##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936172.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 103385 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.4694878367268 31.0 31.0 34.0 30.0 34.0 2 31.63053634473086 31.0 31.0 34.0 30.0 34.0 3 30.55522561299995 31.0 30.0 34.0 26.0 34.0 4 34.903090390288725 37.0 35.0 37.0 32.0 37.0 5 31.548445132272573 35.0 35.0 37.0 0.0 37.0 6 33.60845383759733 36.0 35.0 37.0 17.0 37.0 7 21.48379358707743 32.0 0.0 37.0 0.0 37.0 8 28.44715384243362 35.0 17.0 37.0 17.0 37.0 9 34.78996953136335 37.0 32.0 39.0 30.0 39.0 10 36.296029404652515 37.0 35.0 39.0 32.0 39.0 11 36.729370798471734 39.0 37.0 39.0 33.0 39.0 12 37.03267398558785 39.0 37.0 39.0 34.0 39.0 13 36.78197997775306 39.0 37.0 39.0 33.0 39.0 14 38.09494607534942 40.0 38.0 41.0 33.0 41.0 15 38.23150360303719 40.0 38.0 41.0 33.0 41.0 16 38.326739855878515 40.0 38.0 41.0 33.0 41.0 17 38.2664022827296 40.0 37.0 41.0 33.0 41.0 18 38.04587706146926 39.0 37.0 41.0 33.0 41.0 19 37.80807660685786 39.0 37.0 41.0 33.0 41.0 20 37.54948977124341 39.0 35.0 41.0 33.0 41.0 21 37.398587802872754 39.0 35.0 40.0 33.0 41.0 22 37.29671615805001 39.0 35.0 40.0 33.0 41.0 23 37.15941384146636 38.0 35.0 40.0 33.0 41.0 24 36.93557092421531 38.0 35.0 40.0 33.0 41.0 25 36.746104367171256 38.0 35.0 40.0 32.0 41.0 26 36.62598055810804 38.0 35.0 40.0 32.0 41.0 27 36.55457754993471 38.0 35.0 40.0 32.0 41.0 28 36.4363785849011 38.0 35.0 40.0 32.0 41.0 29 36.374793248537024 38.0 35.0 40.0 32.0 41.0 30 36.128006964259804 38.0 35.0 40.0 31.0 41.0 31 35.9104512259999 38.0 34.0 40.0 30.0 41.0 32 35.618184456159014 38.0 34.0 40.0 29.0 41.0 33 35.148812690428976 38.0 34.0 40.0 25.0 41.0 34 34.486366494172266 37.0 33.0 40.0 22.0 41.0 35 33.864767616191905 37.0 33.0 40.0 18.0 41.0 36 33.42487788363883 37.0 33.0 40.0 15.0 41.0 37 33.08229433670262 37.0 32.0 40.0 15.0 41.0 38 32.86012477632152 37.0 32.0 40.0 11.0 41.0 39 32.70943560477826 37.0 32.0 40.0 10.0 41.0 40 32.555428737244284 37.0 31.0 40.0 10.0 41.0 41 32.391933065725205 36.0 31.0 40.0 10.0 41.0 42 32.19469942448131 36.0 31.0 40.0 10.0 41.0 43 32.098853798907 36.0 30.0 40.0 10.0 41.0 44 31.96282826328771 36.0 30.0 40.0 10.0 41.0 45 31.883783914494366 35.0 30.0 40.0 10.0 41.0 46 31.752575325240606 35.0 30.0 40.0 10.0 41.0 47 31.640847318276347 35.0 29.0 40.0 9.0 41.0 48 31.529825409875706 35.0 29.0 40.0 8.0 41.0 49 31.397359384823716 35.0 28.0 40.0 8.0 41.0 50 31.217971659331624 35.0 28.0 40.0 8.0 41.0 51 29.6037432896455 34.0 24.0 38.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 5.0 10 3.0 11 5.0 12 7.0 13 2.0 14 1.0 15 3.0 16 9.0 17 33.0 18 52.0 19 125.0 20 200.0 21 364.0 22 678.0 23 1106.0 24 1861.0 25 2698.0 26 3397.0 27 3622.0 28 3363.0 29 3204.0 30 3171.0 31 3563.0 32 4340.0 33 6050.0 34 7577.0 35 9518.0 36 10136.0 37 15000.0 38 14372.0 39 8915.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.44198868307782 17.12240653866615 20.61904531605165 28.81655946220438 2 44.65057793683803 21.240992407022297 20.65967016491754 13.448759491222132 3 27.01939352904193 20.663539198142864 39.53184697973594 12.785220293079266 4 23.286743724911737 20.694491463945447 41.29515887217681 14.723605938966 5 18.975673453595782 31.77636987957634 35.10664022827296 14.141316438554915 6 20.417855588334866 28.534120036755816 39.99322919185568 11.054795183053635 7 38.11868259418677 40.61324176621366 18.61682062194709 2.6512550176524643 8 64.00928567974078 5.774532088794312 26.445809353387823 3.7703728780770907 9 58.49301155873676 6.978768680176041 28.25071335300092 6.277506408086279 10 33.717657300382065 20.525221260337574 34.31929196691977 11.437829472360594 11 26.16723896116458 20.21666586061808 38.99985491125405 14.616240266963294 12 23.842917251051894 18.502684141800067 42.20728345504667 15.447115152101368 13 20.245683609807998 19.916815785655558 43.92319969047735 