##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936184.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 45514 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.269565408445754 31.0 31.0 33.0 28.0 34.0 2 31.413059717889002 31.0 31.0 34.0 30.0 34.0 3 30.707584479500813 31.0 30.0 34.0 26.0 34.0 4 34.900294414905304 35.0 35.0 37.0 32.0 37.0 5 31.61405281891286 35.0 35.0 37.0 10.0 37.0 6 33.53317660500066 35.0 35.0 37.0 19.0 37.0 7 21.18906270598058 32.0 0.0 37.0 0.0 37.0 8 28.115019554422815 35.0 17.0 37.0 17.0 37.0 9 34.258469921342886 35.0 32.0 39.0 28.0 39.0 10 35.8345564002285 37.0 35.0 39.0 32.0 39.0 11 36.3596475809641 37.0 35.0 39.0 32.0 39.0 12 36.73728962517028 39.0 35.0 39.0 33.0 39.0 13 36.455310453926266 39.0 35.0 39.0 32.0 39.0 14 37.63683701718153 39.0 37.0 41.0 33.0 41.0 15 37.77868348200553 40.0 37.0 41.0 33.0 41.0 16 37.87834512457705 40.0 37.0 41.0 33.0 41.0 17 37.80177527793646 40.0 37.0 41.0 33.0 41.0 18 37.63696884475107 39.0 36.0 40.0 33.0 41.0 19 37.47394208375445 39.0 36.0 40.0 32.0 41.0 20 37.26422639187942 39.0 35.0 40.0 32.0 41.0 21 37.20143252625566 39.0 35.0 40.0 32.0 41.0 22 37.14386782089028 39.0 35.0 40.0 32.0 41.0 23 37.06477127916685 38.0 35.0 40.0 33.0 41.0 24 36.81570505778442 38.0 35.0 40.0 32.0 41.0 25 36.66750889836094 38.0 35.0 40.0 32.0 41.0 26 36.49850595421189 38.0 35.0 40.0 31.0 41.0 27 36.433756646306634 38.0 35.0 40.0 31.0 41.0 28 36.39253855956409 38.0 35.0 40.0 31.0 41.0 29 36.24355143472338 38.0 35.0 40.0 31.0 41.0 30 35.96910840620468 38.0 34.0 40.0 30.0 41.0 31 35.7882849233203 38.0 34.0 40.0 30.0 41.0 32 35.48426857670167 38.0 34.0 40.0 28.0 41.0 33 35.10827437711473 38.0 34.0 40.0 25.0 41.0 34 34.76462187458804 38.0 33.0 40.0 24.0 41.0 35 34.13958342488026 37.0 33.0 40.0 21.0 41.0 36 33.733378740607286 37.0 33.0 40.0 18.0 41.0 37 33.47271169310542 37.0 33.0 40.0 18.0 41.0 38 33.124577053214395 37.0 32.0 40.0 15.0 41.0 39 33.019949905523575 37.0 32.0 40.0 15.0 41.0 40 32.84268576701674 37.0 31.0 40.0 15.0 41.0 41 32.571340686382214 36.0 31.0 40.0 13.0 41.0 42 32.42549545194885 36.0 31.0 40.0 12.0 41.0 43 32.223579557938216 36.0 30.0 40.0 12.0 41.0 44 32.07854726018368 36.0 30.0 40.0 10.0 41.0 45 31.94617040910489 35.0 30.0 40.0 10.0 41.0 46 31.633651184251 35.0 29.0 40.0 10.0 41.0 47 31.493298765215098 35.0 28.0 39.0 10.0 41.0 48 31.300918398734456 35.0 28.0 39.0 10.0 41.0 49 31.109834336687612 35.0 27.0 39.0 8.0 41.0 50 30.853297886364636 35.0 27.0 39.0 8.0 41.0 51 28.50384497077822 33.0 21.0 38.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 1.0 12 2.0 13 0.0 14 1.0 15 2.0 16 10.0 17 14.0 18 17.0 19 41.0 20 106.0 21 178.0 22 269.0 23 499.0 24 722.0 25 1077.0 26 1366.0 27 1495.0 28 1424.0 29 1429.0 30 1594.0 31 1913.0 32 2386.0 33 2959.0 34 3737.0 35 4501.0 36 4630.0 37 6504.0 38 5463.0 39 3170.