##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936192.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 82933 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25725585713769 31.0 31.0 33.0 30.0 34.0 2 31.433361870425525 31.0 31.0 34.0 30.0 34.0 3 30.813729154859946 31.0 30.0 34.0 27.0 34.0 4 34.98413176901836 35.0 35.0 37.0 32.0 37.0 5 31.552687108871016 35.0 35.0 37.0 0.0 37.0 6 33.49073348365548 35.0 35.0 37.0 18.0 37.0 7 21.05584025659267 32.0 0.0 37.0 0.0 37.0 8 28.080655468872465 35.0 17.0 37.0 17.0 37.0 9 34.280503539001366 35.0 32.0 39.0 28.0 39.0 10 35.7279490673194 37.0 34.0 39.0 32.0 39.0 11 36.31690641843416 37.0 35.0 39.0 32.0 39.0 12 36.82712551095462 39.0 35.0 39.0 33.0 39.0 13 36.668117637128766 39.0 35.0 39.0 32.0 39.0 14 38.00607719484403 40.0 37.0 40.0 33.0 41.0 15 38.06875429563624 40.0 37.0 41.0 33.0 41.0 16 38.11112584857656 40.0 37.0 41.0 33.0 41.0 17 38.04969071419097 40.0 37.0 41.0 33.0 41.0 18 37.86856860357156 39.0 37.0 40.0 33.0 41.0 19 37.745216017749264 39.0 37.0 40.0 33.0 41.0 20 37.61939155704002 39.0 36.0 40.0 33.0 41.0 21 37.54581409089265 39.0 36.0 40.0 33.0 41.0 22 37.46729287497136 39.0 35.0 40.0 33.0 41.0 23 37.41614315170077 39.0 35.0 40.0 33.0 41.0 24 37.19531428984843 39.0 35.0 40.0 33.0 41.0 25 36.9356347895289 38.0 35.0 40.0 32.0 41.0 26 36.64678716554327 38.0 35.0 40.0 31.0 41.0 27 36.61956036800791 38.0 35.0 40.0 31.0 41.0 28 36.33284699697346 38.0 35.0 40.0 31.0 41.0 29 36.1055550866362 38.0 35.0 40.0 30.0 41.0 30 36.01389073107207 38.0 34.0 40.0 30.0 41.0 31 35.665006692149085 38.0 34.0 40.0 29.0 41.0 32 35.55543631606236 38.0 34.0 40.0 29.0 41.0 33 35.379185607659196 38.0 34.0 40.0 27.0 41.0 34 34.75405447771092 38.0 33.0 40.0 25.0 41.0 35 34.48718845332979 38.0 33.0 40.0 23.0 41.0 36 33.98051439113501 37.0 33.0 40.0 21.0 41.0 37 33.84745517465906 37.0 33.0 40.0 19.0 41.0 38 33.757780376930775 37.0 33.0 40.0 18.0 41.0 39 33.604222685782496 37.0 33.0 40.0 16.0 41.0 40 33.42047194723452 37.0 33.0 40.0 15.0 41.0 41 33.18840509809123 37.0 32.0 40.0 15.0 41.0 42 32.95542184655083 37.0 31.0 40.0 15.0 41.0 43 32.774589126162084 37.0 31.0 40.0 15.0 41.0 44 32.49146901715843 37.0 30.0 40.0 13.0 41.0 45 32.3932210338466 37.0 30.0 40.0 12.0 41.0 46 31.968396175225784 36.0 30.0 40.0 10.0 41.0 47 31.77409475118469 36.0 30.0 40.0 10.0 41.0 48 31.549419410849723 35.0 28.0 40.0 10.0 41.0 49 31.282746313289042 35.0 27.0 40.0 8.0 41.0 50 30.99615352151737 35.0 27.0 39.0 8.0 41.0 51 28.424873090325924 33.0 21.0 38.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 4.0 11 2.0 12 1.0 13 0.0 14 2.0 15 2.0 16 7.0 17 9.0 18 18.0 19 55.0 20 124.0 21 229.0 22 445.0 23 685.0 24 1168.0 25 1789.0 26 2277.0 27 2403.0 28 2525.0 29 2572.0 30 2891.0 31 3280.0 32 4247.0 33 5386.0 34 6589.0 35 8613.0 36 10088.0 37 12259.0 38 10138.0 39 5122.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.07088854858742 19.571220141560055 21.88272460902174 21.47516670083079 2 36.75135350222469 28.111849324153233 21.4522566409029 13.684540532719183 3 25.699058275957704 26.031857041226047 33.95873777627724 14.310346906539012 4 23.588921177335923 21.566806940542367 38.967600352091445 15.876671530030265 5 20.012540243328953 31.99209000036174 30.569254699576764 17.426115056732545 6 18.353369587498342 32.25615858584641 35.49371179144611 13.896760035209144 7 