##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936179.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 81070 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.291316146540026 31.0 31.0 34.0 28.0 34.0 2 31.468015295423708 31.0 31.0 34.0 30.0 34.0 3 30.74093992845689 31.0 30.0 34.0 26.0 34.0 4 34.92703836190946 35.0 35.0 37.0 32.0 37.0 5 31.56903910201061 35.0 35.0 37.0 0.0 37.0 6 33.534538053533986 35.0 35.0 37.0 17.0 37.0 7 21.252991242136424 32.0 0.0 37.0 0.0 37.0 8 28.273590724065624 35.0 17.0 37.0 17.0 37.0 9 34.52428765264586 35.0 32.0 39.0 28.0 39.0 10 35.87303564820525 37.0 35.0 39.0 32.0 39.0 11 36.36142839521401 37.0 35.0 39.0 32.0 39.0 12 36.844023683236706 39.0 35.0 39.0 33.0 39.0 13 36.70045639570741 39.0 35.0 39.0 33.0 39.0 14 38.03807820402122 40.0 37.0 41.0 33.0 41.0 15 38.1531022573085 40.0 37.0 41.0 33.0 41.0 16 38.17381275440977 40.0 37.0 41.0 33.0 41.0 17 38.12875292956704 40.0 37.0 41.0 33.0 41.0 18 37.92727272727273 39.0 37.0 40.0 33.0 41.0 19 37.760848649315406 39.0 37.0 40.0 33.0 41.0 20 37.58586406808931 39.0 36.0 40.0 33.0 41.0 21 37.446897742691505 39.0 35.0 40.0 33.0 41.0 22 37.405735783890464 39.0 35.0 40.0 33.0 41.0 23 37.26728752929567 39.0 35.0 40.0 33.0 41.0 24 37.065363266313064 39.0 35.0 40.0 32.0 41.0 25 36.898088072036515 38.0 35.0 40.0 32.0 41.0 26 36.75717281361786 38.0 35.0 40.0 32.0 41.0 27 36.707252991242136 38.0 35.0 40.0 32.0 41.0 28 36.650770938694954 38.0 35.0 40.0 32.0 41.0 29 36.640606882940666 38.0 35.0 40.0 31.0 41.0 30 36.41779943258912 38.0 35.0 40.0 31.0 41.0 31 36.22568150980634 38.0 35.0 40.0 30.0 41.0 32 36.00909090909091 38.0 35.0 40.0 30.0 41.0 33 35.64646601702233 38.0 34.0 40.0 27.0 41.0 34 35.185691377821634 38.0 34.0 40.0 25.0 41.0 35 34.73173800419391 38.0 33.0 40.0 23.0 41.0 36 34.312248673985444 38.0 33.0 40.0 21.0 41.0 37 34.157974589860615 38.0 33.0 40.0 18.0 41.0 38 33.911459232761814 38.0 33.0 40.0 18.0 41.0 39 33.7616134205008 38.0 33.0 40.0 16.0 41.0 40 33.564758850376215 38.0 33.0 40.0 15.0 41.0 41 33.38882447267793 38.0 33.0 40.0 15.0 41.0 42 33.32332552115456 38.0 33.0 40.0 15.0 41.0 43 33.176551128654246 37.0 32.0 40.0 14.0 41.0 44 32.9391513506846 37.0 32.0 40.0 12.0 41.0 45 32.7483656099667 37.0 31.0 40.0 12.0 41.0 46 32.50254101393857 37.0 31.0 40.0 10.0 41.0 47 32.46522758110275 37.0 31.0 40.0 10.0 41.0 48 32.293265079560875 37.0 31.0 40.0 10.0 41.0 49 32.08567904280252 36.0 30.0 40.0 10.0 41.0 50 31.794942642161097 36.0 29.0 40.0 10.0 41.0 51 29.717700752436166 34.0 24.0 38.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 2.0 12 3.0 13 2.0 14 0.0 15 4.0 16 7.0 17 12.0 18 35.0 19 68.0 20 139.0 21 240.0 22 462.0 23 720.0 24 1164.0 25 1770.0 26 2156.0 27 2363.0 28 2267.0 29 2375.0 30 2456.0 31 2836.0 32 3578.0 33 4698.0 34 5976.0 35 7739.0 36 9130.0 37 12761.0 38 11362.0 39 6741.