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.43054884211451 18.44487410467109 21.463725447115173 23.66085160609922 2 39.72404095443161 27.606890187634576 18.486619501691788 14.182449356242035 3 25.730544447862197 26.706068462451114 33.67535263874852 13.888034450938171 4 24.111262468690953 20.34978248451026 39.91079667794525 15.62815836885354 5 21.219844443467945 30.660895548622403 30.98167596783407 17.13758404007558 6 19.620336599727555 32.04069077646439 36.90732521861405 11.431647405194006 7 37.28742804411829 41.71463725447116 17.57700927187239 3.4209254295381646 8 59.656369468734894 9.66515797337083 24.878059498176384 5.800413059717889 9 53.84497077822209 8.891769565408445 25.638265149184864 11.624994507184603 10 32.06485916421321 21.06165136002109 33.02720042184822 13.846289053917477 11 23.531221162719163 21.518653601089774 37.05672979742497 17.893395438766095 12 22.333787406072858 18.473436744737885 41.88381596871292 17.308959880476337 13 18.649206837456607 20.91444390736916 45.80129191018148 14.635057344992749 14 15.393065869842246 25.038449707782224 41.74759414685591 17.82089027551962 15 14.186843608560004 22.656764951443513 47.717185920815574 15.439205519180913 16 16.983785208946696 23.65426022762227 40.42272707298853 18.9392274904425 17 16.313661730456563 22.61941380674078 39.59880476336951 21.468119699433142 18 17.475941468559125 23.78608779716131 41.286197653469266 17.4517730808103 19 16.900294414905304 25.389989893219667 37.77738717757174 19.93232851430329 20 16.304873225820625 26.793953508810475 40.299688008085425 16.601485257283475 21 16.768466845366262 26.895021312123742 40.72593048292833 15.61058135958167 22 14.839390077778267 22.95996836138331 39.22089906402426 22.97974249681417 23 14.437315990684185 26.088676011776595 40.93026321571385 18.54374478182537 24 18.152656325526213 23.766313661730457 37.94876301797249 20.132266994770838 25 16.55095135562684 27.50142813200334 35.96915234872786 19.978468163641956 26 15.27661818341609 24.069517071670255 38.326668717317744 22.327196027595907 27 17.548446631805596 24.37711473392802 37.53350617392451 20.540932460341875 28 13.554071274772598 23.232412005097334 40.01625873357648 23.197257986553588 29 20.132266994770838 22.397504064683392 36.88095970470624 20.58926923583952 30 17.370479412927892 23.52243265808323 38.21241815705058 20.894669771938304 31 18.227358614931667 22.80177527793646 36.303115524893435 22.667750582238433 32 19.473129147075625 22.667750582238433 37.21492288087182 20.644197389814124 33 16.082963483763237 21.988838599112363 37.9619457749264 23.966252142198005 34 17.746187986114162 21.11438238783671 40.50841499318891 20.63101463286022 35 15.896207760249592 22.371138550775584 36.12075405369776 25.61189963527706 36 18.387748824537507 25.376807136265768 34.795886979830385 21.439557059366347 37 14.980006151953246 23.57296655973986 38.92428703256141 22.522740255745486 38 15.329349211231708 25.475677813420045 35.63958342488026 23.555389550467986 39 17.62534604737004 22.98633387529112 39.04293184514655 20.345388232192292 40 18.310849408973063 21.485696708705014 39.00997495276179 21.193478929560136 41 15.795139956936326 26.209517950520716 34.96506569407216 23.0302763984708 42 17.453970206969284 23.825636068023027 36.67442984576174 22.045963879245946 43 18.991958518258116 24.13762798259876 34.73217032121985 22.138243177923275 44 18.57450454805115 22.990728127609085 