##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936174.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 90273 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.447453834479855 31.0 31.0 34.0 30.0 34.0 2 31.577226856313626 31.0 31.0 34.0 30.0 34.0 3 30.443809333909364 31.0 30.0 34.0 25.0 34.0 4 34.84236704219423 35.0 35.0 37.0 32.0 37.0 5 31.468567567268174 35.0 35.0 37.0 0.0 37.0 6 33.556334673711966 35.0 35.0 37.0 17.0 37.0 7 21.422861763761038 32.0 0.0 37.0 0.0 37.0 8 28.342527666079558 35.0 17.0 37.0 17.0 37.0 9 34.72112370254672 37.0 32.0 39.0 28.0 39.0 10 36.30643714067329 37.0 35.0 39.0 32.0 39.0 11 36.76888992278976 38.0 37.0 39.0 33.0 39.0 12 37.12138734726884 39.0 37.0 39.0 34.0 39.0 13 36.95809378219401 39.0 37.0 39.0 33.0 39.0 14 38.46358268806841 40.0 38.0 41.0 34.0 41.0 15 38.51774063119648 40.0 38.0 41.0 34.0 41.0 16 38.556467603823954 40.0 38.0 41.0 34.0 41.0 17 38.472987493491964 40.0 38.0 41.0 34.0 41.0 18 38.19205077930278 40.0 38.0 41.0 34.0 41.0 19 37.91013924429231 39.0 37.0 41.0 34.0 41.0 20 37.685398734948436 39.0 35.0 40.0 34.0 41.0 21 37.61110187985334 39.0 35.0 40.0 33.0 41.0 22 37.44640147109324 39.0 35.0 40.0 33.0 41.0 23 37.306104815393304 38.0 35.0 40.0 33.0 41.0 24 37.008828774938245 38.0 35.0 40.0 33.0 41.0 25 36.89125209087989 38.0 35.0 40.0 33.0 41.0 26 36.73708639349529 38.0 35.0 40.0 33.0 41.0 27 36.71886389064283 38.0 35.0 40.0 33.0 41.0 28 36.63830824277469 38.0 35.0 40.0 33.0 41.0 29 36.59811903891529 38.0 35.0 40.0 33.0 41.0 30 36.38586288258948 38.0 35.0 40.0 32.0 41.0 31 36.184407297863146 38.0 35.0 40.0 31.0 41.0 32 35.79977401880961 38.0 34.0 40.0 30.0 41.0 33 35.30522969215602 38.0 34.0 40.0 25.0 41.0 34 34.58921272141172 38.0 33.0 40.0 21.0 41.0 35 33.75604001196371 38.0 33.0 40.0 16.0 41.0 36 33.336435035946515 37.0 33.0 40.0 15.0 41.0 37 32.92029732035049 37.0 33.0 40.0 12.0 41.0 38 32.73153656131955 37.0 32.0 40.0 10.0 41.0 39 32.550640833914905 37.0 31.0 40.0 10.0 41.0 40 32.25780687470229 37.0 30.0 40.0 10.0 41.0 41 32.16293908477618 37.0 30.0 40.0 9.0 41.0 42 31.89533969182369 37.0 30.0 40.0 8.0 41.0 43 31.854087047068337 37.0 30.0 40.0 8.0 41.0 44 31.709680635405935 36.0 30.0 40.0 8.0 41.0 45 31.598916619587254 36.0 29.0 40.0 8.0 41.0 46 31.402966556999324 36.0 28.0 40.0 8.0 41.0 47 31.214239030496383 36.0 27.0 40.0 8.0 41.0 48 31.04296965870194 35.0 26.0 40.0 8.0 41.0 49 30.89126316838922 35.0 27.0 40.0 7.0 41.0 50 30.698669591129132 35.0 26.0 40.0 7.0 41.0 51 28.819503062931332 34.0 21.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 1.0 10 3.0 11 3.0 12 2.0 13 4.0 14 2.0 15 2.0 16 7.0 17 21.0 18 40.0 19 96.0 20 166.0 21 333.0 22 583.0 23 992.0 24 1677.0 25 2747.0 26 3261.0 27 3348.0 28 3003.0 29 2711.0 30 2666.0 31 2939.0 32 3587.0 33 4709.0 34 6237.0 35 8073.0 36 8993.0 37 13399.0 38 12761.0 39 7904.