37.68343120350162 41.72404229920538 15.922491649886053 4.670034847406943 8 60.63689966599545 7.936527076073458 23.550335813246836 7.8762374446842625 9 55.014288642639244 7.83765208059518 25.475986639817684 11.672072636947897 10 28.137170969336694 22.228787093195713 33.809219490432035 15.824822447035558 11 19.38311649162577 23.56962849529138 36.618716313168456 20.42853869991439 12 17.986808628652046 20.585291741526294 41.648077363655 19.779822266166665 13 16.27337730457116 22.469945618752487 44.95797812692173 16.298698949754623 14 14.428514584061833 27.019401203381044 38.896458587052194 19.655625625504925 15 12.857366790059446 25.392786948500596 45.11834854641699 16.63149771502297 16 13.856968878492276 27.623503309900766 37.18785043348245 21.33167737812451 17 13.706244800019293 26.480411898761652 37.33013396356095 22.48320933765811 18 14.199413984782897 27.584917945811675 38.900075964935546 19.31559210446987 19 14.549093846840218 28.240869135326108 35.369515150784366 21.840521867049308 20 14.371842330555992 28.367477361243417 38.54195555448374 18.718724753716856 21 15.373856004244391 30.332919344531128 37.4157452401336 16.87747941109088 22 12.769343928231223 25.71111620223554 35.76742671795305 25.75211315158019 23 13.09852531561622 27.625914895156328 38.05481533285906 21.220744456368394 24 17.313976342348646 24.038681827499307 35.828922141970025 22.818419688182026 25 14.242822519383116 30.58251841848239 33.65367224144792 21.520986820686577 26 13.390327131539918 27.75372891370142 36.80923154835831 22.04671240640035 27 17.059554097886245 27.130334125137157 35.18985204924457 20.620259727732023 28 12.55712442574126 24.85138605862564 38.20192203344869 24.38956748218441 29 15.126668515548698 26.151230511376657 36.65247850674641 22.06962246632824 30 14.28743684661112 26.4466497051837 39.61511099321139 19.65080245499379 31 14.435749339828535 25.85098814705847 33.30640396464616 26.406858548466833 32 13.785827113453028 26.697454571762748 36.28109437738898 23.235623937395246 33 11.95905128236046 22.473562996635838 38.80964151785176 26.75774420315194 34 12.133891213389122 23.470753499813103 36.48969650199559 27.90565878480219 35 12.118215909227931 22.269784042540365 36.877961728142 28.73403832008971 36 13.52175852796836 24.418506505251226 34.60383683214161 27.455898134638808 37 12.30149638865108 23.321235213967903 38.94348449953577 25.433783897845245 38 12.159212858572582 24.90202934899256 34.61107158790831 28.327686204526547 39 16.585677595167184 21.713913641132 36.027877925554364 25.672530838146457 40 16.293875779243486 22.403627024224374 36.02546634029879 25.277030856233345 41 13.583253951985338 25.61103541412948 30.77665103155559 30.02905960232959 42 14.938564865614412 23.969951647715625 34.46637647257425 26.62510701409572 43 18.098947343035945 22.639962379270013 33.87071491444901 25.390375363245028 44 16.436159309321983 22.98723065607177 33.9237697900715 26.652840244534744 45 16.179325479604017 21.88875357216066 33.543945112319584 28.38797583591574 46 19.28665308140306 23.566011117408028 32.10302292211785 25.044312879071057 47 13.641131998118963 22.42171391364113 37.917354973291694 26.01979911494821 48 14.933741695103276 22.4988846418193 34.50496183666333 28.062411826414092 49 15.17731180591562 20.256110354141292 38.36952720871064 26.19705063123244 50 15.378679174755524 19.303534178192034 