15.914300914059098 14 17.28877496735503 21.68496396962809 44.396189002273054 16.63007206074382 15 16.629104802437492 20.448807854137446 47.29409488803985 15.627992455385211 16 20.74285437926198 20.53489384340088 43.00623881607583 15.716012961261306 17 20.032886782415243 20.939207815447112 41.598877980364655 17.429027421772986 18 21.312569521690765 20.570682400735116 42.50713353000919 15.609614547564926 19 19.754316390192 22.557430961938387 40.791217294578516 16.897035353291095 20 20.159597620544567 23.63592397349712 41.6694878367268 14.534990569231512 21 19.42641582434589 23.22193741838758 42.82826328771098 14.523383469555545 22 18.897325530782997 19.90520868597959 43.17937805290903 18.018087730328382 23 18.283116506263 22.18020022246941 43.10103013009624 16.43565314117135 24 18.653576437587656 21.12588866856894 42.91725105189341 17.303283841949995 25 18.47946994244813 22.683174541761378 41.207138366300725 17.63021714948977 26 17.64569328239106 21.227450790733666 41.56308942303042 19.56376650384485 27 17.183343811964985 21.459592784253033 43.17647627799004 18.18058712579194 28 15.780819267785462 22.59225226096629 42.676403733617065 18.950524737631184 29 18.570392223243218 22.487788363882576 40.99143976398897 17.950379648885235 30 18.486240750592444 21.84843062339798 42.88726604439715 16.778062581612417 31 20.052231948541856 21.85133239831697 40.97112733955603 17.125308313585144 32 20.457513178894423 22.4162112492141 40.0599700149925 17.06630555689897 33 19.6691976592349 22.601924844029597 39.82492624655414 17.90395125018136 34 18.336315713111187 23.76650384485177 40.63548870725928 17.261691734777774 35 18.322774096822556 25.607196401799097 39.133336557527684 16.936692943850655 36 20.481694636552692 26.747593944963004 36.02843739420612 16.742274024278185 37 18.959230062388162 27.335686995212072 36.2073801808773 17.497702761522465 38 19.782366881075593 27.607486579291002 34.51661266141123 18.09353387822218 39 20.341442182134738 26.442907578468834 34.31832470861343 18.897325530782997 40 21.926778546210766 24.81211007399526 35.48193645112928 17.779174928664702 41 19.840402379455433 25.08874594960584 34.5659428350341 20.50490883590463 42 20.649997581854233 24.39715626057939 35.62412342215989 19.32872273540649 43 20.65580113169222 24.173719591816994 35.55738259902307 19.613096677467716 44 19.68467379213619 24.71731875997485 35.47710015959762 20.12090728829134 45 19.632441843594332 25.046186584127287 34.53982686076317 20.78154471151521 46 20.17604101175219 25.558833486482563 34.488562170527636 19.776563331237607 47 18.695168544759877 25.332495042801177 36.92218406925569 19.050152343183246 48 19.47961503119408 25.697151424287856 35.539004691202784 19.284228853315277 49 19.66726314262224 24.86530928084345 36.00812496977318 19.459302606761135 50 18.331479421579534 24.874014605600426 35.94235140494269 20.852154567877353 51 18.59940997243314 23.96092276442424 35.26527059051119 22.174396672631428 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 152.0 1 242.0 2 332.0 3 4546.0 4 8760.0 5 5713.0 6 2666.0 7 2232.0 8 1798.0 9 1690.5 10 1583.0 11 1534.0 12 1485.0 13 1401.5 14 1318.0 15 1222.0 16 1126.0 17 1062.5 18 999.0 19 958.5 20 918.0 21 903.0 22 888.0 23 947.5 24 1007.0 25 1110.0 26 1301.5 27 1390.0 28 1530.0 29 1670.0 30 1826.5 31 1983.0 32 2183.0 33 2383.0 34 2564.5 35 2746.0 36 2883.5 37 3021.0 38 3253.0 39 3485.0 40 3681.5 41 3878.0 42 4103.5 43 4329.0 44 4932.0 45 5535.0 46 6376.5 47 7218.0 48 6955.0 49 6692.0 50 6554.5 51 6417.0 52 5867.5 53 5318.0 54 5030.5 55 4743.0 56 4484.0 57 4225.0 58 4041.5 59 3858.0 60 3466.5 61 3075.0 62 2712.5 63 2350.0 64 2069.0 65 1788.0 66 1434.5 67 1081.0 68 926.5 69 772.0 70 634.5 71 497.0 72 391.0 73 285.0 74 224.5 75 128.5 76 93.0 77 83.5 78 74.0 79 51.0 80 28.0 81 26.0 82 24.0 83 15.0 84 6.0 85 5.0 86 4.0 87 4.0 88 4.0 89 3.0 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 103385.