SRR2936168.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936168.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	217766
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6789	3.117566562273266	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3811	1.7500436248082805	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1496	0.6869759282899994	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCG	882	0.40502190424584184	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGC	878	0.4031850702129809	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTC	834	0.3829798958515103	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	704	0.3232827897835291	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCG	658	0.30215919840562805	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGC	605	0.27782114747022035	No Hit
GAATCTATCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTC	530	0.2433805093540773	No Hit
CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	295	0.13546650992349588	No Hit
GCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC	285	0.13087442484134348	No Hit
GAACTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCT	251	0.1152613355620253	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAATACG	30	2.1573742E-6	45.000004	4
ATCTATC	140	0.0	45.000004	3
CAATTGG	30	2.1573742E-6	45.000004	2
AATCTAT	140	0.0	45.000004	2
CATACGA	30	2.1573742E-6	45.000004	18
TAGGCGA	30	2.1573742E-6	45.000004	6
GTGCATA	20	7.020683E-4	45.0	1
GTCGACA	20	7.020683E-4	45.0	9
TTCAGAC	20	7.020683E-4	45.0	26
GCGTTAG	25	3.8803617E-5	45.0	2
TACGAAA	25	3.8803617E-5	45.0	20
ATACGAA	25	3.8803617E-5	45.0	19
TCGACAC	20	7.020683E-4	45.0	10
CGGTTTA	115	0.0	44.999996	1
CGTTATT	545	0.0	44.999996	1
CGTTTTA	1345	0.0	44.665424	1
CGTTTTT	2370	0.0	43.860756	1
GAATCTA	145	0.0	43.448273	1
GTTATTT	590	0.0	42.711864	2
AAACGGC	180	0.0	42.5	6