SRR2936175.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936175.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	65623
Sequences flagged as poor quality	0
Sequence length	51
%GC	32

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2207	3.363150115051125	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1249	1.9032961004525852	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	470	0.7162123036130624	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	259	0.3946786949697515	No Hit
CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	102	0.15543330844368589	No Hit
GAATCTGTCTCTTATACACATCTGACGCGAACCAGATCGTATGCCGTCTTC	85	0.12952775703640493	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAACCAGATCGTATGCC	68	0.10362220562912393	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGAACCAGATCGTATGC	68	0.10362220562912393	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGATT	40	6.6465873E-9	45.000004	6
TGACTCT	20	6.984699E-4	45.000004	5
GGATTCC	20	6.984699E-4	45.000004	8
AAGGATC	20	6.984699E-4	45.000004	6
TGGGATC	20	6.984699E-4	45.000004	6
AGGATTT	50	2.1827873E-11	45.0	7
AGGATTA	25	3.850591E-5	45.0	7
CTAAGGA	25	3.850591E-5	45.0	4
AAGGGCA	25	3.850591E-5	45.0	5
GCTAAGG	25	3.850591E-5	45.0	3
ACGGGAT	25	3.850591E-5	45.0	5
TTAGGAC	25	3.850591E-5	45.0	5
CGGTTTA	50	2.1827873E-11	45.0	1
CAGGATT	35	1.1886732E-7	45.0	6
CGTTTTA	615	0.0	44.999996	1
CGTTTTT	970	0.0	44.304127	1
CGTTATT	240	0.0	44.062504	1
CGGTTTT	125	0.0	43.2	1
GTTTTAT	675	0.0	40.666668	2
CTTAGGG	45	1.881017E-8	40.0	3