##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936196.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 121234 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2742052559513 31.0 31.0 33.0 28.0 34.0 2 31.450574921226718 31.0 31.0 34.0 30.0 34.0 3 30.61552039856806 31.0 30.0 34.0 26.0 34.0 4 34.86903014005972 35.0 35.0 37.0 32.0 37.0 5 31.526560205882838 35.0 35.0 37.0 0.0 37.0 6 33.50110530049326 35.0 35.0 37.0 17.0 37.0 7 21.345398155632907 32.0 0.0 37.0 0.0 37.0 8 28.303982381180198 35.0 17.0 37.0 17.0 37.0 9 34.475625649570254 35.0 32.0 39.0 28.0 39.0 10 35.991594767144534 37.0 35.0 39.0 32.0 39.0 11 36.48799016777472 37.0 35.0 39.0 32.0 39.0 12 36.922546480360296 39.0 37.0 39.0 33.0 39.0 13 36.725638022336966 39.0 35.0 39.0 33.0 39.0 14 37.96092680271211 40.0 37.0 41.0 33.0 41.0 15 38.078946500156725 40.0 37.0 41.0 33.0 41.0 16 38.14783806522922 40.0 37.0 41.0 33.0 41.0 17 38.08382961875382 40.0 37.0 41.0 33.0 41.0 18 37.878152993384695 39.0 37.0 40.0 33.0 41.0 19 37.71510467360641 39.0 37.0 40.0 33.0 41.0 20 37.48148209248231 39.0 35.0 40.0 33.0 41.0 21 37.3431710576241 39.0 35.0 40.0 33.0 41.0 22 37.23000148473201 39.0 35.0 40.0 33.0 41.0 23 37.12560007918571 38.0 35.0 40.0 33.0 41.0 24 36.90460596862266 38.0 35.0 40.0 32.0 41.0 25 36.73664978471386 38.0 35.0 40.0 32.0 41.0 26 36.562474223402674 38.0 35.0 40.0 32.0 41.0 27 36.487858191596416 38.0 35.0 40.0 31.0 41.0 28 36.348986257980435 38.0 35.0 40.0 31.0 41.0 29 36.27757064849795 38.0 35.0 40.0 31.0 41.0 30 36.003777818103835 38.0 34.0 40.0 30.0 41.0 31 35.812296880413086 38.0 34.0 40.0 30.0 41.0 32 35.64572644637643 38.0 34.0 40.0 29.0 41.0 33 35.18656482504908 38.0 34.0 40.0 25.0 41.0 34 34.668492337133145 37.0 33.0 40.0 24.0 41.0 35 34.22456571588828 37.0 33.0 40.0 21.0 41.0 36 33.75927545078113 37.0 33.0 40.0 18.0 41.0 37 33.50090733622581 37.0 33.0 40.0 16.0 41.0 38 33.180229968490686 37.0 33.0 40.0 15.0 41.0 39 32.9151558143755 37.0 32.0 40.0 15.0 41.0 40 32.65508850652457 37.0 31.0 40.0 12.0 41.0 41 32.41304419552271 36.0 31.0 40.0 10.0 41.0 42 32.12183050959302 36.0 30.0 40.0 10.0 41.0 43 31.81782338287939 36.0 30.0 40.0 10.0 41.0 44 31.462815711764026 35.0 29.0 40.0 9.0 41.0 45 31.30006433838692 35.0 28.0 40.0 9.0 41.0 46 30.95809756338981 35.0 26.0 39.0 8.0 41.0 47 30.759762112938613 35.0 25.0 39.0 8.0 41.0 48 30.462164079383673 35.0 24.0 39.0 8.0 41.0 49 30.170933896431695 35.0 24.0 39.0 8.0 41.0 50 29.887267598198527 35.0 23.0 39.0 8.0 41.0 51 27.729943745154 33.0 19.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 4.0 10 3.0 11 2.0 12 1.0 13 3.0 14 0.0 15 8.0 16 9.0 17 14.0 18 55.0 19 110.0 20 207.0 21 435.0 22 691.0 23 1229.0 24 2020.0 25 3052.0 26 3794.0 27 4221.0 28 4204.0 29 4183.0 30 4471.0 31 5040.0 32 5949.0 33 8067.0 34 9436.0 35 11700.0 36 12720.0 37 16821.0 38 14331.0 39 8449.