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.92517142445693 15.894010390703755 19.763384400651358 29.417433784187963 2 42.671673700885094 25.60787832463749 19.535187708395643 12.185260266081773 3 23.431147740741974 25.101636148128453 40.17369534633833 11.293520764791245 4 20.13226546143365 20.144450721699734 46.015973768457904 13.707310048408717 5 19.393395588935782 31.151063994771416 35.408150831367074 14.047389584925726 6 18.56479789084222 29.852779900967068 40.68990728124688 10.892514926943827 7 35.62527001428999 40.64892049671552 21.01292745339138 2.712882035603115 8 60.60505355975763 8.046702779347092 27.789039912266126 3.5592037486291583 9 55.938098877848304 7.273492627917539 28.190045750113548 8.598362744120612 10 27.628416026940506 26.598207658989953 34.334740177018595 11.438636137050946 11 20.721588957938696 21.10043977712051 42.79020305074607 15.387768214194718 12 18.557043634309263 19.90960752384434 45.51527034661527 16.018078495231133 13 16.076789294694983 21.22450788164789 48.56047766220243 14.138225161454699 14 15.434293753392486 24.59760947348598 43.74286885336701 16.225227919754523 15 13.584349694814618 22.53386948478504 49.35584283229758 14.525937988102754 16 15.629257917649797 23.932958913517886 42.97519745660386 17.462585712228464 17 16.13660784509211 22.283517773863725 43.92010900269184 17.659765378352333 18 16.619587252002262 23.231752572751542 44.074086382417775 16.07457379282842 19 16.35705028081486 24.541114175888694 41.82645973879233 17.275375804504115 20 16.914249000254785 24.341719007898263 43.500271398978654 15.2437605928683 21 17.221096008773387 24.98643005106732 43.03058500326786 14.76188893689143 22 17.157954205576416 21.043944479523226 42.36593444329977 19.43216687160059 23 14.993408881946982 25.461655201444504 43.09261905553156 16.452316861076955 24 16.915356751188064 22.180496937068668 42.84559059741008 18.05855571433319 25 15.559469608853146 27.220763683493406 41.3423725809489 15.877394126704553 26 15.304686894198708 23.592879377000877 42.38033520543241 18.722098523368004 27 16.530967177339846 24.861254195606662 40.87822493990451 17.72955368714898 28 14.225737485183831 23.47213452527334 44.96361038184175 17.338517607701085 29 16.309416990683815 22.723294894375947 43.330785506186785 17.63650260875345 30 15.978199461633046 26.44976903393041 42.49221804969371 15.079813454742835 31 20.274057580893512 23.6194653993996 40.204712372470176 15.901764647236716 32 18.74646904390017 26.55278987072547 40.02747222314535 14.673268862229015 33 19.563989232660926 23.766796273525863 38.89202751653318 17.777186977280028 34 19.815448694515524 23.65380567833128 40.87047068337155 15.66027494378164 35 17.24546652930555 25.94131135555482 39.5334153069024 17.279806808237236 36 23.14977900368881 25.000830813199958 37.12184152515148 14.727548657959744 37 18.335493447653228 28.627607368759207 37.645807716593 15.391091466994562 38 21.08714676592115 26.835266358711905 34.449946274079736 17.627640601287204 39 21.55018665603226 26.833050856845347 35.28740597963954 16.32935650748286 40 20.597520853411318 25.72529992356519 37.58931241899571 16.08786680402778 41 20.780299757402545 27.304952754422697 34.452161775946294 17.462585712228464 42 18.434083280715164 26.31573117100351 38.18528242110044 17.064903127180887 43 21.892481694415828 25.790657228628717 33.58590054612121 18.73096053083425 44 19.865297486513136 25.88149280515769 