##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936185.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 452572 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.749381313912483 31.0 31.0 34.0 30.0 34.0 2 31.92952281625907 33.0 31.0 34.0 30.0 34.0 3 31.078257161291464 31.0 31.0 34.0 27.0 34.0 4 35.273324465499414 37.0 35.0 37.0 33.0 37.0 5 31.80951981121236 37.0 35.0 37.0 0.0 37.0 6 33.792044138833155 37.0 35.0 37.0 17.0 37.0 7 21.12369744482646 32.0 0.0 37.0 0.0 37.0 8 28.275730712461222 35.0 17.0 37.0 17.0 37.0 9 34.89359262172649 37.0 32.0 39.0 32.0 39.0 10 36.38672741574821 37.0 35.0 39.0 32.0 39.0 11 36.82582439921162 39.0 37.0 39.0 33.0 39.0 12 37.169495682454944 39.0 37.0 39.0 34.0 39.0 13 36.99975252556499 39.0 37.0 39.0 33.0 39.0 14 38.41251999681818 40.0 38.0 41.0 34.0 41.0 15 38.55341470528446 40.0 38.0 41.0 34.0 41.0 16 38.61671954959653 40.0 38.0 41.0 34.0 41.0 17 38.568581352801324 40.0 38.0 41.0 34.0 41.0 18 38.3413976118717 40.0 38.0 41.0 34.0 41.0 19 38.132772243974436 40.0 37.0 41.0 34.0 41.0 20 37.94637317377124 40.0 36.0 41.0 34.0 41.0 21 37.82018330784936 40.0 36.0 41.0 33.0 41.0 22 37.697272478191316 39.0 35.0 41.0 33.0 41.0 23 37.558772968721 39.0 35.0 41.0 33.0 41.0 24 37.33245759790707 39.0 35.0 41.0 33.0 41.0 25 37.18148051580743 39.0 35.0 41.0 33.0 41.0 26 37.05065934260184 39.0 35.0 40.0 33.0 41.0 27 36.973297066544106 39.0 35.0 40.0 33.0 41.0 28 36.87826688350141 39.0 35.0 40.0 33.0 41.0 29 36.81184209363372 39.0 35.0 40.0 33.0 41.0 30 36.60423534818769 38.0 35.0 40.0 32.0 41.0 31 36.37161379846743 38.0 35.0 40.0 31.0 41.0 32 36.05319595556066 38.0 35.0 40.0 30.0 41.0 33 35.59674261774922 38.0 35.0 40.0 26.0 41.0 34 35.06348824054515 38.0 34.0 40.0 23.0 41.0 35 34.57039321920048 38.0 34.0 40.0 20.0 41.0 36 34.19808560847777 38.0 33.0 40.0 18.0 41.0 37 33.993373430084056 38.0 33.0 40.0 15.0 41.0 38 33.787576341444016 38.0 33.0 40.0 15.0 41.0 39 33.644823365122015 38.0 33.0 40.0 15.0 41.0 40 33.48798865152948 38.0 33.0 40.0 12.0 41.0 41 33.33478650910794 38.0 33.0 40.0 12.0 41.0 42 33.209347904863755 38.0 33.0 40.0 10.0 41.0 43 33.11168609635594 38.0 33.0 40.0 10.0 41.0 44 32.94341894770335 37.0 32.0 40.0 10.0 41.0 45 32.86608097717048 37.0 32.0 40.0 10.0 41.0 46 32.756723792015414 37.0 32.0 40.0 10.0 41.0 47 32.69406856809524 37.0 31.0 40.0 10.0 41.0 48 32.59971893974881 37.0 31.0 40.0 10.0 41.0 49 32.475933111195566 36.0 31.0 40.0 10.0 41.0 50 32.34457500684974 36.0 31.0 40.0 10.0 41.0 51 30.768646756759146 35.0 27.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 27.0 10 32.0 11 20.0 12 14.0 13 16.0 14 17.0 15 24.0 16 54.0 17 104.0 18 218.0 19 428.0 20 775.0 21 1354.0 22 2501.0 23 4538.0 24 7329.0 25 10899.0 26 13352.0 27 13436.0 28 12273.0 29 10950.0 30 11183.0 31 12621.0 32 15763.0 33 22491.0 34 29688.0 35 38196.0 36 46637.0 37 75481.0 38 74290.0 39 47847.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.52157888689534 18.338739471288545 21.451393369452816 25.68828827236329 2 43.349345518503135 20.685106458198916 21.777529321301362 14.188018701996588 3 28.051890085997368 21.363009642664593 36.67946757642982 13.905632694908213 4 23.379263410020947 22.188734610183573 38.18154901319569 16.25045296659979 5 19.35139602096462 33.59487551152082 32.58796390408598 14.465764563428582 6 22.10388623246688 29.608327514737987 36.510433698947345 11.777352553847784 7 40.93094579426036 41.80771236399954 14.803390399759596 2.4579514419805024 8 71.10890642814844 4.80741185932846 21.355717985204564 2.727963727318526 9 65.91304808958574 6.367826555774552 22.892931953368745 4.826193401270959 10 34.5061117347074 24.33226094411497 29.31378874521623 11.847838575961395 11 26.1198218184068 23.259945378856845 35.73685513023342 14.88337767250294 12 23.10085467063804 21.458464067595877 39.32412964125046 16.116551620515633 13 21.221816639120405 