37.39283518020571 27.924951466846732 51 15.004883460142523 19.094932053585424 33.294346038368325 32.60583844790373 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 220.0 1 253.0 2 286.0 3 1884.0 4 3482.0 5 2405.5 6 1329.0 7 1109.0 8 889.0 9 872.5 10 856.0 11 863.0 12 870.0 13 853.5 14 837.0 15 810.0 16 783.0 17 772.5 18 762.0 19 802.0 20 842.0 21 867.5 22 893.0 23 871.0 24 849.0 25 935.5 26 1042.5 27 1063.0 28 1178.5 29 1294.0 30 1426.5 31 1559.0 32 1608.5 33 1658.0 34 1884.5 35 2111.0 36 2172.5 37 2234.0 38 2474.0 39 2714.0 40 3084.0 41 3454.0 42 4044.5 43 4635.0 44 6126.0 45 7617.0 46 9907.0 47 12197.0 48 11091.5 49 9986.0 50 8824.5 51 7663.0 52 5749.0 53 3835.0 54 3008.5 55 2182.0 56 1762.0 57 1342.0 58 1133.5 59 925.0 60 839.5 61 754.0 62 697.0 63 640.0 64 536.0 65 432.0 66 330.0 67 228.0 68 211.0 69 194.0 70 157.5 71 121.0 72 101.0 73 81.0 74 64.0 75 37.0 76 27.0 77 17.0 78 7.0 79 4.5 80 2.0 81 5.0 82 8.0 83 5.0 84 2.0 85 1.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 82933.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.96249984927591 #Duplication Level Percentage of deduplicated Percentage of total 1 86.69125504119127 60.65136917752885 2 7.707421322946469 10.784609262898966 3 2.6438247561269863 5.5490576730613865 4 1.1840336424114992 3.3135181411500847 5 0.6187308262383234 2.164397766872053 6 0.3309089655647858 1.3890731072070224 7 0.20854158767364103 1.021306355732941 8 0.12926131467374444 0.7234755766703242 9 0.10340905173899556 0.6511280190032918 >10 0.303333218434387 3.4690653901342046 >50 0.04136362069559822 2.140281914316376 >100 0.03274619971734859 4.913604958219286 >500 0.003446968391299852 1.6567590705750423 >1k 0.001723484195649926 1.5723535866301714 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1304 1.5723535866301714 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 775 0.9344892865325022 No Hit GAATCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTC 599 0.7222697840425404 No Hit GAATCTATCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTC 418 0.5040213184136593 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCG 402 0.4847286363691173 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGC 356 0.42926217549105905 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCG 309 0.372589921985217 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 284 0.34244510629062014 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGC 269 0.324358216873862 No Hit CCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGC 251 0.3026539495737523 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGC 207 0.24959907395126188 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGCT 192 0.23151218453450378 TruSeq Adapter, Index 16 (95% over 22bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 179 0.2158368803733134 No Hit CCTGTCACTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGC 178 0.21463108774552953 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCACTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGC 154 0.18569206467871655 TruSeq Adapter, Index 13 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCT 147 0.17725151628422944 No Hit CTGTCTATTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGCT 133 0.1603704194952552 TruSeq Adapter, Index 16 (95% over 22bp) CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 