SRR2936167.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936167.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	148030
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4823	3.2581233533743164	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2729	1.8435452273187867	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1082	0.7309329190029048	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	496	0.33506721610484363	No Hit
CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	213	0.14388975207728164	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATCTC	25	3.874299E-5	45.0	5
CGGTTTA	90	0.0	45.0	1
TATGGGT	20	7.013362E-4	45.0	4
TCGGAAG	20	7.013362E-4	45.0	1
TACGAAT	50	2.1827873E-11	45.0	12
CGAATAT	50	2.1827873E-11	45.0	14
GGCGATT	25	3.874299E-5	45.0	8
TAGGAAC	20	7.013362E-4	45.0	6
GATTAGC	20	7.013362E-4	45.0	9
CTAGGAT	20	7.013362E-4	45.0	5
ACGAAAG	20	7.013362E-4	45.0	1
CGTTTTA	875	0.0	44.742855	1
CGTTATT	345	0.0	44.347824	1
CGTTTTT	1480	0.0	43.783783	1
GTTTTAT	925	0.0	43.2973	2
GCTACGA	55	6.002665E-11	40.909092	10
AGCTACG	55	6.002665E-11	40.909092	9
TACTGAC	50	1.0677468E-9	40.5	20
GTTATTT	385	0.0	40.324673	2
CGGTTTT	185	0.0	40.135136	1