##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936180.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 79886 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.57379265453271 31.0 31.0 34.0 30.0 34.0 2 31.732719124752773 31.0 31.0 34.0 30.0 34.0 3 30.530355756953657 31.0 30.0 34.0 25.0 34.0 4 34.90954610319706 37.0 35.0 37.0 32.0 37.0 5 31.44321908719926 35.0 35.0 37.0 0.0 37.0 6 33.59722604711714 36.0 35.0 37.0 17.0 37.0 7 21.574030493453172 32.0 0.0 37.0 0.0 37.0 8 28.549207620859725 35.0 17.0 37.0 17.0 37.0 9 35.055566682522596 37.0 32.0 39.0 32.0 39.0 10 36.533172270485444 37.0 35.0 39.0 33.0 39.0 11 36.86878802293268 39.0 37.0 39.0 33.0 39.0 12 37.31802819017099 39.0 37.0 39.0 34.0 39.0 13 37.245011641589265 39.0 37.0 39.0 34.0 39.0 14 38.763525523871515 40.0 38.0 41.0 35.0 41.0 15 38.866422151565985 40.0 38.0 41.0 35.0 41.0 16 38.845579951430786 40.0 38.0 41.0 35.0 41.0 17 38.799889843026314 40.0 38.0 41.0 35.0 41.0 18 38.5290038304584 40.0 38.0 41.0 35.0 41.0 19 38.25652805247478 40.0 37.0 41.0 34.0 41.0 20 37.99594422051423 40.0 36.0 41.0 34.0 41.0 21 37.87905265002629 39.0 35.0 41.0 33.0 41.0 22 37.696116966677515 39.0 35.0 41.0 33.0 41.0 23 37.529254187216786 39.0 35.0 41.0 33.0 41.0 24 37.29318028190171 39.0 35.0 41.0 33.0 41.0 25 37.13032321057507 39.0 35.0 41.0 33.0 41.0 26 37.01632326064642 39.0 35.0 40.0 33.0 41.0 27 36.956851012693086 39.0 35.0 40.0 33.0 41.0 28 36.91535437999149 39.0 35.0 40.0 33.0 41.0 29 36.9136519540345 39.0 35.0 40.0 33.0 41.0 30 36.754037002728886 38.0 35.0 40.0 33.0 41.0 31 36.5567558771249 38.0 35.0 40.0 32.0 41.0 32 36.24606313997447 38.0 35.0 40.0 31.0 41.0 33 35.67300903787898 38.0 34.0 40.0 26.0 41.0 34 34.874032997020755 38.0 33.0 40.0 21.0 41.0 35 34.08165385674586 38.0 33.0 40.0 16.0 41.0 36 33.47468893172771 38.0 33.0 40.0 14.0 41.0 37 33.08657336704805 38.0 33.0 40.0 10.0 41.0 38 32.82220914803595 38.0 32.0 40.0 10.0 41.0 39 32.65593470695742 38.0 31.0 40.0 9.0 41.0 40 32.524334676914606 38.0 31.0 40.0 8.0 41.0 41 32.33337505945973 38.0 30.0 40.0 8.0 41.0 42 32.13127456625691 38.0 30.0 40.0 8.0 41.0 43 31.982149563127457 38.0 30.0 40.0 8.0 41.0 44 31.78992564404276 38.0 29.0 40.0 8.0 41.0 45 31.737363242620734 38.0 29.0 40.0 8.0 41.0 46 31.559171819843275 37.0 27.0 40.0 7.0 41.0 47 31.47123400846206 37.0 27.0 40.0 7.0 41.0 48 31.306962421450567 37.0 26.0 40.0 7.0 41.0 49 31.14484390256115 37.0 26.0 40.0 7.0 41.0 50 31.002941691910973 37.0 25.0 40.0 7.0 41.0 51 29.50128933730566 35.0 22.0 39.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 2.0 12 0.0 13 2.0 14 1.0 15 3.0 16 6.0 17 13.0 18 29.0 19 69.0 20 139.0 21 237.0 22 486.0 23 866.0 24 1561.0 25 2534.0 26 3265.0 27 3183.0 28 2695.0 29 2385.0 30 2104.0 31 2134.0 32 2531.0 33 3264.0 34 4322.0 35 5632.0 36 7159.0 37 12490.0 38 13370.0 39 9398.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.384723230603612 17.123150489447465 21.057506947400046 30.434619332548884 2 45.53113186290464 21.573241869664272 20.301429537090353 12.594196730340734 3 25.84307638384698 21.231504894474625 40.882006859775174 12.043411861903213 4 20.937335703377315 21.46684024735248 43.599629471997595 13.996194577272615 5 18.453796660240844 32.254712965976516 36.61717948076008 12.67431089302256 6 19.835765966502265 28.89492526850762 40.764339183336254 10.504969581653857 7 38.54743008787522 40.12217409808978 19.23991688155622 2.0904789324787822 8 66.80519740630399 4.506421650852465 26.222366872793728 2.466014070049821 9 61.796810454898235 6.906091179931402 27.348972285506846 3.9481260796635205 10 28.043712290013268 30.218060736549585 32.861828105049696 8.87639886838745 11 18.468818065743683 22.388153118193426 45.58495856595649 