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.38667370539618 18.45191942854315 21.004833627530232 27.156573238530445 2 41.25905274098025 21.943514195687676 21.451902931520863 15.345530131811207 3 27.050167444776218 22.206641701172938 36.936008050546874 13.807182803503967 4 24.456835541184816 21.569856640876324 38.493326954484715 15.479980863454145 5 18.687826847254073 31.55880363594371 33.57473975947342 16.178629757328803 6 19.907781645413003 27.893990134780672 38.70696339310754 13.491264826698782 7 37.531550555124795 41.053664813501165 17.23031492815547 4.18446970321857 8 60.631506013164625 6.077503010706567 26.20139564808552 7.089595328043289 9 54.63978751835293 7.735453750598017 29.18158272431826 8.443176006730784 10 30.093868056815744 21.269610835244237 34.9316198426184 13.70490126532161 11 21.168978999290626 21.1541316792319 39.410561393668445 18.26632792780903 12 19.514327663856673 17.760694194697855 44.54278502730257 18.182193114142898 13 18.252305458864676 18.49728623983371 46.16196776481845 17.088440536483166 14 15.093950541927182 21.89649768216837 44.23016645495488 18.77938532094957 15 13.54240559578996 22.86569774155765 46.741013247108896 16.850883415543493 16 16.998531765016413 23.46288994836432 41.7811834963789 17.75739479024036 17 16.13986175495323 23.592391573321013 40.55215533596186 19.715591335763893 18 15.918801656301037 23.325964663378258 42.78585215368626 17.969381526634443 19 15.948496296418496 24.988864509955953 39.20269891284623 19.85994028077932 20 15.81239586254681 26.753221043601634 39.684411963640564 17.749971130210998 21 16.534140587623934 26.040549680782622 40.51998614250128 16.90532358909217 22 14.892686870019961 23.46288994836432 39.4905719517627 22.15385122985301 23 14.778857416236368 23.849745121005657 40.8697230149958 20.501674447762177 24 17.25011135490044 22.356764603988978 39.59367834105944 20.79944570005114 25 16.195126779616277 24.08317798637346 38.410016991932956 21.311678242077306 26 14.681524984740255 22.743619776630318 40.59009848722306 21.98475675140637 27 16.752726132933006 22.33119421944339 39.642344556807494 21.273735090816107 28 14.489334675091145 22.800534503522112 40.92663774188759 21.78349307949915 29 16.590230463401355 21.84948116864906 41.08665885807612 20.47362950987347 30 16.968012273784584 22.430176353168253 39.38911526469472 21.212696108352443 31 15.456060181137305 22.143953016480523 39.92691819126647 22.473068611115693 32 15.90230463401356 21.135984954715674 40.46802052229573 22.49368988897504 33 14.882788656647476 21.964135473547024 39.606051107775045 23.547024762030453 34 13.091212036227462 21.186300872692478 42.478182688024816 23.24430440305525 35 13.525908573502482 22.079614629559362 38.887605787155415 25.506871009782735 36 14.848969760958147 23.591566722206643 36.79743306333207 24.762030453503144 37 14.048864180015508 23.149446524902256 38.250820726858805 24.550868568223436 38 14.401075605853144 24.89400663180296 36.04516884702311 24.659748915320783 39 16.587755910058235 22.654535856277942 35.311876206344756 25.44583202731907 40 17.65016414537176 21.906395895540857 35.96515828892885 