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.9981497471321 18.467990625385468 23.353891698532134 23.17996792895029 2 39.11557912914765 23.347724188972492 21.79844578759097 15.738250894288885 3 26.300727766128034 23.559886517824104 36.01948933020846 14.119896385839398 4 22.96903910201061 23.381028740594548 37.05563093622795 16.594301221166894 5 18.319970395954112 33.68940421857654 31.921795978783766 16.06882940668558 6 20.85358332305415 30.772172196866904 35.790057974589864 12.584186505489084 7 40.270136918712225 41.56408042432466 14.853830023436537 3.3119526335265816 8 66.69051437029727 6.607869742198099 21.443197236955715 5.258418650548909 9 61.11261872455902 9.024299987664982 23.57222153694338 6.290859750832614 10 27.912914765017888 29.964228444554088 30.717898112742077 11.40495867768595 11 20.31947699518934 24.813124460342912 38.199087208585176 16.66831133588257 12 19.232761810780808 22.574318490193658 41.06697915381769 17.125940545207847 13 18.00049340076477 24.72554582459603 42.37572468237325 14.898236092265943 14 16.065128900949794 26.602935734550385 39.802639694091525 17.529295670408292 15 14.345627235722217 26.25138768965092 43.25521154557789 16.14777352904897 16 16.515357098803506 26.515357098803506 39.617614407302334 17.351671395090662 17 16.910077710620453 25.522388059701495 38.50129517700752 19.066239052670532 18 17.185148636980387 24.784753916368572 41.16935981250771 16.860737634143334 19 16.362402861724433 26.25015418773899 38.94658936721352 18.440853583323054 20 18.13001110151721 26.243986678179347 39.54853830023436 16.077463920069075 21 16.435179474528187 27.55396570864685 39.89638583939805 16.114468977426917 22 16.330331812014308 25.162205501418526 37.85123966942149 20.656223017145678 23 14.78352041445664 26.83976810164056 38.97989391883557 19.396817565067227 24 16.62513876896509 24.316023189835946 39.52140125817195 19.53743678302701 25 15.265819662020478 27.866041692364625 37.3356358702356 19.5325027753793 26 16.16627605772789 26.380905390403353 38.17565067225854 19.277167879610214 27 16.805230048106576 26.393240409522633 37.1592450968299 19.64228444554089 28 13.40446527692118 25.933144196373505 39.00209695325027 21.66029357345504 29 17.239422721105218 23.833723942272112 37.46268656716418 21.464166769458494 30 16.38460589613914 24.987048229924756 37.79819908720859 20.830146786727518 31 16.379671888491426 26.47465153570988 35.818428518564204 21.32724805723449 32 16.865671641791042 25.2140125817195 36.86443813987912 21.055877636610337 33 15.140002467003825 24.383865794991983 38.227457752559516 22.24867398544468 34 15.149870482299246 24.843962008141112 38.538300234365366 21.467867275194276 35 15.574195140002466 24.423337856173678 37.986924879733564 22.01554212409029 36 16.515357098803506 26.36486986554829 37.0223263846059 20.097446651042308 37 14.980880720365116 26.36857037128408 36.50918958924386 22.141359319106947 38 14.292586653509312 27.19131614654003 36.28222523744912 22.233871962501542 39 16.611570247933884 25.34229678056001 37.08030097446651 