13.558070250106402 12 17.14693438149363 21.13887289387377 46.85051197957088 14.863680745061714 13 16.805197406303986 21.291590516485993 48.42525598978544 13.47795608742458 14 15.539643992689584 24.185714643366797 45.5173622411937 14.75727912274992 15 15.294294369476505 24.015472047667927 47.35372906391608 13.336504518939488 16 18.30107903762862 23.98417745287034 44.30563553063115 13.409107978869889 17 18.15712390155972 23.331998097288636 44.810104398768246 13.700773602383395 18 17.69396389855544 23.41336404376236 45.16185564429312 13.73081641338908 19 16.859024109355833 24.645119294995368 44.13163758355657 14.36421901209223 20 17.727762060936836 24.600055078486843 44.46586385599479 13.206319004581529 21 17.38602508574719 24.09934156172546 45.3371053751596 13.177527977367747 22 17.586310492451744 21.74598803294695 45.46228375434995 15.205417720251358 23 15.696116966677515 24.277094860175747 45.6625691610545 14.36421901209223 24 16.14550734797086 23.379565881380966 45.170618130836445 15.304308639811731 25 15.637283128458051 25.40370027288887 44.26057131412263 14.698445284530456 26 16.266930375785492 25.22845054202238 43.76110958115314 14.743509501038982 27 16.191823348271285 25.321082542623234 44.12537866459705 14.361715444508425 28 14.912500312945948 24.66014070049821 45.93170267631375 14.495656310242094 29 15.981523671231503 23.885286533309966 44.93277921037478 15.200410585083745 30 16.056630698745714 24.65262999774679 44.977843426883304 14.312895876624191 31 17.327191247527725 23.964148912199885 43.88628796034349 14.8223718799289 32 16.22562151065268 24.739003079388127 43.822446986956415 15.212928423002777 33 15.991537941566733 25.557669679292992 43.078887414565756 15.371904964574517 34 16.931627569286235 24.99687054052024 43.33550309190596 14.735998798287559 35 16.15426983451418 26.93713541797061 40.9608692386651 15.94772550885011 36 17.7878476829482 28.05247477655659 39.258443281676385 14.901234258818816 37 17.54500162731893 28.551936509526076 38.39846781663871 15.504594046516285 38 17.93555817039281 28.91870916055379 36.62719375109531 16.51853891795809 39 18.655333850737303 28.08376937135418 36.781163157499435 16.479733620409082 40 18.93322985253987 27.92604461357434 37.03527526725584 16.105450266629948 41 18.702901634829633 27.941066019077187 36.1552712615477 17.200761084545476 42 18.60025536389355 27.953583856996218 36.72608467065569 16.72007610845455 43 19.495280775104522 27.750794882707858 35.77598077260096 16.977943569586664 44 18.388703903061863 28.059985479308015 35.47680444633603 18.074506171294093 45 18.393711038229476 27.651903963147483 35.3240868237238 18.63029817489923 46 18.511378714668403 28.630798888415992 34.802092982500064 18.05572941441554 47 17.608842600706005 28.429261697919532 36.43692261472599 17.524973086648473 48 18.455048444032744 28.39921888691385 35.01489622712365 18.13083644192975 49 18.56395363392835 27.539243421876176 36.285456775905665 17.611346168289813 50 17.92053676488997 27.106126229877574 35.75344866434669 19.219888340885763 51 17.50118919460231 26.870790876999724 35.4655383922089 20.16248153618907 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 86.0 1 126.0 2 166.0 3 2994.0 4 5822.0 5 4125.0 6 2428.0 7 2092.0 8 1756.0 9 1648.0 10 1540.0 11 1496.5 12 1453.0 13 1379.5 14 1306.0 15 1240.0 16 1174.0 17 1117.5 18 1061.0 19 975.0 20 889.0 21 887.5 22 886.0 23 943.5 24 1001.0 25 1080.5 26 1326.0 27 1492.0 28 1672.0 29 1852.0 30 2092.0 31 2332.0 32 2608.0 33 2884.0 34 3164.5 35 3445.0 36 3632.0 37 3819.0 38 3927.0 39 4035.0 40 4141.5 41 4248.0 42 4471.5 43 4695.0 44 4876.0 45 5057.0 46 5318.0 47 5579.0 48 5197.5 49 4816.0 50 4512.5 51 4209.0 52 3647.5 53 3086.0 54 2716.5 55 2347.0 56 2030.0 57 1713.0 58 1503.0 59 1293.0 60 1110.0 61 927.0 62 756.5 63 586.0 64 474.5 65 363.0 66 270.5 67 178.0 68 141.5 69 105.0 70 72.5 71 40.0 72 29.0 73 18.0 74 15.0 75 11.5 76 11.0 77 10.5 78 10.0 79 6.5 80 3.0 81 2.0 82 1.0 83 1.5 84 2.0 85 1.