SRR2936195.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936195.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	126395
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2800	2.215277503065786	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1611	1.274575734799636	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	581	0.4596700818861506	No Hit
GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA	490	0.3876735630365125	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCG	394	0.31172119150282845	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTC	389	0.3077653388187824	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	332	0.26266861822065746	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGC	309	0.24447169587404563	No Hit
GCTCAAATTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA	290	0.2294394556746707	No Hit
GAATCTATCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTC	259	0.2049131690335852	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCG	254	0.20095731634953914	No Hit
GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT	233	0.18434273507654575	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGC	205	0.1621899600458879	No Hit
GCTCAAATTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT	128	0.10126982871157877	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTATG	20	7.009445E-4	45.000004	7
TCGTTCA	20	7.009445E-4	45.000004	16
CTCGTTC	20	7.009445E-4	45.000004	15
CCAGGCA	20	7.009445E-4	45.000004	5
ACACCCA	20	7.009445E-4	45.000004	29
CCTGTCA	20	7.009445E-4	45.000004	1
TGAAACG	20	7.009445E-4	45.000004	4
CGTTCAT	20	7.009445E-4	45.000004	17
CATAGTT	20	7.009445E-4	45.000004	36
CGATGAG	20	7.009445E-4	45.000004	10
TAGGATC	20	7.009445E-4	45.000004	6
ATATTGC	20	7.009445E-4	45.000004	30
TGTCACT	25	3.8710576E-5	45.0	3
AGGATCA	25	3.8710576E-5	45.0	7
AAGGCGA	50	2.1827873E-11	45.0	6
AAGGTAT	30	2.15014E-6	44.999996	6
CGTTTTA	455	0.0	44.010986	1
TGCATTA	205	0.0	43.90244	15
ATTAGAA	200	0.0	43.875	18
AACTTGA	170	0.0	43.676468	5