301295281142 50 20.387370308458085 26.507303549916152 29.08052248831659 24.024803653309178 51 20.437265781444488 26.39990821367536 28.307809708805216 24.855016296074933 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 237.0 1 703.5 2 1170.0 3 2952.5 4 4735.0 5 3641.0 6 2547.0 7 2096.0 8 1645.0 9 1662.5 10 1680.0 11 1605.0 12 1530.0 13 1545.0 14 1560.0 15 1707.0 16 1854.0 17 1890.0 18 1926.0 19 2129.0 20 2332.0 21 2731.5 22 3131.0 23 3638.5 24 4146.0 25 5060.0 26 7615.0 27 9256.0 28 11054.5 29 12853.0 30 14872.5 31 16892.0 32 19875.5 33 22859.0 34 25535.0 35 28211.0 36 29890.5 37 31570.0 38 32811.5 39 34053.0 40 38035.0 41 42017.0 42 43836.0 43 45655.0 44 49130.5 45 52606.0 46 57846.5 47 63087.0 48 59299.0 49 55511.0 50 52480.5 51 49450.0 52 46068.0 53 42686.0 54 39863.5 55 37041.0 56 35224.5 57 33408.0 58 33086.5 59 32765.0 60 32781.0 61 32797.0 62 29107.5 63 25418.0 64 21107.5 65 16797.0 66 13687.5 67 10578.0 68 8500.0 69 6422.0 70 5599.0 71 4776.0 72 3988.0 73 3200.0 74 2679.0 75 1862.5 76 1567.0 77 1138.5 78 710.0 79 532.5 80 355.0 81 276.5 82 198.0 83 157.5 84 117.0 85 83.0 86 49.0 87 33.0 88 17.0 89 13.0 90 9.0 91 8.0 92 7.0 93 4.5 94 2.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 749567.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.410764625202763 #Duplication Level Percentage of deduplicated Percentage of total 1 72.44956461912308 22.75696221449693 2 8.023041708455962 5.040197493649897 3 3.6676711495432994 3.456130656028543 4 2.4184724200070415 3.0386427174954282 5 1.8276749733694104 2.8704334199940136 6 1.4347897514857881 2.7040705902343953 7 1.1162640156743882 2.45438943791523 8 0.8557266030018529 2.1503221528332417 9 0.7346326513285888 2.076783596718386 >10 7.297683064773279 47.67171455017558 >50 0.14400042558913748 2.742063795215615 >100 0.02782830307005304 1.7487715446871233 >500 8.834381927000965E-4 0.16677430948222166 >1k 0.001766876385400193 1.1227435210733259 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2095 0.2794946949372104 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCG 2060 0.2748253324919587 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGC 1976 0.26361886262335454 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTATCTGTCGTATGCCGTCTTC 1961 0.26161770728967526 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04869477978619657 0.0 2 0.0 0.0 0.0 0.22359575594976833 0.0 3 0.0 0.0 0.0 0.2973716825847456 0.0 4 0.0 0.0 0.0 0.4769420211935691 0.0 5 0.0 0.0 0.0 1.1313198153067037 0.0 6 0.0 0.0 0.0 1.406278558154241 0.0 7 0.0 0.0 0.0 1.7019159061164646 0.0 8 0.0 0.0 0.0 2.140435744903391 0.0 9 0.0 0.0 0.0 2.30879961364361 0.0 10 0.0 0.0 0.0 3.0877826798671766 0.0 11 0.0 0.0 0.0 3.562856956082645 0.0 12 0.0 0.0 0.0 4.315691592612802 0.0 13 0.0 0.0 0.0 4.49379441731026 0.0 14 0.0 0.0 0.0 4.583846407325829 0.0 15 0.0 0.0 0.0 4.744205654731331 0.0 16 0.0 0.0 0.0 5.015295497267089 0.0 17 0.0 0.0 0.0 5.344152023768389 0.0 18 0.0 0.0 0.0 5.688484151516809 0.0 19 0.0 0.0 0.0 5.924753891246547 0.0 20 0.0 0.0 0.0 6.137676818750025 0.0 21 0.0 0.0 0.0 6.435848963468242 0.0 22 0.0 0.0 0.0 6.76590618316975 0.0 23 0.0 0.0 0.0 7.08995993687022 0.0 24 0.0 0.0 0.0 7.342772560691706 0.0 25 0.0 0.0 0.0 7.572238372286933 0.0 26 0.0 0.0 0.0 7.789830662235664 0.0 27 0.0 0.0 0.0 8.00195312760567 0.0 28 0.0 0.0 0.0 8.23608830164615 0.0 29 0.0 0.0 0.0 8.485032025155856 0.0 30 0.0 0.0 0.0 8.769729723960634 0.0 31 0.0 0.0 0.0 9.039352052585025 0.0 32 0.0 0.0 0.0 9.30390478769743 0.0 33 1.3341035557862073E-4 0.0 0.0 9.556183770096602 0.0 34 1.3341035557862073E-4 0.0 0.0 9.806728417873252 0.0 35 1.3341035557862073E-4 0.0 0.0 10.085289240321412 0.0 36 1.3341035557862073E-4 0.0 0.0 10.37465630157144 0.0 37 1.3341035557862073E-4 0.0 0.0 10.679899195135325 0.0 38 1.3341035557862073E-4 0.0 0.0 10.966331228562623 0.0 39 1.3341035557862073E-4 0.0 0.0 11.284514926617634 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACG 20 7.0317136E-4 45.000004 28 GTCGATC 20 7.0317136E-4 45.000004 14 TAAGTCG 20 7.0317136E-4 45.000004 27 TAACGAG 30 2.1644864E-6 45.000004 1 ATCGTAG 20 7.0317136E-4 45.000004 1 TACGAGT 25 3.889502E-5 45.000004 23 CGTTTAG 20 7.0317136E-4 45.000004 2 TGGTCGA 20 7.0317136E-4 45.000004 12 TGCGTAG 30 2.1644864E-6 45.000004 1 AGTCGAA 20 7.0317136E-4 45.000004 23 GTTTACG 55 1.8189894E-12 45.0 1 CGTTATT 160 0.0 43.593754 1 CGAATAT 100 0.0 42.750004 14 AGGTACG 50 1.0804797E-9 40.500004 1 GTATGCG 45 1.9268555E-8 40.000004 1 TACGGCT 250 0.0 39.600002 7 GACACGA 80 0.0 39.375004 25 TATCCGG 40 3.45608E-7 39.375004 2 GGCCGAT 145 0.0 38.793106 8 CGGTCTA 35 6.24538E-6 38.57143 31 >>END_MODULE