##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936177.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 672065 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.735808292352676 31.0 31.0 34.0 30.0 34.0 2 31.90134138810978 31.0 31.0 34.0 30.0 34.0 3 31.49534048045948 31.0 31.0 34.0 28.0 34.0 4 35.44981065819526 37.0 35.0 37.0 33.0 37.0 5 31.795870935103004 37.0 35.0 37.0 0.0 37.0 6 33.749653679331615 37.0 35.0 37.0 17.0 37.0 7 21.046153273864878 32.0 0.0 37.0 0.0 37.0 8 28.2213684688237 35.0 17.0 37.0 17.0 37.0 9 34.72263694731908 37.0 32.0 39.0 30.0 39.0 10 36.14219457939336 37.0 35.0 39.0 32.0 39.0 11 36.570284124303456 38.0 35.0 39.0 32.0 39.0 12 36.99718479611347 39.0 37.0 39.0 33.0 39.0 13 36.843195226652185 39.0 37.0 39.0 33.0 39.0 14 38.236542596326245 40.0 37.0 41.0 34.0 41.0 15 38.36635742078519 40.0 38.0 41.0 34.0 41.0 16 38.40242089678826 40.0 38.0 41.0 34.0 41.0 17 38.339889742807614 40.0 38.0 41.0 34.0 41.0 18 38.17863599503024 40.0 37.0 41.0 33.0 41.0 19 38.12222478480504 40.0 37.0 41.0 34.0 41.0 20 38.024045293238004 40.0 37.0 41.0 34.0 41.0 21 37.92133945377307 40.0 36.0 41.0 33.0 41.0 22 37.86624656841228 39.0 36.0 41.0 33.0 41.0 23 37.80724185904637 39.0 36.0 41.0 33.0 41.0 24 37.682899719521174 39.0 35.0 41.0 33.0 41.0 25 37.52308184476204 39.0 35.0 41.0 33.0 41.0 26 37.406869871217815 39.0 35.0 41.0 33.0 41.0 27 37.35075773920677 39.0 35.0 41.0 33.0 41.0 28 37.15669764085319 39.0 35.0 41.0 32.0 41.0 29 37.10549277227649 39.0 35.0 41.0 32.0 41.0 30 36.9495167878107 39.0 35.0 41.0 31.0 41.0 31 36.79701219376102 39.0 35.0 41.0 31.0 41.0 32 36.6980292084843 39.0 35.0 41.0 31.0 41.0 33 36.43137494141192 39.0 35.0 41.0 30.0 41.0 34 36.1616644223401 39.0 35.0 41.0 29.0 41.0 35 35.92084247803412 39.0 35.0 41.0 27.0 41.0 36 35.67309114445775 39.0 35.0 40.0 26.0 41.0 37 35.57289696681124 39.0 35.0 40.0 25.0 41.0 38 35.41660702461815 39.0 35.0 40.0 24.0 41.0 39 35.33346179313013 39.0 35.0 40.0 24.0 41.0 40 35.28701688080766 39.0 35.0 40.0 24.0 41.0 41 35.148734125419416 39.0 35.0 40.0 23.0 41.0 42 35.048996748826376 38.0 34.0 40.0 23.0 41.0 43 34.91018874662421 38.0 34.0 40.0 23.0 41.0 44 34.80931308727578 38.0 34.0 40.0 22.0 41.0 45 34.732494624775875 38.0 34.0 40.0 22.0 41.0 46 34.546771517635946 38.0 34.0 40.0 22.0 41.0 47 34.51058900552774 38.0 34.0 40.0 22.0 41.0 48 34.39347235758446 38.0 33.0 40.0 20.0 41.0 49 34.19904175935363 38.0 33.0 40.0 20.0 41.0 50 34.006764226674505 38.0 33.0 40.0 19.0 41.0 51 32.0714335666937 36.0 30.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 12.0 9 23.0 10 23.0 11 14.0 12 12.0 13 6.0 14 11.0 15 21.0 16 60.0 17 115.0 18 253.0 19 586.0 20 1135.0 21 1904.0 22 3059.0 23 4559.0 24 6959.0 25 9624.0 26 12190.0 27 12799.0 28 12967.0 29 13511.0 30 15209.0 31 18491.0 32 24135.0 33 33400.0 34 44989.0 35 57794.0 36 73669.0 37 118491.0 38 124409.0 39 81623.