21.620206287618323 40.62226562845249 16.535711444808783 14 18.633278240810302 23.37373942709668 40.457429977992454 17.535552354100563 15 18.025861078458234 22.770299532450085 42.11042662824921 17.093412760842476 16 21.463546131886197 22.256348161176565 39.83233607028274 16.4477696366545 17 22.174151295263517 21.787914409198976 38.92706574865436 17.110868546883147 18 22.7199208081808 21.861935780384115 38.90894708466277 16.509196326772315 19 21.92645590093952 23.44312065262544 37.62539441238079 17.00502903405425 20 22.948834660562298 23.259945378856845 37.51690338774824 16.27431657283261 21 22.44438453991851 23.263922646562314 38.863208506049865 15.42848430746931 22 22.41698558461416 20.89678548385671 39.17365634639351 17.512572585135626 23 20.617050988571982 22.856694625385572 39.49139584419717 17.034858541845274 24 20.09801755300814 22.23137975835889 40.091963267723145 17.578639420909823 25 20.55982252547661 23.2685627922187 38.36516620559823 17.806448476706468 26 20.29091503672344 23.212439125708176 37.965450801198486 18.531195036369905 27 19.804583580071235 23.311870818344925 38.89878295608213 17.98476264550171 28 18.491201399998232 24.20255782505325 39.318384699009215 17.9878560759393 29 19.494135739727604 23.533713972583367 39.04196459347905 17.93018569420998 30 20.695712505413503 22.678380456590332 39.095657707502895 17.53024933049327 31 21.558337678866568 22.980210883572116 38.26153628593904 17.19991515162228 32 21.62352067737288 23.282704188504812 37.901593558593994 17.192181575528316 33 20.91932333418771 23.673139301591792 36.955445763326054 18.452091600894445 34 20.090946854865084 24.43434414855537 37.95263516081419 17.522073835765358 35 20.18507552389454 25.405018428007036 36.15049097160231 18.259415076496115 36 21.08194939147804 27.047850949683145 34.006522719036965 17.86367693980184 37 20.607991656576193 27.074587027036586 33.65166205598225 18.665759260404975 38 20.95953792987635 27.33001599745455 32.97442174946749 18.73602432320161 39 21.232643645651965 26.54737809674483 32.88714281926411 19.332835438339092 40 22.34649956250055 25.685857719876616 33.202893683215045 18.764749034407785 41 20.226173956851063 26.451039834545664 33.29017261341842 20.032613595184852 42 21.153982128810444 26.025030271426424 33.190519961464695 19.630467638298438 43 21.154865966078326 26.41502346587946 32.44677090054179 19.98333966750042 44 20.70676047126203 26.893400387120725 32.56874044350954 19.831098698107706 45 20.724437216619677 26.242012320691515 32.42666360269747 20.606886859991338 46 20.772385388402288 26.51246652466348 32.45914462229214 20.256003464642088 47 20.261527447566355 26.77319851868874 33.632217636088846 19.333056397656065 48 20.946059411541146 26.383647242869646 33.31867636530762 19.35161698028159 49 20.89170341956639 26.074525158427832 33.97492553671018 19.0588458852956 50 19.656761797017932 26.45457518361719 33.91416172454328 19.974501294821597 51 20.062222143658907 25.95631192384858 33.20797574750537 20.77349018498714 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 805.0 1 1058.0 2 1311.0 3 14162.5 4 27014.0 5 18186.0 6 9358.0 7 8057.0 8 6756.0 9 6465.0 10 6174.0 11 5961.5 12 5749.0 13 5490.0 14 5231.0 15 4949.0 16 4667.0 17 4426.5 18 4186.0 19 3919.0 20 3652.0 21 3706.0 22 3760.0 23 3919.0 24 4078.0 25 4278.0 26 5165.0 27 5852.0 28 6598.5 29 7345.0 30 8117.0 31 8889.0 32 10476.5 33 12064.0 34 13372.5 35 14681.0 36 15406.0 37 16131.0 38 16858.5 39 17586.0 40 18781.0 41 19976.0 42 21282.0 43 22588.0 44 23445.5 45 24303.0 46 25855.0 47 27407.0 48 26951.0 49 26495.0 50 25974.5 51 25454.0 52 24487.0 53 23520.0 54 22771.5 55 22023.0 56 20793.0 57 19563.0 58 18524.0 59 17485.0 60 16517.0 61 15549.0 62 13824.0 63 12099.0 64 10476.5 65 8854.0 66 7493.0 67 6132.0 68 5170.5 69 4209.0 70 3530.5 71 2852.0 72 2348.0 73 1844.0 74 1453.0 75 846.5 76 631.0 77 480.5 78 330.0 79 276.0 80 222.0 81 168.0 82 114.0 83 77.0 84 40.0 85 30.0 86 20.0 87 17.5 88 15.0 89 14.0 90 13.0 91 8.