SRR2936165.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936165.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	86465
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2032	2.350083848956225	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1161	1.3427398369282368	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	451	0.5215983345862487	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	254	0.2937604811195281	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCG	143	0.16538483779563984	No Hit
GAATCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTC	125	0.1445671659052796	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGC	108	0.12490603134216156	No Hit
CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	93	0.10755797143352801	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCG	92	0.10640143410628577	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGGATT	20	6.997106E-4	45.0	6
CTGTCAC	20	6.997106E-4	45.0	2
ATCTATC	20	6.997106E-4	45.0	3
CTATCTC	35	1.1945849E-7	45.0	5
CGGTTTT	70	0.0	45.0	1
CGGTTTA	20	6.997106E-4	45.0	1
AATGGGT	20	6.997106E-4	45.0	4
TACGGGA	25	3.8608472E-5	45.0	4
TGCGGGA	20	6.997106E-4	45.0	4
CTGCGGG	25	3.8608472E-5	45.0	3
GTCACTT	20	6.997106E-4	45.0	4
GACGGGA	25	3.8608472E-5	45.0	4
CGCAGGA	20	6.997106E-4	45.0	4
AATTATC	20	6.997106E-4	45.0	45
CTACAGG	20	6.997106E-4	45.0	3
ATGCGGG	25	3.8608472E-5	45.0	3
TTACGGG	20	6.997106E-4	45.0	3
GGCATAT	20	6.997106E-4	45.0	8
TAGGATG	25	3.8608472E-5	45.0	6
GGCGATC	20	6.997106E-4	45.0	8