24.478281670158538 41 15.14261675767524 22.815381823580843 33.90055594965109 28.14144546909283 42 16.215748057475626 22.448323077684478 36.3734595905439 24.96246927429599 43 17.550357160532524 22.370787072933336 36.77516208324397 23.303693683290167 44 17.566854182820002 22.55060461586684 36.11033208505865 23.772209116254515 45 17.811834963789035 21.771120312783545 34.705610637279975 25.71143408614745 46 19.07303231766666 22.515136017948763 34.78892059983173 23.62291106455285 47 15.971592127620966 22.30149957932593 36.95580447729185 24.771103815761254 48 15.76290479568438 22.57452529818368 35.48014583367702 26.182424072454925 49 16.949865549268356 20.91492485606348 37.811175082897535 24.324034511770627 50 16.006235874424664 20.043057228170316 38.174934424336406 25.77577247306861 51 14.773908309550126 19.857465727436196 36.380058399458896 28.988567563554778 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 294.0 1 368.0 2 442.0 3 4365.0 4 8288.0 5 5428.0 6 2568.0 7 2156.0 8 1744.0 9 1673.0 10 1602.0 11 1536.5 12 1471.0 13 1396.0 14 1321.0 15 1272.5 16 1224.0 17 1161.5 18 1099.0 19 1054.5 20 1010.0 21 958.5 22 907.0 23 950.0 24 993.0 25 1083.5 26 1310.0 27 1446.0 28 1592.0 29 1738.0 30 1848.5 31 1959.0 32 2228.0 33 2497.0 34 2643.5 35 2790.0 36 2915.5 37 3041.0 38 3234.0 39 3427.0 40 3828.0 41 4229.0 42 4914.0 43 5599.0 44 6939.0 45 8279.0 46 10335.0 47 12391.0 48 12683.0 49 12975.0 50 12032.0 51 11089.0 52 9063.5 53 7038.0 54 5902.0 55 4766.0 56 4174.0 57 3582.0 58 3227.0 59 2872.0 60 2539.5 61 2207.0 62 1921.5 63 1636.0 64 1425.0 65 1214.0 66 994.5 67 775.0 68 688.5 69 602.0 70 487.5 71 373.0 72 321.5 73 270.0 74 198.0 75 101.0 76 76.0 77 62.0 78 48.0 79 36.0 80 24.0 81 18.5 82 13.0 83 10.0 84 7.0 85 6.5 86 6.0 87 3.0 88 0.0 89 1.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 121234.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 74.81234637147995 #Duplication Level Percentage of deduplicated Percentage of total 1 87.3293788176145 65.3331573650956 2 8.29676508853558 12.414009271326526 3 2.407991355928466 5.404424501377501 4 0.9040993186178305 2.705511655146246 5 0.38258837019559416 1.4311166834386393 6 0.18964034488081324 0.8512463500338189 7 0.10584577388696555 0.5542999488592308 8 0.07938433041522415 0.47511424187934076 9 0.055128007232794554 0.37118300146823496 >10 0.21389666806324284 3.082468614415098 >50 0.017640962314494257 0.8957883102100072 >100 0.014333281880526584 1.7998251315637526 >500 0.001102560144655891 0.5625484600029694 >1k 0.002205120289311782 4.119306465183034 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3210 2.6477720771400763 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1784 1.4715343880429583 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 682 0.5625484600029694 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 334 0.27550027220086776 No Hit CCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGC 246 0.20291337413596844 TruSeq Adapter, Index 19 (95% over 22bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 238 0.19631456522097762 No Hit CCTGTCACTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGC 196 0.16167081841727568 TruSeq Adapter, Index 19 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTC 192 0.15837141395978027 No Hit CTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGCT 145 0.11960341158420906 TruSeq Adapter, Index 13 (95% over 23bp) GAATGATACCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCG 141 0.11630400712671363 No Hit GCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGC 125 0.10310638929673195 TruSeq Adapter, Index 19 (95% over 22bp) CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 123 0.10145668706798422 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 123 0.10145668706798422 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.26230265437088607 0.0 2 0.0 0.0 0.0 1.021990530709207 0.0 3 0.0 0.0 0.0 1.3263605919131596 0.0 4 0.0 0.0 0.0 1.717340020126367 0.0 5 0.0 0.0 0.0 3.053598825412013 0.0 6 0.0 0.0 0.0 4.32799379711962 0.0 7 0.0 0.0 0.0 5.668376857977135 0.0 8 0.0 0.0 0.0 8.322747744032203 0.0 9 0.0 0.0 0.0 9.738192256297738 0.0 10 0.0 0.0 0.0 11.988386096309616 0.0 11 0.0 0.0 0.0 14.286421300955178 0.0 12 0.0 0.0 0.0 16.191827375158784 0.0 13 0.0 0.0 0.0 17.083491429796922 0.0 14 0.0 0.0 0.0 17.62459376082617 0.0 15 0.0 0.0 0.0 18.150023920682315 0.0 16 0.0 0.0 0.0 18.974875035056172 0.0 17 0.0 0.0 0.0 19.930052625501098 0.0 18 0.0 0.0 0.0 21.061748354422026 0.0 19 0.0 0.0 0.0 21.737301417094216 0.0 20 0.0 0.0 0.0 22.40213141527954 0.0 21 0.0 0.0 0.0 23.126350693699788 0.0 22 0.0 0.0 0.0 23.89098767672435 0.0 23 0.0 0.0 0.0 24.612732401801473 0.0 24 0.0 0.0 0.0 25.203325799693154 0.0 25 0.0 0.0 0.0 25.748552386294275 0.0 26 0.0 0.0 0.0 26.27233284392167 0.0 27 0.0 0.0 0.0 26.805186663807184 0.0 28 0.0 0.0 0.0 27.287724565715887 0.0 29 0.0 0.0 0.0 27.789234043255192 0.0 30 0.0 0.0 0.0 28.39220020786248 0.0 31 0.0 0.0 0.0 28.887110876486794 0.0 32 0.0 0.0 0.0 29.374597885081744 0.0 33 0.0 0.0 0.0 29.923948727254732 0.0 34 0.0 0.0 0.0 30.42628305590841 0.0 35 0.0 0.0 0.0 30.962436280251413 0.0 36 0.0 0.0 0.0 31.4235280531864 0.0 37 0.0 0.0 0.0 31.887094379464507 0.0 38 0.0 0.0 0.0 32.400976623719416 0.0 39 0.0 0.0 0.0 32.99321972383985 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCCTAG 20 7.008311E-4 45.0 14 CGTGGCG 20 7.008311E-4 45.0 27 TAGAGGA 20 7.008311E-4 45.0 4 GCGACCT 20 7.008311E-4 45.0 11 TGCCAGT 35 1.1999327E-7 45.0 24 CACGGGC 25 3.870118E-5 45.0 4 GGGTACC 40 6.728442E-9 45.0 7 GACCGAT 20 7.008311E-4 45.0 9 TGGCGAC 20 7.008311E-4 45.0 29 GCAGTCT 20 7.008311E-4 45.0 5 CGACCTC 20 7.008311E-4 45.0 12 ACCTGGT 40 6.728442E-9 45.0 11 CGCTGTA 20 7.008311E-4 45.0 1 AGGCGAT 45 3.783498E-10 45.0 7 CCTCGAT 20 7.008311E-4 45.0 15 ACGGGCT 20 7.008311E-4 45.0 5 GTAGCAT 35 1.1999327E-7 45.0 29 GGGGTCT 20 7.008311E-4 45.0 7 CCTCAAG 20 7.008311E-4 45.0 24 TGCCTCA 20 7.008311E-4 45.0 22 >>END_MODULE