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.81322242104754 #Duplication Level Percentage of deduplicated Percentage of total 1 81.0540703399421 53.344295594138416 2 10.148292941020856 13.357837210427045 3 4.197469172998633 8.287469168641486 4 1.991446333828133 5.242540020312425 5 1.061124909980747 3.4918024858538477 6 0.5878808365544305 2.3214199351936937 7 0.3233344601049367 1.4895777917492867 8 0.1719551446921709 0.9053537747255404 9 0.12198527358504431 0.722541954829037 >10 0.3218647580135507 3.4618174783575957 >50 0.0044091062741582285 0.19441891957247184 >100 0.011757616731088608 1.4876432751366253 >500 0.001469702091386076 0.7380180877303284 >1k 0.002939404182772152 4.955264303332204 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3291 3.183247086134352 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1832 1.7720172171978528 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 763 0.7380180877303284 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 356 0.34434395705373116 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCG 241 0.23310925182570005 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTC 205 0.19828795279779465 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGC 182 0.17604101175218842 No Hit CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 175 0.16927020360787348 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCG 154 0.14895777917492867 No Hit GAATCTATCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTC 117 0.11316922184069254 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGC 108 0.1044638970837162 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0512646902355274 0.0 2 0.0 0.0 0.0 0.24278183488900712 0.0 3 0.0 0.0 0.0 0.31435894955747934 0.0 4 0.0 0.0 0.0 0.4284954297045026 0.0 5 0.0 0.0 0.0 0.910190066257194 0.0 6 0.0 0.0 0.0 1.2332543405716496 0.0 7 0.0 0.0 0.0 1.5621221647240895 0.0 8 0.0 0.0 0.0 2.2846641195531268 0.0 9 0.0 0.0 0.0 2.67350195869807 0.0 10 0.0 0.0 0.0 3.7249117376795473 0.0 11 0.0 0.0 0.0 4.494849349518789 0.0 12 0.0 0.0 0.0 5.405039415775983 0.0 13 0.0 0.0 0.0 5.709725782270155 0.0 14 0.0 0.0 0.0 5.883832277409682 0.0 15 0.0 0.0 0.0 6.1266141122986895 0.0 16 0.0 0.0 0.0 6.459350969676452 0.0 17 0.0 0.0 0.0 6.835614450839096 0.0 18 0.0 0.0 0.0 7.259273589011945 0.0 19 0.0 0.0 0.0 7.548483822604827 0.0 20 0.0 0.0 0.0 7.871548096919282 0.0 21 0.0 0.0 0.0 8.229433670261644 0.0 22 0.0 0.0 0.0 8.61053344295594 0.0 23 0.0 0.0 0.0 8.975189824442618 0.0 24 0.0 0.0 0.0 9.243120375296224 0.0 25 0.0 0.0 0.0 9.495574793248537 0.0 26 0.0 0.0 0.0 9.76157082748948 0.0 27 0.0 0.0 0.0 10.07496251874063 0.0 28 0.0 0.0 0.0 10.343860327900567 0.0 29 0.0 0.0 0.0 10.619528945204816 0.0 30 0.0 0.0 0.0 10.98031629346617 0.0 31 0.0 0.0 0.0 11.231803453112153 0.0 32 0.0 0.0 0.0 11.52778449484935 0.0 33 0.0 0.0 0.0 11.838274411181507 0.0 34 0.0 0.0 0.0 12.151666102432655 0.0 35 0.0 0.0 0.0 12.465057793683803 0.0 36 0.0 0.0 0.0 12.751366252357693 0.0 37 0.0 0.0 0.0 13.07636504328481 0.0 38 0.0 0.0 0.0 13.465202882429752 0.0 39 0.0 0.0 0.0 14.054263190985152 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGA 30 2.146313E-6 45.000004 13 ACGCCGG 30 2.146313E-6 45.000004 27 CAACGAG 35 1.1976408E-7 45.000004 14 CACGCCG 30 2.146313E-6 45.000004 26 GTAGGAT 35 1.1976408E-7 45.000004 33 TGAAACG 30 2.146313E-6 45.000004 4 AACGAGC 30 2.146313E-6 45.000004 15 CGGTAGT 30 2.146313E-6 45.000004 12 ATGGGAT 20 7.003494E-4 45.0 5 CGTATGG 20 7.003494E-4 45.0 2 CGGTTTA 25 3.8661325E-5 45.0 1 TATGGGT 20 7.003494E-4 45.0 4 TATGGGA 25 3.8661325E-5 45.0 4 AGGGTTC 20 7.003494E-4 45.0 7 CAATTAA 20 7.003494E-4 45.0 32 CTACGGG 20 7.003494E-4 45.0 3 CTACGAA 25 3.8661325E-5 45.0 11 GGAACAC 40 6.712071E-9 45.0 8 CGAATAT 25 3.8661325E-5 45.0 14 GCGATGA 20 7.003494E-4 45.0 9 >>END_MODULE