SRR2936166.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936166.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	72765
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2097	2.8818800247371676	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1249	1.7164845736274308	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	478	0.6569092283377997	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	221	0.30371744657458943	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG	161	0.22126022126022124	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC	118	0.16216587645159075	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG	113	0.15529444100872672	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	97	0.1333058475915619	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGC	94	0.12918298632584346	No Hit
CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	86	0.11818868961726106	No Hit
GAATCTATCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC	78	0.10719439290867862	No Hit
CCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	76	0.10444581873153302	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTCACT	40	6.664777E-9	45.000004	3
CTGTCAC	40	6.664777E-9	45.000004	2
ATAGGAT	20	6.989753E-4	45.000004	5
GTCACTT	40	6.664777E-9	45.000004	4
TCACTTA	40	6.664777E-9	45.000004	5
AAGGGCG	20	6.989753E-4	45.000004	5
GTAAGGC	20	6.989753E-4	45.000004	4
ACACGCG	25	3.8547674E-5	45.0	36
CGGTTTA	25	3.8547674E-5	45.0	1
CACGCGG	25	3.8547674E-5	45.0	37
CGTTATT	180	0.0	45.0	1
CGTTTTT	665	0.0	43.984962	1
CGTTTTA	415	0.0	42.831326	1
GTTTTAT	450	0.0	41.0	2
CTTAATC	50	1.0513759E-9	40.5	11
ATGGGAT	50	1.0513759E-9	40.5	5
TGAAGGG	45	1.8859282E-8	40.0	3
GACCCGC	45	1.8859282E-8	40.0	31
ACGGGGG	45	1.8859282E-8	40.0	5
ATCAACG	45	1.8859282E-8	40.0	15