SRR2936176.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936176.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	170568
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1305	0.7650907555930773	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCG	857	0.5024389099948408	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTC	762	0.446742648093429	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	734	0.43032690774353927	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCG	601	0.3523521410815628	No Hit
GAATCTATCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTC	512	0.300173537826556	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGC	504	0.29548332629801605	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGC	351	0.20578303081468974	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	263	0.15419070400075044	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCT	224	0.13132592279911823	No Hit
GCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC	193	0.11315135312602598	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCG	177	0.10377093006894611	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAGTTGG	25	3.8767994E-5	45.000004	2
GGCCGGT	25	3.8767994E-5	45.000004	9
ACTTAGG	25	3.8767994E-5	45.000004	3
CATACGA	30	2.1546039E-6	45.000004	18
TAAGGCA	35	1.2038072E-7	45.000004	5
ACATACG	30	2.1546039E-6	45.000004	17
CTAGGAT	25	3.8767994E-5	45.000004	5
TAATACG	45	3.8016879E-10	45.0	4
GTACACT	20	7.0163823E-4	45.0	18
CCATCTA	20	7.0163823E-4	45.0	13
CATAGCC	20	7.0163823E-4	45.0	36
CTACGAA	20	7.0163823E-4	45.0	11
TACGAAT	20	7.0163823E-4	45.0	12
GCCTAAG	20	7.0163823E-4	45.0	2
TCATCGA	20	7.0163823E-4	45.0	16
TAGGCTC	20	7.0163823E-4	45.0	6
CGATGCG	20	7.0163823E-4	45.0	10
GCTACGA	20	7.0163823E-4	45.0	10
ATACGTC	20	7.0163823E-4	45.0	6
TGTACAC	20	7.0163823E-4	45.0	17