##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936168.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 217766 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.41233250369663 31.0 31.0 34.0 30.0 34.0 2 31.55896696453992 31.0 31.0 34.0 30.0 34.0 3 30.425589853328802 31.0 30.0 34.0 25.0 34.0 4 34.82211180808758 35.0 35.0 37.0 32.0 37.0 5 31.650018827548838 35.0 35.0 37.0 10.0 37.0 6 33.61558278151777 35.0 35.0 37.0 19.0 37.0 7 21.302172974660873 32.0 0.0 37.0 0.0 37.0 8 28.27873497240157 35.0 17.0 37.0 17.0 37.0 9 34.70282321390851 37.0 32.0 39.0 28.0 39.0 10 36.2372776282799 37.0 35.0 39.0 32.0 39.0 11 36.69456205284572 38.0 35.0 39.0 33.0 39.0 12 37.025031455782816 39.0 37.0 39.0 34.0 39.0 13 36.82563852943068 39.0 37.0 39.0 33.0 39.0 14 38.170182673144566 40.0 38.0 41.0 33.0 41.0 15 38.26907322538872 40.0 38.0 41.0 33.0 41.0 16 38.35906431674366 40.0 38.0 41.0 33.0 41.0 17 38.2947567572532 40.0 38.0 41.0 33.0 41.0 18 38.02376863238522 39.0 37.0 41.0 33.0 41.0 19 37.75688583158069 39.0 37.0 40.0 33.0 41.0 20 37.52421406463819 39.0 35.0 40.0 33.0 41.0 21 37.41336572284011 39.0 35.0 40.0 33.0 41.0 22 37.28890644085853 39.0 35.0 40.0 33.0 41.0 23 37.154840516885095 38.0 35.0 40.0 33.0 41.0 24 36.881110917223076 38.0 35.0 40.0 33.0 41.0 25 36.71282936730252 38.0 35.0 40.0 32.0 41.0 26 36.56872514533949 38.0 35.0 40.0 32.0 41.0 27 36.51410229328729 38.0 35.0 40.0 32.0 41.0 28 36.321661783749526 38.0 35.0 40.0 31.0 41.0 29 36.27660424492345 38.0 35.0 40.0 31.0 41.0 30 36.03116188936749 38.0 34.0 40.0 31.0 41.0 31 35.661407198552574 38.0 34.0 40.0 30.0 41.0 32 35.31847487670252 37.0 34.0 40.0 27.0 41.0 33 34.75645876766805 37.0 33.0 40.0 24.0 41.0 34 34.02045314695591 37.0 33.0 40.0 21.0 41.0 35 33.27251269711525 37.0 33.0 40.0 15.0 41.0 36 32.644466996684514 37.0 31.0 40.0 12.0 41.0 37 32.42400558397546 37.0 31.0 40.0 10.0 41.0 38 31.97139590202327 36.0 30.0 40.0 9.0 41.0 39 31.829904576471993 36.0 30.0 40.0 9.0 41.0 40 31.658381014483435 36.0 29.0 40.0 9.0 41.0 41 31.473811338776486 36.0 28.0 40.0 8.0 41.0 42 31.352020058227637 35.0 28.0 40.0 8.0 41.0 43 31.158266212356384 35.0 27.0 40.0 8.0 41.0 44 30.94813699108217 35.0 26.0 40.0 8.0 41.0 45 30.823567499058623 35.0 26.0 40.0 8.0 41.0 46 30.581119182976224 35.0 25.0 40.0 8.0 41.0 47 30.515117144090446 35.0 25.0 40.0 8.0 41.0 48 30.302016843768083 35.0 24.0 40.0 7.0 41.0 49 30.22203190580715 35.0 24.0 39.0 7.0 41.0 50 30.03840360754204 35.0 24.0 39.0 7.0 41.0 51 28.24624597044534 33.0 20.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 9.0 11 7.0 12 4.0 13 10.0 14 2.0 15 11.0 16 24.0 17 54.0 18 126.0 19 204.0 20 462.0 21 835.0 22 1595.0 23 2745.0 24 4721.0 25 7002.0 26 8641.0 27 8868.0 28 8129.0 29 7330.0 30 7164.0 31 7786.0 32 9375.0 33 12257.0 34 15286.0 35 18659.0 36 20760.0 37 30364.0 38 28264.0 39 17064.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.03026184069139 15.547422462643388 19.172414426494495 30.24990127017073 2 44.91702102256551 22.674338510143915 19.53748519052561 12.871155276764966 3 25.31157297282404 22.055784649577987 40.45626957376267 12.17637280383531 4 21.35089958946759 18.793567407216923 45.09703075778588 14.758502245529606 5 19.429111982586814 29.800336140628016 36.839084154551216 13.93146772223396 6 19.216957651791372 27.97544152898065 40.856240184418134 11.951360634809841 7 36.57733530486853 40.38922513156324 20.398501143429186 2.6349384201390484 8 62.4440913641248 5.909554292221926 27.661802117869637 3.984552225783639 9 58.386065777026715 5.072876390253759 28.923247889936903 7.61780994278262 10 31.774014308937115 19.743210602206037 35.455488919298695 13.027286169558149 11 23.74107987472792 20.261657007981043 40.50999696922384 15.487266148067192 12 20.84071893684046 17.715805038435754 44.900948724777976 16.542527299945814 13 18.61906817409513 18.173635921126348 47.79947282863257 15.407823076145954 14 16.278023199213834 20.24374787616065 45.92773894914725 