SRR2936163.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936163.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	184468
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	778	0.4217533664375393	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	501	0.2715918208036082	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCG	199	0.10787778910163279	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	196	0.10625149077346749	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTAG	20	7.017877E-4	45.0	6
CTCACGA	20	7.017877E-4	45.0	24
CTTCCGA	25	3.878038E-5	45.0	22
TAGGTTA	20	7.017877E-4	45.0	6
TTCCGAC	20	7.017877E-4	45.0	23
AAGCGGC	20	7.017877E-4	45.0	22
ATCACGG	20	7.017877E-4	45.0	2
ACGGGGT	55	1.8189894E-12	45.0	5
TACGAAT	25	3.878038E-5	45.0	12
CGCTAGG	20	7.017877E-4	45.0	3
GCGATTT	20	7.017877E-4	45.0	9
ACCACGG	20	7.017877E-4	45.0	30
TAAGGCG	20	7.017877E-4	45.0	5
GAACCCT	20	7.017877E-4	45.0	36
CGCCGAC	20	7.017877E-4	45.0	13
AAGGCCC	20	7.017877E-4	45.0	6
CCACGGA	20	7.017877E-4	45.0	31
GCGTAAT	20	7.017877E-4	45.0	9
AAGCTCA	20	7.017877E-4	45.0	40
CGCACTT	130	0.0	43.269234	35