SRR2936189.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936189.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	91455
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2087	2.281996610354819	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1158	1.266196490077087	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	461	0.5040730413864742	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	224	0.24492920015308076	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCG	144	0.15745448581269478	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGC	111	0.12137116614728556	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	106	0.11590399650101144	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCG	98	0.10715652506697283	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTC	94	0.10278278934995352	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTGCTCA	20	6.99924E-4	45.000004	45
CTGTCAC	40	6.697519E-9	45.000004	2
CATATGG	20	6.99924E-4	45.000004	2
CACATCC	20	6.99924E-4	45.000004	45
CATTGCT	20	6.99924E-4	45.000004	22
GGATCCT	20	6.99924E-4	45.000004	8
AGGGTCT	20	6.99924E-4	45.000004	6
CACGAGC	20	6.99924E-4	45.000004	41
AGACGGG	20	6.99924E-4	45.000004	3
ACCTAGG	20	6.99924E-4	45.000004	3
ACGGCTG	30	2.143579E-6	45.000004	8
ACAATTC	20	6.99924E-4	45.000004	35
CGCAGGG	40	6.697519E-9	45.000004	4
AAGGGTC	20	6.99924E-4	45.000004	5
AAGGATC	20	6.99924E-4	45.000004	6
CTAGGAA	30	2.143579E-6	45.000004	5
CGGTTTT	75	0.0	45.0	1
ATATGGG	55	1.8189894E-12	45.0	3
GCGCAGG	35	1.1956035E-7	45.0	3
CGATGGT	25	3.8626138E-5	45.0	10