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.80145521638532 18.59224926160416 24.840752010594215 17.765543511416308 2 34.0245363171717 24.2729497890829 25.069003742197555 16.633510151547842 3 28.365708674012186 23.734162618199132 32.06698756816677 15.833141139621912 4 25.688140284049904 24.05243540431357 32.634938584809504 17.624485726827018 5 21.59210790622931 34.89632699218082 27.370120449658884 16.14144465193099 6 24.031752881045733 32.71632952169805 30.05497980106091 13.196937796195307 7 45.94049682694382 41.81009277376444 9.392990261358648 2.856420137933087 8 78.06164582294868 5.070491693511788 13.257497414684591 3.610365068854947 9 72.01267734519726 7.822755239448566 15.052264289912435 5.112303125441735 10 34.11039110800294 33.54407683780587 20.65826966141668 11.687262392774509 11 23.846056557029456 25.36823075148981 34.08182244276967 16.703890248711062 12 23.815553555087675 21.705638591505284 36.19798680187184 18.28082105153519 13 21.766793390520263 23.678959624441088 36.71713301540774 17.837113969630913 14 18.08679220015921 27.166717505003234 34.42509281096323 20.32139748387433 15 17.47673216132368 25.74319448267653 38.81469798308199 17.965375372917798 16 20.577771495316675 26.301622610908172 35.07934500383148 18.04126088994368 17 20.97817919397677 24.13397513633354 33.661029811104584 21.22681585858511 18 21.580650681109713 24.63050448989309 34.310074174373014 19.47877065462418 19 22.01795957236279 26.031261857112035 32.32678386763185 19.62399470289332 20 22.67027742852254 25.96698236033717 32.85515537931599 18.507584831824303 21 22.302158273381295 26.53404060619137 33.30466547134578 17.859135649081562 22 20.966870763988602 24.44689129771674 33.50330697179588 21.082930966498775 23 19.629053737361712 25.848243845461376 34.19788264527985 20.32481977189706 24 19.964735553852677 24.312082908647227 34.96745106500116 20.75573047249894 25 19.674287457314396 26.414558115658455 32.80843370804907 21.102720718978073 26 19.619679644082048 26.325727422198746 32.506082000996926 21.54851093272228 27 20.012498791039558 26.07292449391056 32.97716738708309 20.937409327966787 28 18.593588417786968 25.946746222463602 34.76270896416269 20.696956395586735 29 19.51939172550274 24.66785206788034 34.52954699322238 21.28320921339454 30 20.81390936888545 24.99877244016576 33.41760097609606 20.76971721485273 31 20.5383407854895 26.170980485518513 32.647734966111905 20.64294376288008 32 21.185302016918005 26.025607642117947 33.11182698102118 19.677263359942863 33 20.448022140715555 25.26481813515062 32.644015087826325 21.6431446363075 34 19.34842611949737 25.05754651707796 33.92811707200941 21.665910291415265 35 19.134458720510665 25.456317469292404 33.29469619754042 22.114527612656516 36 20.063386725986327 27.223110859812667 32.29092424095884 20.42257817324217 37 19.378482736044877 27.885397989777776 32.927618608319136 19.808500665858215 38 19.47281884936725 27.474872222180892 31.621643739816836 21.43066518863503 39 20.552625118106135 26.288231049080075 31.629232291519422 21.529911541294368 40 21.66918378430658 24.807570696286817 32.12219056192481 21.40105495748179 41 