34.894757656984666 23.5400096673551 45 18.18781034406996 21.518653601089774 34.69921342883509 25.594322626005184 46 21.50547084413587 23.59933207364767 33.152436612910314 21.74276046930615 47 15.40624862679615 23.65865447994024 39.497736960056244 21.437359933207365 48 17.02113635364943 24.686909522344774 34.354264621874584 23.937689502131214 49 17.124401283121678 22.221733971964667 38.210221030891596 22.44364371402206 50 16.79483235927407 20.778222085512148 37.966340027244364 24.460605527969417 51 16.5839082480116 21.063848486180074 34.3806301357824 27.971613130025926 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 228.0 1 232.5 2 237.0 3 1572.5 4 2908.0 5 1872.0 6 836.0 7 682.5 8 529.0 9 529.0 10 529.0 11 520.0 12 511.0 13 471.5 14 432.0 15 405.5 16 379.0 17 370.0 18 361.0 19 357.5 20 354.0 21 364.5 22 375.0 23 395.0 24 415.0 25 462.5 26 565.5 27 621.0 28 684.0 29 747.0 30 796.5 31 846.0 32 921.0 33 996.0 34 1100.5 35 1205.0 36 1210.5 37 1216.0 38 1278.5 39 1341.0 40 1551.0 41 1761.0 42 2034.5 43 2308.0 44 2860.0 45 3412.0 46 4443.5 47 5475.0 48 4850.0 49 4225.0 50 3913.0 51 3601.0 52 3010.5 53 2420.0 54 2073.0 55 1726.0 56 1543.5 57 1361.0 58 1210.5 59 1060.0 60 932.5 61 805.0 62 715.5 63 626.0 64 505.0 65 384.0 66 339.0 67 294.0 68 245.5 69 197.0 70 164.5 71 132.0 72 103.0 73 74.0 74 55.0 75 29.5 76 23.0 77 15.5 78 8.0 79 5.5 80 3.0 81 3.0 82 3.0 83 2.5 84 2.0 85 1.5 86 1.0 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 45514.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 73.69380849848397 #Duplication Level Percentage of deduplicated Percentage of total 1 88.23231269192928 65.02175154897394 2 7.537044214543395 11.108669859823351 3 2.1853850511314508 4.831480423605924 4 0.9808890611490415 2.8914180252230084 5 0.369696789004502 1.3622182185701102 6 0.24745833457559407 1.0941688271740564 7 0.10136847440446022 0.5229160258382036 8 0.04472138576667362 0.26365513907808585 9 0.04173996004889538 0.27683789603199016 >10 0.20273694880892043 2.8892208990640245 >50 0.023851405742225933 1.118337214922881 >100 0.026832831460004175 4.6666959616821195 >500 0.0029814257177782416 1.4303291294986158 >1k 0.0029814257177782416 2.5223008305136885 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1148 2.5223008305136885 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 651 1.4303291294986158 No Hit GAATCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTC 318 0.6986861185569275 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCG 303 0.6657292261721668 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 288 0.632772333787406 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGC 287 0.6305752076284221 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCG 231 0.5075361427253152 No Hit GAATCTATCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTC 202 0.44381948411477784 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 198 0.4350309794788417 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGC 180 0.3954827086171288 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 117 0.25706376060113373 