20.965831997039597 40 18.38164549155051 25.369433822622423 37.08153447637844 19.167386209448626 41 16.461083014678675 26.034291353151595 35.283088688787466 22.22153694338226 42 17.979523868261996 24.20254101393857 36.482052547181446 21.335882570617983 43 18.46182311582583 24.145799925989884 34.859997532996175 22.53237942518811 44 17.269026766991487 24.448007894412235 33.694338226224254 24.588627112372023 45 18.123843591957566 24.280251634390034 33.08498828173184 24.51091649192056 46 18.604909337609474 25.126433945972614 34.33945972616257 21.929196990255335 47 15.43357592204268 24.829159985197975 37.41457999259899 22.322684100160355 48 16.216849636116937 23.855926976686813 36.03552485506353 23.891698532132725 49 17.99555939311706 22.3732576785494 37.23942272110522 22.39176020722832 50 16.494387566300727 23.171333415566796 36.331565313926234 24.00271370420624 51 15.539657086468484 22.61625755519921 34.77241889724929 27.071666461083016 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 227.0 1 277.0 2 327.0 3 2364.5 4 4402.0 5 2947.5 6 1493.0 7 1312.0 8 1131.0 9 1061.5 10 992.0 11 969.5 12 947.0 13 913.5 14 880.0 15 856.0 16 832.0 17 770.0 18 708.0 19 725.5 20 743.0 21 769.0 22 795.0 23 780.0 24 765.0 25 855.0 26 1025.0 27 1105.0 28 1283.5 29 1462.0 30 1622.0 31 1782.0 32 2032.5 33 2283.0 34 2431.0 35 2579.0 36 2757.0 37 2935.0 38 3141.5 39 3348.0 40 3671.0 41 3994.0 42 4468.5 43 4943.0 44 5540.0 45 6137.0 46 7055.0 47 7973.0 48 8020.5 49 8068.0 50 7350.5 51 6633.0 52 5465.0 53 4297.0 54 3552.5 55 2808.0 56 2357.5 57 1907.0 58 1619.5 59 1332.0 60 1120.5 61 909.0 62 764.0 63 619.0 64 484.5 65 350.0 66 274.5 67 199.0 68 159.0 69 119.0 70 77.5 71 36.0 72 30.0 73 24.0 74 21.5 75 13.0 76 7.0 77 8.0 78 9.0 79 6.5 80 4.0 81 2.5 82 1.0 83 1.0 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 81070.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.7758727026027 #Duplication Level Percentage of deduplicated Percentage of total 1 83.74986928788037 59.27470087578636 2 9.174247969605075 12.9863081287776 3 3.3741155146571855 7.164179104477612 4 1.6434870507860153 4.652769211792278 5 0.8139007982153439 2.880226964351795 6 0.4269929241172575 1.8132478105341063 7 0.2561957544703545 1.2692734673738744 8 0.16382585660009064 0.9275934377698285 9 0.07494161525323295 0.47736523991612184 >10 0.29105231970441636 3.162698902183298 >50 0.01917111087873401 1.0509436289626248 >100 0.00871414130851546 1.1755273220673492 >500 0.0017428282617030916 1.1286542494140865 >1k 0.0017428282617030916 2.0365116565930674 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1651 2.0365116565930674 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 915 1.1286542494140865 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 375 0.4625632169729863 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 175 0.21586283458739358 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 165 0.20352781546811397 