SRR2936191.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936191.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	94335
Sequences flagged as poor quality	0
Sequence length	51
%GC	35

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3083	3.268140138866805	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1863	1.974876768961679	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	673	0.7134149573329093	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	295	0.3127153230508295	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTGCATACTCGTATGCCGTCTTC	135	0.14310701224359992	No Hit
CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	129	0.13674670058832883	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTGCATACTCGTATGCCG	119	0.12614618116287699	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	117	0.12402607727778663	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTATT	360	0.0	45.000004	1
TAATCAA	55	1.8189894E-12	45.0	13
TTAGGAT	20	7.0003583E-4	45.0	5
GGTACCT	20	7.0003583E-4	45.0	8
CAACGCA	55	1.8189894E-12	45.0	17
GCTATTA	20	7.0003583E-4	45.0	1
TCAGGGC	25	3.863537E-5	45.0	4
ATCAACG	55	1.8189894E-12	45.0	15
GATATAG	20	7.0003583E-4	45.0	2
CGCACTT	50	2.1827873E-11	45.0	35
TGGGCGA	25	3.863537E-5	45.0	6
TAGGATA	20	7.0003583E-4	45.0	6
CGCAAGC	55	1.8189894E-12	45.0	20
TAATGGG	25	3.863537E-5	45.0	3
CCGCACT	50	2.1827873E-11	45.0	34
TCAACGC	55	1.8189894E-12	45.0	16
TACGGCT	30	2.1442975E-6	44.999996	7
ACAGGGT	30	2.1442975E-6	44.999996	5
ACGGCTG	30	2.1442975E-6	44.999996	8
GCGGGGT	30	2.1442975E-6	44.999996	5