##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936176.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 170568 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.711534402701563 31.0 31.0 34.0 30.0 34.0 2 31.887868767881432 31.0 31.0 34.0 30.0 34.0 3 31.618509919797383 31.0 31.0 34.0 30.0 34.0 4 35.50816096805966 37.0 35.0 37.0 33.0 37.0 5 31.91277965386239 37.0 35.0 37.0 10.0 37.0 6 33.78637259040383 37.0 35.0 37.0 19.0 37.0 7 20.858484592655127 32.0 0.0 37.0 0.0 37.0 8 28.047230430092398 35.0 17.0 37.0 17.0 37.0 9 34.550449087753854 35.0 32.0 39.0 28.0 39.0 10 36.04847919891187 37.0 35.0 39.0 32.0 39.0 11 36.49427207917077 37.0 35.0 39.0 32.0 39.0 12 36.8563798602317 39.0 35.0 39.0 33.0 39.0 13 36.63161906101965 39.0 35.0 39.0 32.0 39.0 14 37.96687538107969 40.0 37.0 41.0 33.0 41.0 15 38.091851930022045 40.0 37.0 41.0 33.0 41.0 16 38.18296515172834 40.0 37.0 41.0 33.0 41.0 17 38.10307326110408 40.0 37.0 41.0 33.0 41.0 18 37.99030298766474 40.0 37.0 41.0 33.0 41.0 19 37.89009075559308 40.0 37.0 41.0 33.0 41.0 20 37.85146100089114 40.0 36.0 41.0 33.0 41.0 21 37.80467614089395 39.0 36.0 41.0 33.0 41.0 22 37.75761573096947 39.0 36.0 41.0 33.0 41.0 23 37.717883776558324 39.0 36.0 41.0 33.0 41.0 24 37.57163711833404 39.0 35.0 41.0 33.0 41.0 25 37.423057079874305 39.0 35.0 41.0 33.0 41.0 26 37.26754139111674 39.0 35.0 41.0 32.0 41.0 27 37.2573577693354 39.0 35.0 41.0 33.0 41.0 28 37.11128113127902 39.0 35.0 41.0 32.0 41.0 29 37.10779864921908 39.0 35.0 41.0 32.0 41.0 30 36.949920266404014 39.0 35.0 40.0 31.0 41.0 31 36.71980090052061 39.0 35.0 40.0 31.0 41.0 32 36.61529712490033 39.0 35.0 40.0 31.0 41.0 33 36.4121816518925 39.0 35.0 40.0 30.0 41.0 34 36.15209183434173 39.0 35.0 40.0 30.0 41.0 35 35.967625814924254 39.0 35.0 40.0 29.0 41.0 36 35.683146897425075 38.0 35.0 40.0 27.0 41.0 37 35.608883260635054 38.0 35.0 40.0 27.0 41.0 38 35.425718774916746 38.0 35.0 40.0 26.0 41.0 39 35.416742882604005 38.0 35.0 40.0 26.0 41.0 40 35.310808592467524 38.0 34.0 40.0 25.0 41.0 41 35.174616575207544 38.0 34.0 40.0 24.0 41.0 42 35.067626987477134 38.0 34.0 40.0 24.0 41.0 43 34.981362271938465 38.0 34.0 40.0 24.0 41.0 44 34.831633131654236 38.0 34.0 40.0 23.0 41.0 45 34.71901529008958 38.0 34.0 40.0 23.0 41.0 46 34.53376366024108 38.0 33.0 40.0 23.0 41.0 47 34.450770367243564 38.0 33.0 40.0 23.0 41.0 48 34.28301908916092 37.0 33.0 40.0 22.0 41.0 49 34.1883237183997 37.0 33.0 40.0 22.0 41.0 50 33.99239599455935 37.0 33.0 40.0 20.0 41.0 51 31.948706674171007 35.0 29.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 10.0 10 5.0 11 5.0 12 3.0 13 3.0 14 7.0 15 10.0 16 23.0 17 38.0 18 72.0 19 109.0 20 224.0 21 368.0 22 614.0 23 988.0 24 1525.0 25 2105.0 26 2646.0 27 2874.0 28 3222.0 29 3577.0 30 4378.0 31 5369.0 32 6947.0 33 9900.0 34 12803.0 35 16357.0 36 19622.0 37 29904.0 38 28855.0 39 17995.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.56348201303879 19.04519018807748 23.64628769757516 15.745040101308568 2 32.97453215140003 26.86142770038929 23.532550068008067 16.631490080202617 3 29.297992589465782 25.823718399699825 29.368345762393883 15.509943248440505 4 26.13092725481919 24.43482951081094 31.72634960836734 17.707893626002534 5 22.884128324187422 34.95321514000281 25.226302706252053 16.936353829557714 6 23.761784156465456 34.567445241780405 28.383987617841566 13.286782983912573 7 44.822592748932976 42.46752028516486 9.705220205431266 3.004666760470897 8 75.67128652502227 6.736316307865485 13.238122039303974 4.354275127808265 9 69.88649688100934 7.132052905586042 14.120468083110548 8.860982130294076 10 37.43785469724685 26.693752638243986 21.539210168378595 14.329182496130574 11 28.154167252943108 24.43951972233948 29.44866563482013 17.957647389897286 12 26.490900989634632 22.04458046057877 33.64464612354017 17.819872426246423 13 22.331269640260775 24.43893344589841 35.840837671779 17.388959242061816 14 