18.887756392610832 26.707982114825203 31.446363075000182 22.957898417563776 42 20.801856963240162 26.409945466584333 31.19594086881477 21.592256701360732 43 20.67686905284459 26.08765521192147 31.276736625177627 21.958739110056317 44 19.74883381815747 26.043760648151594 31.412140194772824 22.79526533891811 45 20.00669578091405 25.586215619024944 30.75178740151622 23.655301198544784 46 20.632676898811873 26.664533936449597 29.966446697864047 22.736342466874486 47 19.297686979682023 25.932908275241235 31.9854478361468 22.78395690892994 48 19.3479797341031 25.181344066422145 32.71677590709232 22.753900292382433 49 19.892718710243802 25.15887600157723 32.41769769293148 22.530707595247485 50 18.96572504147664 24.80638033523543 32.838787914859424 23.3891067084285 51 19.118835231711216 24.533192473942254 31.591884713532174 24.756087580814356 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 323.0 1 730.0 2 1137.0 3 10187.5 4 19238.0 5 13054.5 6 6871.0 7 5883.5 8 4896.0 9 4658.5 10 4421.0 11 4286.5 12 4152.0 13 3961.5 14 3771.0 15 3645.0 16 3519.0 17 3463.0 18 3407.0 19 3514.0 20 3621.0 21 3957.0 22 4293.0 23 4725.5 24 5158.0 25 5971.5 26 7955.5 27 9126.0 28 10556.0 29 11986.0 30 13627.0 31 15268.0 32 17666.5 33 20065.0 34 22579.5 35 25094.0 36 26513.5 37 27933.0 38 29890.0 39 31847.0 40 34186.5 41 36526.0 42 38967.5 43 41409.0 44 45472.0 45 49535.0 46 54613.5 47 59692.0 48 56473.0 49 53254.0 50 50425.5 51 47597.0 52 42024.0 53 36451.0 54 32959.5 55 29468.0 56 27690.5 57 25913.0 58 24034.5 59 22156.0 60 20433.0 61 18710.0 62 16605.0 63 14500.0 64 12040.5 65 9581.0 66 7716.0 67 5851.0 68 4606.5 69 3362.0 70 2727.0 71 2092.0 72 1695.0 73 1298.0 74 1036.0 75 626.5 76 479.0 77 343.5 78 208.0 79 177.0 80 146.0 81 105.5 82 65.0 83 55.0 84 45.0 85 32.5 86 20.0 87 16.5 88 13.0 89 8.0 90 3.0 91 2.0 92 1.0 93 2.0 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 672065.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.261989677682735 #Duplication Level Percentage of deduplicated Percentage of total 1 78.81105869368149 38.03578501161704 2 7.834586354536692 7.5622545154312775 3 3.082563393165461 4.4631192798526245 4 1.8371775141942066 3.546633689044465 5 1.3927249692680157 3.360783904533199 6 1.101138708750419 3.1885886997245767 7 0.8911054205579801 3.010456442608746 8 0.7474323154571527 2.885805655468769 9 0.637126072751845 2.7674074751878877 >10 3.6240449737100713 26.43705868567284 >50 0.02388485666751779 0.8064244170150359 >100 0.014801882341273153 1.542061373790917 >500 0.0013456256673884572 0.48447158763866893 >1k 6.728128336942286E-4 0.8030149036396973 >5k 3.364064168471143E-4 1.106134358774213 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6813 1.0137412303869417 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3683 0.5480124690320133 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTC 1263 0.18792825098762767 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCG 880 0.13093971565250384 No Hit GAATCTATCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTC 821 0.12216080289852917 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 718 0.10683490436192927 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4879513142329983E-4 0.0 0.0 0.06680901400906163 0.0 2 1.4879513142329983E-4 0.0 0.0 0.3035420681035316 0.0 3 1.4879513142329983E-4 0.0 0.0 0.4157335971966997 0.0 4 1.4879513142329983E-4 0.0 0.0 0.5859552275449548 0.0 5 1.4879513142329983E-4 0.0 0.0 1.1094164998921234 0.0 6 1.4879513142329983E-4 0.0 0.0 1.56963984138439 0.0 7 1.4879513142329983E-4 0.0 0.0 1.9410324894169462 0.0 8 1.4879513142329983E-4 0.0 0.0 2.782468957615707 0.0 9 1.4879513142329983E-4 0.0 0.0 3.1203827010780207 0.0 10 1.4879513142329983E-4 0.0 0.0 3.9804185607046936 0.0 11 1.4879513142329983E-4 0.0 0.0 4.696420733113612 0.0 12 1.4879513142329983E-4 0.0 0.0 5.445306629567081 0.0 13 1.4879513142329983E-4 0.0 0.0 5.827858912456384 0.0 14 1.4879513142329983E-4 0.0 0.0 6.006264275032921 0.0 15 1.4879513142329983E-4 0.0 0.0 6.235111187161956 0.0 16 1.4879513142329983E-4 0.0 0.0 6.620044192154032 0.0 17 1.4879513142329983E-4 0.0 0.0 7.115531979793621 0.0 18 1.4879513142329983E-4 0.0 0.0 7.707439012595508 0.0 19 1.4879513142329983E-4 0.0 0.0 8.039549745932312 0.0 20 1.4879513142329983E-4 0.0 0.0 8.372999635451928 0.0 21 1.4879513142329983E-4 0.0 0.0 8.771175407140678 0.0 22 1.4879513142329983E-4 0.0 0.0 9.195687917091353 0.0 23 1.4879513142329983E-4 0.0 0.0 9.629276930058849 0.0 24 1.4879513142329983E-4 0.0 0.0 9.964214770892696 0.0 25 1.4879513142329983E-4 0.0 0.0 10.274899005304546 0.0 26 1.4879513142329983E-4 0.0 0.0 10.569810955785528 0.0 27 1.4879513142329983E-4 0.0 0.0 10.865169291660777 0.0 28 1.4879513142329983E-4 0.0 0.0 11.184334848563754 0.0 29 1.4879513142329983E-4 0.0 0.0 11.53444979280278 0.0 30 1.4879513142329983E-4 0.0 0.0 11.931583998571567 0.0 31 1.4879513142329983E-4 0.0 0.0 12.306101344364013 0.0 32 1.4879513142329983E-4 0.0 0.0 12.656067493471614 0.0 33 1.4879513142329983E-4 0.0 0.0 13.003206535082173 0.0 34 1.4879513142329983E-4 0.0 0.0 13.376831110086078 0.0 35 1.4879513142329983E-4 0.0 0.0 13.748967733775752 0.0 36 1.4879513142329983E-4 0.0 0.0 14.114854961945644 0.0 37 1.4879513142329983E-4 0.0 0.0 14.459464486322007 0.0 38 1.4879513142329983E-4 0.0 0.0 14.817316777395044 0.0 39 2.9759026284659966E-4 0.0 0.0 15.198381108970114 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAG 30 2.1641517E-6 44.999996 2 ACGGTTA 25 3.8890714E-5 44.999996 34 CGTTTTA 1505 0.0 44.102993 1 CGTTATT 580 0.0 43.83621 1 CGTTTTT 2705 0.0 42.338264 1 TGGGCGA 230 0.0 42.065216 6 ATGGGCG 105 0.0 40.714287 5 GACCGAT 290 0.0 38.793106 9 CGAAGGA 180 0.0 38.75 4 ACCGATC 35 6.244416E-6 38.57143 10 GCCGATC 35 6.244416E-6 38.57143 9 ACATACG 135 0.0 38.333336 17 AGGCGAT 370 0.0 38.310814 7 AACGAGC 200 0.0 38.249996 15 TAGGCGA 130 0.0 38.07692 6 CCTTATC 95 0.0 37.894733 43 GCGATGT 125 0.0 37.8 9 CGGTTTA 155 0.0 37.74194 1 CGTATTG 30 1.1394175E-4 37.499996 13 CCGTAGA 30 1.1394175E-4 37.499996 1 >>END_MODULE