133 0.1603704194952552 No Hit GAACTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCT 127 0.15313566372855197 No Hit GAATATGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTC 119 0.14348932270628098 No Hit CGCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTG 114 0.1374603595673616 No Hit GAATGAATGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCT 103 0.124196640661739 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCT 99 0.1193734701506035 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCG 98 0.11816767752281963 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 95 0.114550299639468 No Hit CGTTTCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTT 95 0.114550299639468 No Hit GAATCTATCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTT 91 0.1097271291283325 No Hit GAATGCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTT 90 0.10852133650054864 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTC 88 0.1061097512449809 No Hit GAATGAACTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTC 83 0.10008078810606151 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.41599845658543644 0.0 2 0.0 0.0 0.0 1.5590898677245488 0.0 3 0.0 0.0 0.0 2.084815453438318 0.0 4 0.0 0.0 0.0 2.797438896458587 0.0 5 0.0 0.0 0.0 5.082415926109028 0.0 6 0.0 0.0 0.0 6.531778664705244 0.0 7 0.0 0.0 0.0 8.011286218996057 0.0 8 0.0 0.0 0.0 10.800284567060157 0.0 9 0.0 0.0 0.0 11.801092448120773 0.0 10 0.0 0.0 0.0 15.054320957881664 0.0 11 0.0 0.0 0.0 17.8107629049956 0.0 12 0.0 0.0 0.0 20.85177191226653 0.0 13 0.0 0.0 0.0 21.95145478880542 0.0 14 0.0 0.0 0.0 22.387951720063185 0.0 15 0.0 0.0 0.0 23.06560717687772 0.0 16 0.0 0.0 0.0 24.42574126101793 0.0 17 0.0 0.0 0.0 26.002918018159235 0.0 18 0.0 0.0 0.0 27.660882881362063 0.0 19 0.0 0.0 0.0 28.605018508916835 0.0 20 0.0 0.0 0.0 29.516597735521444 0.0 21 0.0 0.0 0.0 30.680187621332884 0.0 22 0.0 0.0 0.0 31.717169281227015 0.0 23 0.0 0.0 0.0 32.82046953564926 0.0 24 0.0 0.0 0.0 33.53671035655288 0.0 25 0.0 0.0 0.0 34.31685818672905 0.0 26 0.0 0.0 0.0 34.99210205828802 0.0 27 0.0 0.0 0.0 35.64443586991909 0.0 28 0.0 0.0 0.0 36.3317376677559 0.0 29 0.0 0.0 0.0 37.0347147697539 0.0 30 0.0 0.0 0.0 37.71357601919622 0.0 31 0.0 0.0 0.0 38.33938239301605 0.0 32 0.0 0.0 0.0 38.98448144888042 0.0 33 0.0 0.0 0.0 39.59220093328349 0.0 34 0.0 0.0 0.0 40.155306090458566 0.0 35 0.0 0.0 0.0 40.73167496653925 0.0 36 0.0 0.0 0.0 41.22122677341951 0.0 37 0.0 0.0 0.0 41.691485898255216 0.0 38 0.0 0.0 0.0 42.2087709355745 0.0 39 0.0 0.0 0.0 42.682647438293564 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTCA 25 3.8594633E-5 45.000004 1 GTATGGG 20 6.995433E-4 45.000004 3 GGGTCCA 20 6.995433E-4 45.000004 7 TAGGACG 20 6.995433E-4 45.000004 11 ATCTTAT 20 6.995433E-4 45.000004 7 TAGGAAC 20 6.995433E-4 45.000004 6 TTACTGG 25 3.8594633E-5 45.000004 40 ATCTATC 50 2.1827873E-11 45.000004 3 GCAGGGC 25 3.8594633E-5 45.000004 4 AGGGCGA 25 3.8594633E-5 45.000004 6 GGCGATG 20 6.995433E-4 45.000004 8 AGGAAAC 20 6.995433E-4 45.000004 7 TATTGGG 20 6.995433E-4 45.000004 3 GAATGCT 20 6.995433E-4 45.000004 1 AGGGATT 50 2.1827873E-11 45.000004 6 TATCTTA 20 6.995433E-4 45.000004 6 AGAGCGG 25 3.8594633E-5 45.000004 2 ACTTACT 25 3.8594633E-5 45.000004 38 CTTACTG 25 3.8594633E-5 45.000004 39 GAATCTA 50 2.1827873E-11 45.000004 1 >>END_MODULE