34.95064969592237 19.30256001240681 45 18.31223067805435 25.603447320904365 34.624970921538 21.459351079503282 46 21.532462641099777 27.226302438159806 33.25579076800372 17.985444152736697 47 18.33217019485339 25.54805977424036 38.28165675229581 17.838113278610436 48 18.868321646560986 26.820865596579264 34.43111450821397 19.879698248645774 49 18.297829915921703 24.193280382838722 38.15315764403531 19.355732057204257 50 18.769731813499053 25.013016073466044 36.435035946517786 19.78221616651712 51 18.94254095909076 24.286331461234255 34.44440751941333 22.32672006026165 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 388.0 1 416.5 2 445.0 3 3673.0 4 6901.0 5 4765.0 6 2629.0 7 2214.0 8 1799.0 9 1719.0 10 1639.0 11 1591.5 12 1544.0 13 1489.0 14 1434.0 15 1331.5 16 1229.0 17 1173.5 18 1118.0 19 1071.5 20 1025.0 21 998.0 22 971.0 23 966.0 24 961.0 25 1015.5 26 1123.5 27 1177.0 28 1329.5 29 1482.0 30 1625.5 31 1769.0 32 1899.5 33 2030.0 34 2302.0 35 2574.0 36 2766.0 37 2958.0 38 3170.0 39 3382.0 40 3658.5 41 3935.0 42 4323.5 43 4712.0 44 5572.5 45 6433.0 46 7975.5 47 9518.0 48 7885.5 49 6253.0 50 5720.0 51 5187.0 52 4384.5 53 3582.0 54 3211.0 55 2840.0 56 2551.0 57 2262.0 58 2085.0 59 1908.0 60 1677.5 61 1447.0 62 1348.5 63 1250.0 64 1080.5 65 911.0 66 745.5 67 580.0 68 469.0 69 358.0 70 300.0 71 242.0 72 189.0 73 136.0 74 112.0 75 79.0 76 70.0 77 43.5 78 17.0 79 12.5 80 8.0 81 6.5 82 5.0 83 4.0 84 3.0 85 2.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 90273.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.74250329555903 #Duplication Level Percentage of deduplicated Percentage of total 1 82.3834374197964 53.337099686506484 2 9.509795534262983 12.313759374342274 3 3.909658653434853 7.593632647635505 4 1.8513132004448627 4.7943460392365385 5 0.941055693386945 3.0463150665204433 6 0.5269911882966892 2.047123724701738 7 0.2994268115322098 1.3569948932681974 8 0.1574129523483617 0.8153046868941987 9 0.087261527932244 0.5084576783755941 >10 0.27889468731285827 3.1227498809167744 >50 0.02053212421935153 0.9449115460879777 >100 0.023954144922576782 3.1881071859803045 >500 0.006844041406450508 2.6076456969415 >1k 0.003422020703225254 4.323551892592469 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2523 2.794855604665847 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1380 1.5286962879266226 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCG 632 0.700098589833062 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTC 608 0.6735125674343381 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGC 559 0.6192327717036101 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 555 0.6148017679704896 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCG 401 0.44420812424534467 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGC 357 0.3954670831810176 No Hit GAATCTATCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTC 356 0.39435933224773745 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 321 0.3555880495829318 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 308 0.34118728745028964 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCG 150 0.16616263999202419 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 146 0.16173163625890355 No Hit GAATCTATCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTT 137 0.1517618778593821 No Hit CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 122 0.13514561386017968 No Hit GAATGACTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCT 119 0.1318223610603392 No Hit GCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 118 0.13071461012705904 TruSeq Adapter, Index 21 (95% over 22bp) GAATATGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTC 118 0.13071461012705904 No Hit GAACTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCT 118 0.13071461012705904 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTT 107 0.11852934986097727 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTC 96 0.1063440895948955 No Hit GAATGAATGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCT 92 0.10191308586177483 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08197356906273194 0.0 2 0.0 0.0 0.0 0.4696863957107884 0.0 3 0.0 0.0 0.0 0.6292025301031317 0.0 4 0.0 0.0 0.0 0.933834036755176 0.0 5 0.0 0.0 0.0 2.1523600633633535 0.0 6 0.0 0.0 0.0 2.616507704407741 0.0 7 0.0 0.0 0.0 3.1415816467825373 0.0 8 0.0 0.0 0.0 4.007842876607624 0.0 9 0.0 0.0 0.0 4.426572729387525 0.0 10 0.0 0.0 0.0 6.438248424224297 0.0 11 0.0 0.0 0.0 7.115084244458476 0.0 12 0.0 0.0 0.0 8.906317503572497 0.0 13 0.0 0.0 0.0 9.290707077420713 0.0 14 0.0 0.0 0.0 9.48456349074474 0.0 15 0.0 0.0 0.0 9.772578733397584 0.0 16 0.0 0.0 0.0 10.186877582444364 0.0 17 0.0 0.0 0.0 10.641055465089229 0.0 18 0.0 0.0 0.0 11.155051898131225 0.0 19 0.0 0.0 0.0 11.449713646383747 0.0 20 0.0 0.0 0.0 11.725543628770508 0.0 21 0.0 0.0 0.0 12.060084410621116 0.0 22 0.0 0.0 0.0 12.44004298073621 0.0 23 0.0 0.0 0.0 12.806708539651945 0.0 24 0.0 0.0 0.0 13.094723782304786 0.0 25 0.0 0.0 0.0 13.348398746025943 0.0 26 0.0 0.0 0.0 13.59764270601398 0.0 27 0.0 0.0 0.0 13.853533171601697 0.0 28 0.0 0.0 0.0 14.129363153988457 0.0 29 0.0 0.0 0.0 14.386361370509455 0.0 30 0.0 0.0 0.0 14.69542388089462 0.0 31 0.0 0.0 0.0 14.997839885680104 0.0 32 0.0 0.0 0.0 15.30801014699855 0.0 33 0.0 0.0 0.0 15.576085872852348 0.0 34 0.0 0.0 0.0 15.844161598706147 0.0 35 0.0 0.0 0.0 16.187564388023 0.0 36 0.0 0.0 0.0 16.4777951325424 0.0 37 0.0 0.0 0.0 16.787965393860844 0.0 38 0.0 0.0 0.0 17.066010878114163 0.0 39 0.0 0.0 0.0 17.357349373566848 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGGCT 55 1.8189894E-12 45.000004 7 ATCTATC 40 6.6957E-9 45.0 3 GTTTATT 35 1.1953671E-7 45.0 3 CGGTTTA 35 1.1953671E-7 45.0 1 GACCGAT 25 3.8622078E-5 45.0 9 ACCGATT 25 3.8622078E-5 45.0 10 CGATTGG 20 6.9987506E-4 45.0 10 AGGCGAT 50 2.1827873E-11 45.0 7 CGTTATT 310 0.0 45.0 1 TTGAGGA 20 6.9987506E-4 45.0 4 AATCTAT 40 6.6957E-9 45.0 2 CGAATGG 20 6.9987506E-4 45.0 2 AAGGGCG 20 6.9987506E-4 45.0 5 TAAGGCG 20 6.9987506E-4 45.0 5 CAGTCTC 20 6.9987506E-4 45.0 6 CGTTTTA 490 0.0 45.0 1 CGAAGGA 20 6.9987506E-4 45.0 4 AAGGCGA 30 2.1432643E-6 44.999996 6 CGTTTTT 910 0.0 43.763737 1 ACGGCTG 115 0.0 43.043476 8 >>END_MODULE