18.7725716429811 27.715046198583554 32.92118099526289 20.59120116317246 15 17.176727170395385 24.80828760377093 39.68505229585854 18.329932929975143 16 21.14288729421697 24.421931429107453 33.99992964682707 20.435251629848505 17 21.188030580179166 23.52727358003846 32.87721026218283 22.40748557759955 18 22.0873786407767 25.077974766661974 33.12637774963651 19.708268842924817 19 22.052788330753717 26.16669011772431 31.144763378828383 20.63575817269359 20 22.985554148492096 26.36074761971765 32.015970170254676 18.637728061535576 21 22.263847849538017 27.503400403358192 31.92451104544815 18.308240701655645 22 21.546245485671403 23.8133764832794 31.50825477229023 23.13212325875897 23 20.71021528070916 26.344918155808827 32.03297218704563 20.911894376436376 24 21.560902396698093 24.7619717649266 32.721847005299935 20.955278833075372 25 20.517916608039023 27.471155199099478 31.396862248487405 20.61406594437409 26 20.58651095164392 25.606209840063787 31.497115519909947 22.310163688382346 27 21.463580507480888 26.06878195206604 31.666549411378455 20.80108812907462 28 17.467520285164863 25.860653815487076 35.23111017306881 21.440715726279254 29 22.530603630223723 24.678720510295012 31.738075137188687 21.052600722292574 30 21.24489939496271 25.79030064255898 32.734158810562356 20.23064115191595 31 22.449111204915344 26.081680033769523 30.66694807935838 20.802260681956756 32 22.847779184841237 26.526663852539752 29.456873504995073 21.16868345762394 33 21.030908493973076 24.682824445382487 30.33746071947845 23.948806341165987 34 21.28769757516064 26.249941372355895 31.168214436471086 21.294146616012384 35 21.7121617184935 26.135617466347732 29.520777637071433 22.63144317808733 36 23.145021340462453 26.344918155808827 31.143004549505182 19.367055954223535 37 20.90661788846677 27.005651704891893 31.449040851742417 20.638689554898924 38 19.58808217250598 27.694526523146195 30.279419351812763 22.43797195253506 39 21.092467520285165 26.350780920219503 30.171544486656348 22.385207072838988 40 21.40905679846161 26.731860606913372 30.607147882369496 21.251934712255522 41 19.444444444444446 27.324586088832607 31.33354439285212 21.89742507387083 42 20.36196707471507 26.204211809952625 31.51294498381877 21.92087613151353 43 21.557971014492754 25.136602410768727 30.38377655832278 22.92165001641574 44 20.657450401013087 25.249167487453683 30.518620139768306 23.574761971764925 45 20.788776323812204 25.97321889217204 28.870597063927583 24.367407720088178 46 23.102809436705595 27.389662773791095 28.572182355424232 20.93534543407908 47 19.86890858777731 25.85537732751747 33.12696402607757 21.148750058627645 48 21.0701890155246 26.251700201679096 30.605389053046295 22.07272172975001 49 20.29395900755124 23.957600487782 32.781060925847754 22.967379578819006 50 19.950987289526758 24.556775010552975 32.34956146522208 23.142676234698182 51 20.3127198536654 24.72210496693401 29.569438581680036 25.395736597720557 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 194.0 1 304.0 2 414.0 3 2052.0 4 3690.0 5 2500.5 6 1311.0 7 1156.0 8 1001.0 9 984.0 10 967.0 11 930.5 12 894.0 13 886.5 14 879.0 15 882.0 16 885.0 17 849.5 18 814.0 19 780.5 20 747.0 21 831.5 22 916.0 23 1065.5 24 1215.0 25 1425.0 26 1914.0 27 2193.0 28 2557.5 29 2922.0 30 3351.5 31 3781.0 32 4287.5 33 4794.0 34 5228.0 35 5662.0 36 6024.0 37 6386.0 38 6962.0 39 7538.0 40 8058.5 41 8579.0 42 9302.5 43 10026.0 44 11377.5 45 12729.0 46 14882.5 47 17036.0 48 15218.0 49 13400.0 50 12668.5 51 11937.0 52 10610.5 53 9284.0 54 8545.5 55 7807.0 56 7421.0 57 7035.0 58 6533.0 59 6031.0 60 5558.0 61 5085.0 62 4567.5 63 4050.0 64 3582.5 65 3115.0 66 2612.5 67 2110.0 68 1733.0 69 1356.0 70 1101.5 71 847.0 72 696.5 73 546.0 74 439.5 75 262.5 76 192.0 77 150.0 78 108.0 79 85.5 80 63.0 81 44.5 82 26.0 83 20.5 84 15.0 85 12.0 86 9.0 87 8.0 88 7.0 89 4.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 170568.