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 79886.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 72.35059960443631 #Duplication Level Percentage of deduplicated Percentage of total 1 83.2848887504758 60.25711639085697 2 10.187203709470916 14.741005933455172 3 3.4949306204366932 7.585809778934982 4 1.5260043600124573 4.416293217835415 5 0.6401605591888992 2.3158000150214053 6 0.3443025710232188 1.4946298475327342 7 0.16955604000138413 0.8587236812457752 8 0.09342883836810963 0.5407705981022958 9 0.057095401224955884 0.37177978619532837 >10 0.18339734938925223 2.1881180682472525 >50 0.01038098204090107 0.5833312470270134 >100 0.005190491020450535 0.9075432491300103 >500 0.0 0.0 >1k 0.003460327346967023 3.7390781864156426 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1939 2.427208772500814 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1048 1.3118694139148286 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 397 0.49695816538567456 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 226 0.28290313697018254 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGC 102 0.12768194677415318 No Hit CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 97 0.12142302781463585 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGCAGAGTCGTATGCCGTCTTC 88 0.1101569736875047 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05758205442755927 0.0 2 0.0 0.0 0.0 0.25160854217259593 0.0 3 0.0 0.0 0.0 0.3442405427734522 0.0 4 0.0 0.0 0.0 0.4881956788423503 0.0 5 0.0 0.0 0.0 0.9062914653381068 0.0 6 0.0 0.0 0.0 1.1816838995568686 0.0 7 0.0 0.0 0.0 1.483363793405603 0.0 8 0.0 0.0 0.0 2.049170067345968 0.0 9 0.0 0.0 0.0 2.344591042235185 0.0 10 0.0 0.0 0.0 3.043086398117317 0.0 11 0.0 0.0 0.0 3.5963748341386474 0.0 12 0.0 0.0 0.0 4.2973737576045865 0.0 13 0.0 0.0 0.0 4.49765916430914 0.0 14 0.0 0.0 0.0 4.61657862453997 0.0 15 0.0 0.0 0.0 4.7880730040307435 0.0 16 0.0 0.0 0.0 4.977092356608167 0.0 17 0.0 0.0 0.0 5.331347169716847 0.0 18 0.0 0.0 0.0 5.670580577322685 0.0 19 0.0 0.0 0.0 5.9059159302005355 0.0 20 0.0 0.0 0.0 6.1237263099917385 0.0 21 0.0 0.0 0.0 6.384097338707658 0.0 22 0.0 0.0 0.0 6.625691610545027 0.0 23 0.0 0.0 0.0 6.898580477179982 0.0 24 0.0 0.0 0.0 7.112635505595474 0.0 25 0.0 0.0 0.0 7.341711939513807 0.0 26 0.0 0.0 0.0 7.548256265177878 0.0 27 0.0 0.0 0.0 7.751045239466239 0.0 28 0.0 0.0 0.0 7.987632376135994 0.0 29 0.0 0.0 0.0 8.259269458979045 0.0 30 0.0 0.0 0.0 8.51087800115164 0.0 31 0.0 0.0 0.0 8.756227624364719 0.0 32 0.0 0.0 0.0 8.99531832861828 0.0 33 0.0 0.0 0.0 9.249430438374684 0.0 34 0.0 0.0 0.0 9.50479433192299 0.0 35 0.0 0.0 0.0 9.742633252384648 0.0 36 0.0 0.0 0.0 9.990486443181533 0.0 37 0.0 0.0 0.0 10.222066444683675 0.0 38 0.0 0.0 0.0 10.499962446486244 0.0 39 0.0 0.0 0.0 10.82792979996495 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCAAGGC 30 2.1401356E-6 45.000004 4 CAAGGAT 30 2.1401356E-6 45.000004 5 ATCTATC 25 3.8581777E-5 45.0 3 AGGAGGC 35 1.1930388E-7 45.0 7 CTATCTC 45 3.7471182E-10 45.0 5 GTAGGGC 20 6.993879E-4 45.0 5 ACGGGAA 20 6.993879E-4 45.0 5 CGTTATT 235 0.0 45.0 1 CAGGGTC 20 6.993879E-4 45.0 6 ATAAGGA 25 3.8581777E-5 45.0 4 GCTAGGA 20 6.993879E-4 45.0 4 TAGGCGA 20 6.993879E-4 45.0 6 GGCGATA 20 6.993879E-4 45.0 8 CGAAGGA 25 3.8581777E-5 45.0 4 CGTTTTA 425 0.0 44.470585 1 CGTTTTT 975 0.0 43.615387 1 CGGTTTT 110 0.0 40.909092 1 CGGTTTA 55 5.820766E-11 40.909092 1 GTTTTAT 465 0.0 40.64516 2 AGGCGAT 45 1.88993E-8 40.0 7 >>END_MODULE