No Hit CCTGTCTCTTATACACATCTGACGCGCCCTATTTCGTATGCCGTCTTCTGC 137 0.16898976193413098 RNA PCR Primer, Index 27 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCGCCCTATTTCGTATGCCGTCTTCTGC 101 0.12458369310472432 Illumina PCR Primer Index 6 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCGCCCTATTTCGTATGCCGTCTTC 98 0.12088318736894044 RNA PCR Primer, Index 27 (95% over 21bp) GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 94 0.11594917972122856 No Hit CTGTCTCTTATACACATCTGACGCGCCCTATTTCGTATGCCGTCTTCTGCT 92 0.11348217589737264 RNA PCR Primer, Index 27 (96% over 25bp) GCTGTCACTTATACACATCTGACGCGCCCTATTTCGTATGCCGTCTTCTGC 85 0.1048476625138769 Illumina PCR Primer Index 6 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCGCCCTATTTCGTATGCCG 83 0.10238065869002098 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.19119279634883435 0.0 2 0.0 0.0 0.0 0.8609843345257185 0.0 3 0.0 0.0 0.0 1.1286542494140865 0.0 4 0.0 0.0 0.0 1.4431972369557173 0.0 5 0.0 0.0 0.0 2.4818058467990625 0.0 6 0.0 0.0 0.0 3.150363883064019 0.0 7 0.0 0.0 0.0 3.917602072283212 0.0 8 0.0 0.0 0.0 5.603799185888738 0.0 9 0.0 0.0 0.0 6.205748118909584 0.0 10 0.0 0.0 0.0 7.809300604415937 0.0 11 0.0 0.0 0.0 9.69039102010608 0.0 12 0.0 0.0 0.0 11.359319106944616 0.0 13 0.0 0.0 0.0 12.035278154681139 0.0 14 0.0 0.0 0.0 12.306648575305292 0.0 15 0.0 0.0 0.0 12.832120389786605 0.0 16 0.0 0.0 0.0 13.913901566547429 0.0 17 0.0 0.0 0.0 15.15480448994696 0.0 18 0.0 0.0 0.0 16.33526581966202 0.0 19 0.0 0.0 0.0 17.066732453435304 0.0 20 0.0 0.0 0.0 17.7944985814728 0.0 21 0.0 0.0 0.0 18.7208585173307 0.0 22 0.0 0.0 0.0 19.63611693598125 0.0 23 0.0 0.0 0.0 20.54520784507216 0.0 24 0.0 0.0 0.0 21.287775996052794 0.0 25 0.0 0.0 0.0 21.947699518934254 0.0 26 0.0 0.0 0.0 22.552115455778956 0.0 27 0.0 0.0 0.0 23.205871469100778 0.0 28 0.0 0.0 0.0 23.8509929690391 0.0 29 0.0 0.0 0.0 24.467743925003084 0.0 30 0.0 0.0 0.0 25.21031207598372 0.0 31 0.0 0.0 0.0 25.897372640927593 0.0 32 0.0 0.0 0.0 26.527692117922783 0.0 33 0.0 0.0 0.0 27.143209571974836 0.0 34 0.0 0.0 0.0 27.70445294190206 0.0 35 0.0 0.0 0.0 28.416183545084493 0.0 36 0.0 0.0 0.0 29.062538546934746 0.0 37 0.0 0.0 0.0 29.674355495251017 0.0 38 0.0 0.0 0.0 30.239299370914026 0.0 39 0.0 0.0 0.0 30.88442087085235 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTTT 45 3.7471182E-10 45.000004 1 AGGGGCA 20 6.994505E-4 45.0 5 CGTTAGG 20 6.994505E-4 45.0 3 ATGATGG 20 6.994505E-4 45.0 2 TATAAGG 25 3.8586964E-5 45.0 3 TGTCACT 70 0.0 45.0 3 GGGGGTC 20 6.994505E-4 45.0 6 AGACGGG 20 6.994505E-4 45.0 3 AAAGGTA 20 6.994505E-4 45.0 5 ACGGGCG 20 6.994505E-4 45.0 5 TTAGGCT 20 6.994505E-4 45.0 5 AGCATAG 20 6.994505E-4 45.0 2 AAGGATA 20 6.994505E-4 45.0 6 TCACTTA 70 0.0 45.0 5 CGTTGTT 20 6.994505E-4 45.0 1 CGGTTTA 25 3.8586964E-5 45.0 1 CGTTTTA 335 0.0 45.0 1 AGGTATG 30 2.1405376E-6 44.999996 7 CGTTTTT 620 0.0 43.54839 1 CGTTATT 110 0.0 42.954544 1 >>END_MODULE