SRR2936193.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936193.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	306498
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2168	0.7073455617981195	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCG	1608	0.5246363760938081	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTC	1587	0.5177847816298964	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1233	0.40228647495252823	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGC	1066	0.3477999856442783	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCG	1001	0.32659266944645643	No Hit
GAATCTATCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTC	976	0.3184360093703711	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGC	678	0.22120862126343402	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	463	0.15106134460910023	No Hit
GCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCTGC	369	0.1203923027230194	No Hit
GAATATGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTC	338	0.11027804422867359	No Hit
GAACTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCGTCTTCT	317	0.10342644976476192	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCGCACATGTTCGTATGCCG	314	0.1024476505556317	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACGACG	20	7.0251804E-4	45.000004	26
TATGCGG	30	2.1602737E-6	45.000004	2
GGCCCGA	35	1.2080272E-7	45.000004	24
CCCAATG	20	7.0251804E-4	45.000004	24
ATATAGG	30	2.1602737E-6	45.000004	3
CCGGTAA	20	7.0251804E-4	45.000004	41
ACCCGCT	20	7.0251804E-4	45.000004	34
AGTACGG	20	7.0251804E-4	45.000004	2
ATCGATG	20	7.0251804E-4	45.000004	32
TCACGGG	25	3.884089E-5	45.0	3
CGTTTTA	445	0.0	43.988766	1
GTAAGGC	50	1.0768417E-9	40.5	4
GAAACGG	130	0.0	39.80769	5
TATCTCT	210	0.0	39.642857	6
ATAGGAT	40	3.4471668E-7	39.375004	5
AGGCGAT	120	0.0	39.375004	7
CGTTATT	195	0.0	39.23077	1
TACGGCT	190	0.0	39.078945	7
ACACGCG	260	0.0	38.942307	36
CTATCTC	215	0.0	38.720932	5