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.37655363256882 #Duplication Level Percentage of deduplicated Percentage of total 1 78.40300164961347 42.632850241545896 2 8.431357750487877 9.169363538295578 3 3.738045693215021 6.097861263542986 4 2.3310224368995893 5.070118662351672 5 1.6205026469288077 4.405867454622204 6 1.2582345901303518 4.10510764035458 7 0.9865335475315098 3.755100605037287 8 0.7590378332920031 3.301908916092116 9 0.5746692686713604 2.8123680878007598 >10 1.8609365060539735 13.608648750058627 >50 0.015094502366602336 0.5868627175085597 >100 0.01401632362613074 1.361333896158717 >500 0.006469072442829572 2.327517471037944 >1k 0.0010781787404715954 0.7650907555930773 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1305 0.7650907555930773 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCG 857 0.5024389099948408 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTC 762 0.446742648093429 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 734 0.43032690774353927 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCG 601 0.3523521410815628 No Hit GAATCTATCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTC 512 0.300173537826556 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGC 504 0.29548332629801605 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGC 351 0.20578303081468974 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 263 0.15419070400075044 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCT 224 0.13132592279911823 No Hit GCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 193 0.11315135312602598 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCG 177 0.10377093006894611 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06449040851742413 0.0 2 0.0 0.0 0.0 0.4385347779184841 0.0 3 0.0 0.0 0.0 0.5481684723981052 0.0 4 0.0 0.0 0.0 0.7832653252661695 0.0 5 0.0 0.0 0.0 1.7342057126776418 0.0 6 0.0 0.0 0.0 2.0197223394775103 0.0 7 0.0 0.0 0.0 2.4893297687725715 0.0 8 0.0 0.0 0.0 3.345879649172178 0.0 9 0.0 0.0 0.0 3.6079452183293466 0.0 10 0.0 0.0 0.0 5.314009661835748 0.0 11 0.0 0.0 0.0 6.220979316167159 0.0 12 0.0 0.0 0.0 7.581140659443741 0.0 13 0.0 0.0 0.0 7.958116411050138 0.0 14 0.0 0.0 0.0 8.110548285727686 0.0 15 0.0 0.0 0.0 8.455278833075372 0.0 16 0.0 0.0 0.0 9.004619858355612 0.0 17 0.0 0.0 0.0 9.605553210449791 0.0 18 0.0 0.0 0.0 10.292082922939825 0.0 19 0.0 0.0 0.0 10.684301862013976 0.0 20 0.0 0.0 0.0 11.084142394822006 0.0 21 0.0 0.0 0.0 11.547887059706392 0.0 22 0.0 0.0 0.0 12.052084799024437 0.0 23 0.0 0.0 0.0 12.53283148069978 0.0 24 0.0 0.0 0.0 12.920946484686459 0.0 25 0.0 0.0 0.0 13.301439894939262 0.0 26 0.0 0.0 0.0 13.61040757938183 0.0 27 0.0 0.0 0.0 13.958069508934853 0.0 28 0.0 0.0 0.0 14.322733455278833 0.0 29 0.0 0.0 0.0 14.673326767037194 0.0 30 0.0 0.0 0.0 15.063200600347075 0.0 31 0.0 0.0 0.0 15.420242952957178 0.0 32 0.0 0.0 0.0 15.779044134890484 0.0 33 0.0 0.0 0.0 16.13960414614699 0.0 34 0.0 0.0 0.0 16.52127010928193 0.0 35 0.0 0.0 0.0 16.901763519534732 0.0 36 0.0 0.0 0.0 17.27522161249472 0.0 37 0.0 0.0 0.0 17.621124712724544 0.0 38 0.0 0.0 0.0 17.989306317714927 0.0 39 0.0 0.0 0.0 18.380352703906947 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGTTGG 25 3.8767994E-5 45.000004 2 GGCCGGT 25 3.8767994E-5 45.000004 9 ACTTAGG 25 3.8767994E-5 45.000004 3 CATACGA 30 2.1546039E-6 45.000004 18 TAAGGCA 35 1.2038072E-7 45.000004 5 ACATACG 30 2.1546039E-6 45.000004 17 CTAGGAT 25 3.8767994E-5 45.000004 5 TAATACG 45 3.8016879E-10 45.0 4 GTACACT 20 7.0163823E-4 45.0 18 CCATCTA 20 7.0163823E-4 45.0 13 CATAGCC 20 7.0163823E-4 45.0 36 CTACGAA 20 7.0163823E-4 45.0 11 TACGAAT 20 7.0163823E-4 45.0 12 GCCTAAG 20 7.0163823E-4 45.0 2 TCATCGA 20 7.0163823E-4 45.0 16 TAGGCTC 20 7.0163823E-4 45.0 6 CGATGCG 20 7.0163823E-4 45.0 10 GCTACGA 20 7.0163823E-4 45.0 10 ATACGTC 20 7.0163823E-4 45.0 6 TGTACAC 20 7.0163823E-4 45.0 17 >>END_MODULE