17.550489975478264 15 14.654721122672962 19.936078175656437 49.651001533756414 15.758199167914183 16 18.065721921695765 20.408144522101708 43.58853080829881 17.937602747903714 17 18.14929787019094 19.781324908387905 44.218564881570124 17.850812339851032 18 18.568096029683236 19.86352323135843 44.88487642699044 16.68350431196789 19 17.520641422444275 22.074612198414812 42.634754736735765 17.76999164240515 20 18.187871384881017 22.28447048666918 44.11799821827099 15.409659910178815 21 18.192004261454954 23.321822506727404 43.34469109043652 15.141482141381116 22 17.333743559600673 19.603611215708604 44.09366016733558 18.96898505735514 23 16.409816041071608 22.643571540093497 44.02523809961151 16.921374319223386 24 18.147461036158077 20.763571907460303 42.07497956522138 19.013987491160236 25 17.064188165278328 24.06160741346216 41.342541994618074 17.53166242664144 26 17.556459686085063 20.605144972126045 42.01757850169448 19.820816840094412 27 18.18098325725779 20.820972970987206 42.22192628785026 18.77611748390474 28 15.593802521973126 20.84944389849655 44.77604401054342 18.780709568986893 29 20.06419734944849 20.805819090216104 41.79256633266901 17.337417227666393 30 20.303904190736848 20.571622751026332 42.68251242159015 16.441960636646677 31 20.515140104515854 19.60269279869217 42.58010892425815 17.302058172533822 32 21.163542518115776 20.524783483188376 41.474794044984066 16.836879953711783 33 20.49585334717082 19.89658624394993 41.10007990228043 18.507480506598824 34 20.40676689657706 19.82770496771764 43.10682108318103 16.658707052524267 35 19.710606798122758 21.58968801373952 39.81337766226133 18.8863275258764 36 21.77566745956669 22.30513486953886 39.60030491444945 16.318892756444992 37 19.31385064702479 23.213449298788607 40.03379774620464 17.438902307981962 38 20.526620317221237 23.9362434907194 37.518253538201556 18.01888265385781 39 20.076595979170303 22.133850095974577 39.24809198864836 18.541461936206755 40 21.635608864561043 22.302838826997785 36.75504899754783 19.306503310893344 41 18.33022602242774 23.372794651139298 37.78229843042532 20.514680896007643 42 19.177465720084864 23.04537898478183 37.9292451530542 19.84791014207911 43 20.20379673594592 22.787303803164864 36.87582083520844 20.133078625680774 44 20.61800281035607 22.778578841508775 36.327525876399434 20.275892471735716 45 19.731730389500658 23.156966652278133 35.09225498930044 22.01904796892077 46 21.293957734448902 24.159878034220217 34.9191333817033 19.627030849627584 47 18.285682797130864 23.731895704563613 38.69658257028186 19.285838928023658 48 19.427734357062167 24.635158840222992 35.63412102899443 20.302985773720415 49 19.241754911234995 22.573771846844778 38.118439058438874 20.066034183481353 50 18.899185364106426 22.6587254208646 37.026900434411246 21.41518878061773 51 18.812854164561962 21.877611748390475 35.91607505303858 23.39345903400898 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 124.0 1 308.0 2 492.0 3 9472.0 4 18452.0 5 12197.0 6 5942.0 7 5101.5 8 4261.0 9 3923.5 10 3586.0 11 3434.5 12 3283.0 13 3106.5 14 2930.0 15 2792.0 16 2654.0 17 2464.0 18 2274.0 19 2129.5 20 1985.0 21 1883.0 22 1781.0 23 1816.5 24 1852.0 25 2010.0 26 2445.5 27 2723.0 28 2932.0 29 3141.0 30 3297.0 31 3453.0 32 3930.5 33 4408.0 34 4789.0 35 5170.0 36 5487.0 37 5804.0 38 6177.0 39 6550.0 40 6900.0 41 7250.0 42 8161.0 43 9072.0 44 10800.5 45 12529.0 46 15617.5 47 18706.0 48 17091.5 49 15477.0 50 15021.0 51 14565.0 52 12966.0 53 11367.0 54 10516.5 55 9666.0 56 9155.0 57 8644.0 58 7981.5 59 7319.0 60 6607.5 61 5896.0 62 5146.0 63 4396.0 64 3920.0 65 3444.0 66 2909.5 67 2375.0 68 1955.0 69 1535.0 70 1303.0 71 1071.0 72 850.5 73 630.0 74 510.5 75 297.0 76 203.0 77 154.5 78 106.0 79 73.5 80 41.0 81 31.5 82 22.0 83 19.0 84 16.0 85 10.0 86 4.0 87 2.5 88 1.0 89 2.0 90 3.0 91 2.0 92 1.0 93 2.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 217766.