SRR2936185.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936185.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	452572
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9491	2.097124877367579	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5494	1.2139504874362532	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2052	0.45340851842358787	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	905	0.19996818185835627	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	604	0.13345942745021788	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTC	463	0.10230416375736899	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGGA	25	3.887044E-5	45.000004	29
GTCCGAC	25	3.887044E-5	45.000004	26
TAATCGT	20	7.0287473E-4	45.000004	21
CGTTTTA	2045	0.0	44.449883	1
CGTTATT	975	0.0	43.846153	1
CGTTTTT	4015	0.0	43.038605	1
GTTTTAT	2275	0.0	41.142857	2
GTTATTT	1070	0.0	40.58411	2
ACACGAC	50	1.0786607E-9	40.500004	26
CGGTTTT	325	0.0	38.076923	1
AAGGCGA	215	0.0	37.67442	6
CGTTGAT	30	1.1388287E-4	37.499996	25
TATGCGG	30	1.1388287E-4	37.499996	2
TGGCACG	30	1.1388287E-4	37.499996	1
GCGATAT	30	1.1388287E-4	37.499996	9
AGTACGG	30	1.1388287E-4	37.499996	2
AGGCGAT	325	0.0	37.384617	7
CGGTTTA	115	0.0	37.173916	1
CATACGA	85	0.0	37.058823	18
TTAATCG	25	0.0021057616	36.000004	20