SRR2936157.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936157.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	182451
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1056	0.578785536938685	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	653	0.35790431403500117	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG	312	0.17100481773188417	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGC	252	0.13811927586036798	No Hit
GAATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTC	235	0.1288017056634384	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	214	0.11729176600840774	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG	192	0.10523373398885179	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCATAC	20	7.017675E-4	45.000004	39
ATAGGCC	20	7.017675E-4	45.000004	5
AAATAGG	20	7.017675E-4	45.000004	3
ATAGGAC	20	7.017675E-4	45.000004	5
CGCATAG	20	7.017675E-4	45.000004	2
CACGCCA	20	7.017675E-4	45.000004	27
GCGCATA	20	7.017675E-4	45.000004	1
TATGCCA	20	7.017675E-4	45.000004	10
ACGGGAT	40	6.7611836E-9	45.000004	5
AAACGGC	35	1.2044256E-7	45.000004	6
AACGGCT	35	1.2044256E-7	45.000004	7
TCAATCA	20	7.017675E-4	45.000004	13
ACAGGCG	20	7.017675E-4	45.000004	33
TCCAAGG	20	7.017675E-4	45.000004	3
TCATACT	20	7.017675E-4	45.000004	40
AATAGGC	20	7.017675E-4	45.000004	4
AGTAGCG	20	7.017675E-4	45.000004	1
CGTCATA	20	7.017675E-4	45.000004	38
AATCGGA	20	7.017675E-4	45.000004	32
TAGTACG	20	7.017675E-4	45.000004	1