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.070060255875966 #Duplication Level Percentage of deduplicated Percentage of total 1 74.17920932406516 40.85053527209504 2 12.631920757705231 13.912812745485548 3 5.796092569101371 9.575735010871423 4 3.1396277909501378 6.915979665145873 5 1.6727491871968856 4.605919926595002 6 0.9391523419106809 3.103150563508093 7 0.5675506778000567 2.1878535017298657 8 0.3010032654489186 1.32610143723899 9 0.17664641142546283 0.8755135669066043 >10 0.543745553918584 4.8535499899129295 >50 0.027631308931525288 1.046683219599237 >100 0.014802486927602831 1.4059031615281548 >500 0.006907827232881322 2.766700036853435 >1k 0.0019736649236803774 2.8840850708271812 >5k 9.868324618401887E-4 3.6894768317026068 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6789 3.117566562273266 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3811 1.7500436248082805 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1496 0.6869759282899994 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCG 882 0.40502190424584184 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGC 878 0.4031850702129809 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTC 834 0.3829798958515103 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 704 0.3232827897835291 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCG 658 0.30215919840562805 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGC 605 0.27782114747022035 No Hit GAATCTATCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTC 530 0.2433805093540773 No Hit CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 295 0.13546650992349588 No Hit GCTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCTGC 285 0.13087442484134348 No Hit GAACTGTCTCTTATACACATCTGACGCGGTTGTCTTCGTATGCCGTCTTCT 251 0.1152613355620253 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06888127623228603 0.0 2 0.0 0.0 0.0 0.4628821762809621 0.0 3 0.0 0.0 0.0 0.5597751715143778 0.0 4 0.0 0.0 0.0 0.8362186934599525 0.0 5 0.0 0.0 0.0 1.6660084678048914 0.0 6 0.0 0.0 0.0 2.0962868400025716 0.0 7 0.0 0.0 0.0 2.6404489222376313 0.0 8 0.0 0.0 0.0 3.58504082363638 0.0 9 0.0 0.0 0.0 4.227473526629502 0.0 10 0.0 0.0 0.0 6.32789324320601 0.0 11 0.0 0.0 0.0 7.334478293213817 0.0 12 0.0 0.0 0.0 9.063398326644196 0.0 13 0.0 0.0 0.0 9.514800290219776 0.0 14 0.0 0.0 0.0 9.79629510575572 0.0 15 0.0 0.0 0.0 10.09432142758741 0.0 16 0.0 0.0 0.0 10.413471340797003 0.0 17 0.0 0.0 0.0 10.769817143172029 0.0 18 0.0 0.0 0.0 11.17392063040144 0.0 19 0.0 0.0 0.0 11.425107684395176 0.0 20 0.0 0.0 0.0 11.657467189552088 0.0 21 0.0 0.0 0.0 11.893500362774722 0.0 22 0.0 0.0 0.0 12.200710854770717 0.0 23 0.0 0.0 0.0 12.493226674503825 0.0 24 0.0 0.0 0.0 12.71364675844714 0.0 25 0.0 0.0 0.0 12.916157710570062 0.0 26 0.0 0.0 0.0 13.117291037168336 0.0 27 0.0 0.0 0.0 13.368018882653859 0.0 28 0.0 0.0 0.0 13.597163928253263 0.0 29 0.0 0.0 0.0 13.82217609727873 0.0 30 0.0 0.0 0.0 14.144999678554043 0.0 31 0.0 0.0 0.0 14.392972272990274 0.0 32 0.0 0.0 0.0 14.658853999246897 0.0 33 0.0 0.0 0.0 14.910959470257065 0.0 34 0.0 0.0 0.0 15.153421562594712 0.0 35 0.0 0.0 0.0 15.41792566332669 0.0 36 0.0 0.0 0.0 15.647989125942525 0.0 37 0.0 0.0 0.0 15.894124886345894 0.0 38 0.0 0.0 0.0 16.17056840829147 0.0 39 0.0 0.0 0.0 16.537476006355444 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 30 2.1573742E-6 45.000004 4 ATCTATC 140 0.0 45.000004 3 CAATTGG 30 2.1573742E-6 45.000004 2 AATCTAT 140 0.0 45.000004 2 CATACGA 30 2.1573742E-6 45.000004 18 TAGGCGA 30 2.1573742E-6 45.000004 6 GTGCATA 20 7.020683E-4 45.0 1 GTCGACA 20 7.020683E-4 45.0 9 TTCAGAC 20 7.020683E-4 45.0 26 GCGTTAG 25 3.8803617E-5 45.0 2 TACGAAA 25 3.8803617E-5 45.0 20 ATACGAA 25 3.8803617E-5 45.0 19 TCGACAC 20 7.020683E-4 45.0 10 CGGTTTA 115 0.0 44.999996 1 CGTTATT 545 0.0 44.999996 1 CGTTTTA 1345 0.0 44.665424 1 CGTTTTT 2370 0.0 43.860756 1 GAATCTA 145 0.0 43.448273 1 GTTATTT 590 0.0 42.711864 2 AAACGGC 180 0.0 42.5 6 >>END_MODULE