SRR2936170.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936170.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	116836
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2434	2.083262008285118	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1350	1.155465781094868	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	530	0.4536273066520593	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	473	0.40484097367249827	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCG	428	0.3663254476360026	No Hit
GAATCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTC	379	0.3243863192851518	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	296	0.25334657126228216	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCG	287	0.24564346605498305	No Hit
GAATCTATCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTC	272	0.23280495737615117	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGC	238	0.20370433770413227	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGC	181	0.1549180047245712	No Hit
GCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC	156	0.1335204902598514	No Hit
CCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC	131	0.11212297579513164	No Hit
CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	130	0.11126707521654286	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTGGGA	35	1.1994416E-7	45.000004	4
ACGTCTC	30	2.148734E-6	45.000004	34
ATAACGT	30	2.148734E-6	45.000004	31
TGATGGG	30	2.148734E-6	45.000004	3
AATAACG	30	2.148734E-6	45.000004	30
TTTAGGT	20	7.007261E-4	45.0	4
ATGGGCG	20	7.007261E-4	45.0	5
GGTGTGA	20	7.007261E-4	45.0	8
GGCACTA	25	3.869248E-5	45.0	8
TACGGCT	25	3.869248E-5	45.0	7
TGAAACG	20	7.007261E-4	45.0	4
CGTTATT	195	0.0	45.0	1
AAACGGC	20	7.007261E-4	45.0	6
AACGGCT	20	7.007261E-4	45.0	7
AGGCACC	25	3.869248E-5	45.0	7
GAAACGG	20	7.007261E-4	45.0	5
TAGGCAC	20	7.007261E-4	45.0	6
TCGAAAG	20	7.007261E-4	45.0	1
CCACAGG	25	3.869248E-5	45.0	3
CGTTTTA	460	0.0	44.02174	1