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 452572.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.07118979567972 #Duplication Level Percentage of deduplicated Percentage of total 1 73.60704508466641 33.911641443948206 2 8.82754444301333 8.1339095092773 3 4.4401156193917295 6.136842282472752 4 3.0063626715101415 5.540268209351618 5 2.1119536540585 4.865010881790423 6 1.6955145225015764 4.686862282050084 7 1.3209566547205016 4.260063132604609 8 1.0997804294491962 4.053455431898246 9 0.8439092340139689 3.499191224152583 >10 3.0083636955392903 18.90626066797438 >50 0.026310625513672966 0.8277666593840743 >100 0.00961349778383395 0.8555065164566592 >500 0.0010119471351404158 0.3517600363305446 >1k 5.059735675702079E-4 0.47833770347930915 >5k 0.0010119471351404158 3.4931240188291657 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9491 2.097124877367579 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5494 1.2139504874362532 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2052 0.45340851842358787 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 905 0.19996818185835627 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 604 0.13345942745021788 No Hit GAATCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTC 463 0.10230416375736899 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.016571948772791955 0.0 2 0.0 0.0 0.0 0.08065015069425417 0.0 3 0.0 0.0 0.0 0.12152762433380766 0.0 4 0.0 0.0 0.0 0.1957699548359156 0.0 5 0.0 0.0 0.0 0.4085537770785643 0.0 6 0.0 0.0 0.0 0.5570384380827802 0.0 7 0.0 0.0 0.0 0.7112680413282306 0.0 8 0.0 0.0 0.0 1.055080738534421 0.0 9 0.0 0.0 0.0 1.2442219138612198 0.0 10 0.0 0.0 0.0 1.6417277250912563 0.0 11 0.0 0.0 0.0 1.867990065669109 0.0 12 0.0 0.0 0.0 2.1455149677841314 0.0 13 0.0 0.0 0.0 2.2487029688093827 0.0 14 0.0 0.0 0.0 2.3070362284896104 0.0 15 0.0 0.0 0.0 2.3711144304110725 0.0 16 0.0 0.0 0.0 2.4508807438374447 0.0 17 0.0 0.0 0.0 2.5496495585232846 0.0 18 0.0 0.0 0.0 2.667199915151622 0.0 19 0.0 0.0 0.0 2.737023059314319 0.0 20 0.0 0.0 0.0 2.8101605932315743 0.0 21 0.0 0.0 0.0 2.895671848899181 0.0 22 0.0 0.0 0.0 3.000406565143226 0.0 23 0.0 0.0 0.0 3.0974077052933016 0.0 24 0.0 0.0 0.0 3.1796045712063497 0.0 25 0.0 0.0 0.0 3.2668835014097204 0.0 26 0.0 0.0 0.0 3.3420096691797108 0.0 27 0.0 0.0 0.0 3.4319401111867283 0.0 28 0.0 0.0 0.0 3.517451366854335 0.0 29 0.0 0.0 0.0 3.6148944256383513 0.0 30 0.0 0.0 0.0 3.7350962940703356 2.2095931697055937E-4 31 0.0 0.0 0.0 3.8389471730464986 2.2095931697055937E-4 32 0.0 0.0 0.0 3.95008970948269 2.2095931697055937E-4 33 0.0 0.0 0.0 4.054382507092794 2.2095931697055937E-4 34 0.0 0.0 0.0 4.174142456890837 2.2095931697055937E-4 35 0.0 0.0 0.0 4.296774877809498 2.2095931697055937E-4 36 2.2095931697055937E-4 0.0 0.0 4.416976746241482 2.2095931697055937E-4 37 2.2095931697055937E-4 0.0 0.0 4.5475637025710824 2.2095931697055937E-4 38 2.2095931697055937E-4 0.0 0.0 4.698478916061974 2.2095931697055937E-4 39 2.2095931697055937E-4 0.0 0.0 4.9112627383046235 2.2095931697055937E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGGA 25 3.887044E-5 45.000004 29 GTCCGAC 25 3.887044E-5 45.000004 26 TAATCGT 20 7.0287473E-4 45.000004 21 CGTTTTA 2045 0.0 44.449883 1 CGTTATT 975 0.0 43.846153 1 CGTTTTT 4015 0.0 43.038605 1 GTTTTAT 2275 0.0 41.142857 2 GTTATTT 1070 0.0 40.58411 2 ACACGAC 50 1.0786607E-9 40.500004 26 CGGTTTT 325 0.0 38.076923 1 AAGGCGA 215 0.0 37.67442 6 CGTTGAT 30 1.1388287E-4 37.499996 25 TATGCGG 30 1.1388287E-4 37.499996 2 TGGCACG 30 1.1388287E-4 37.499996 1 GCGATAT 30 1.1388287E-4 37.499996 9 AGTACGG 30 1.1388287E-4 37.499996 2 AGGCGAT 325 0.0 37.384617 7 CGGTTTA 115 0.0 37.173916 1 CATACGA 85 0.0 37.058823 18 TTAATCG 25 0.0021057616 36.000004 20 >>END_MODULE