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 90 0.1977413543085644 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCT 71 0.15599595728786747 No Hit GAATATGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTC 66 0.14501032649294723 No Hit CCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTCTGC 60 0.13182756953904293 No Hit GAATGAACTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTC 59 0.12963044338005889 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCG 57 0.1252361910620908 No Hit GAACTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTCT 54 0.11864481258513865 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTC 52 0.11425056026717054 No Hit GAATCTGTCTCTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTT 48 0.10546205563123434 No Hit CCTGTCACTTATACACATCTGACGCGCCTTTCATCGTATGCCGTCTTCTGC 48 0.10546205563123434 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07030803708748956 0.0 2 0.0 0.0 0.0 0.6173924506745178 0.0 3 0.0 0.0 0.0 0.8283165619369864 0.0 4 0.0 0.0 0.0 1.2347849013490355 0.0 5 0.0 0.0 0.0 3.108933514962429 0.0 6 0.0 0.0 0.0 3.8317880212681814 0.0 7 0.0 0.0 0.0 4.756778134200466 0.0 8 0.0 0.0 0.0 6.608955486224019 0.0 9 0.0 0.0 0.0 7.19558817067276 0.0 10 0.0 0.0 0.0 10.049655051193039 0.0 11 0.0 0.0 0.0 12.178670299248584 0.0 12 0.0 0.0 0.0 14.839390077778265 0.0 13 0.0 0.0 0.0 15.55785033176605 0.0 14 0.0 0.0 0.0 15.900602012567562 0.0 15 0.0 0.0 0.0 16.603682383442457 0.0 16 0.0 0.0 0.0 17.515489739420836 0.0 17 0.0 0.0 0.0 18.44047985235312 0.0 18 0.0 0.0 0.0 19.56760557191194 0.0 19 0.0 0.0 0.0 20.23553192424309 0.0 20 0.0 0.0 0.0 20.93421804280002 0.0 21 0.0 0.0 0.0 21.670255306059673 0.0 22 0.0 0.0 0.0 22.43485520938612 0.0 23 0.0 0.0 0.0 23.24779188821022 0.0 24 0.0 0.0 0.0 23.76851078788944 0.0 25 0.0 0.0 0.0 24.309003822999518 0.0 26 0.0 0.0 0.0 24.840708353473655 0.0 27 0.0 0.0 0.0 25.405369776332556 0.0 28 0.0 0.0 0.0 25.937074306806696 0.0 29 0.0 0.0 0.0 26.532495495891375 0.0 30 0.0 0.0 0.0 27.1762534604737 0.0 31 0.0 0.0 0.0 27.758491892604475 0.0 32 0.0 0.0 0.0 28.301182053873532 0.0 33 0.0 0.0 0.0 28.79333831348596 0.0 34 0.0 0.0 0.0 29.292085951575338 0.0 35 0.0 0.0 0.0 29.889704266819002 0.0 36 0.0 0.0 0.0 30.381860526431428 0.0 37 0.0 0.0 0.0 30.81030012743332 0.0 38 0.0 0.0 0.0 31.42988970426682 0.0 39 0.0 0.0 0.0 32.165926967526474 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGAC 20 6.962015E-4 45.000004 5 CGTTATT 40 6.5701897E-9 45.000004 1 AGCTCGC 20 6.962015E-4 45.000004 19 AATTCGA 20 6.962015E-4 45.000004 13 GTATCTT 20 6.962015E-4 45.000004 5 TTCGAGC 20 6.962015E-4 45.000004 15 GAGCTCG 20 6.962015E-4 45.000004 18 GGCGACT 20 6.962015E-4 45.000004 10 CTAGGGA 20 6.962015E-4 45.000004 5 GCTCGCA 20 6.962015E-4 45.000004 20 GTAAGGG 20 6.962015E-4 45.000004 3 CGAGCTC 20 6.962015E-4 45.000004 17 GAATTCG 20 6.962015E-4 45.000004 12 CGCATTT 20 6.962015E-4 45.000004 23 AGTCTCT 20 6.962015E-4 45.000004 7 GCATTTT 20 6.962015E-4 45.000004 24 ACGGCGC 20 6.962015E-4 45.000004 8 CTCGCAT 20 6.962015E-4 45.000004 21 CGACTGT 20 6.962015E-4 45.000004 12 TCGAGCT 20 6.962015E-4 45.000004 16 >>END_MODULE