##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936156.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 647190 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.89161606328899 31.0 31.0 34.0 30.0 34.0 2 32.076768800506805 33.0 31.0 34.0 30.0 34.0 3 31.96594663081939 33.0 31.0 34.0 30.0 34.0 4 35.733392048702854 37.0 35.0 37.0 35.0 37.0 5 32.017762944421264 37.0 35.0 37.0 0.0 37.0 6 33.88747817487909 37.0 35.0 37.0 19.0 37.0 7 20.778990713700768 32.0 0.0 37.0 0.0 37.0 8 28.049364174353745 35.0 17.0 37.0 17.0 37.0 9 34.66436749640754 35.0 32.0 39.0 30.0 39.0 10 36.07958095767858 37.0 35.0 39.0 32.0 39.0 11 36.537274988797726 38.0 35.0 39.0 32.0 39.0 12 36.9724315888688 39.0 37.0 39.0 33.0 39.0 13 36.80604613791931 39.0 37.0 39.0 33.0 39.0 14 38.19512353404719 40.0 37.0 41.0 33.0 41.0 15 38.35252707860134 40.0 38.0 41.0 34.0 41.0 16 38.41201810905607 40.0 38.0 41.0 34.0 41.0 17 38.361152057355646 40.0 38.0 41.0 34.0 41.0 18 38.262199663159194 40.0 37.0 41.0 34.0 41.0 19 38.22914136497783 40.0 37.0 41.0 34.0 41.0 20 38.20599514825631 40.0 37.0 41.0 34.0 41.0 21 38.14843554443054 40.0 37.0 41.0 34.0 41.0 22 38.10984718552512 40.0 37.0 41.0 34.0 41.0 23 38.063982756223055 40.0 37.0 41.0 34.0 41.0 24 37.94922356649516 40.0 37.0 41.0 33.0 41.0 25 37.81528453777098 40.0 36.0 41.0 33.0 41.0 26 37.68442343052272 40.0 36.0 41.0 33.0 41.0 27 37.66043820207358 40.0 36.0 41.0 33.0 41.0 28 37.52247562539594 40.0 36.0 41.0 33.0 41.0 29 37.48022064617809 40.0 36.0 41.0 33.0 41.0 30 37.3426675319458 40.0 36.0 41.0 32.0 41.0 31 37.252531714025245 40.0 36.0 41.0 32.0 41.0 32 37.189913317572895 40.0 36.0 41.0 32.0 41.0 33 37.05680402972852 39.0 36.0 41.0 31.0 41.0 34 36.96808819666558 39.0 36.0 41.0 31.0 41.0 35 36.85808958729276 39.0 35.0 41.0 31.0 41.0 36 36.70978692501429 39.0 35.0 41.0 30.0 41.0 37 36.636511688993956 39.0 35.0 41.0 30.0 41.0 38 36.526275127860444 39.0 35.0 41.0 30.0 41.0 39 36.417285495758584 39.0 35.0 41.0 30.0 41.0 40 36.285284074228585 39.0 35.0 40.0 30.0 41.0 41 36.17640878258317 39.0 35.0 40.0 29.0 41.0 42 36.08939105981242 39.0 35.0 40.0 29.0 41.0 43 35.99424589378699 39.0 35.0 40.0 28.0 41.0 44 35.88283966068697 39.0 35.0 40.0 28.0 41.0 45 35.80210448245492 39.0 35.0 40.0 28.0 41.0 46 35.60037546933667 38.0 35.0 40.0 27.0 41.0 47 35.55575024335975 38.0 35.0 40.0 26.0 41.0 48 35.44469321219425 38.0 34.0 40.0 26.0 41.0 49 35.28656190608631 38.0 34.0 40.0 26.0 41.0 50 35.14054605293654 38.0 34.0 40.0 26.0 41.0 51 33.14674515984487 36.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 28.0 9 43.0 10 34.0 11 20.0 12 20.0 13 12.0 14 21.0 15 36.0 16 56.0 17 121.0 18 243.0 19 460.0 20 856.0 21 1358.0 22 1996.0 23 2851.0 24 4037.0 25 5430.0 26 6804.0 27 7762.0 28 8994.0 29 10632.0 30 13223.0 31 17216.0 32 22275.0 33 31526.0 34 43339.0 35 56020.0 36 75470.0 37 124044.0 38 128847.0 39 83398.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.89017135617052 20.733478576615834 24.517993170475442 12.858356896738208 2 31.991532625658614 25.66649670112332 24.721642794233535 17.620327878984533 3 31.868539377926115 24.893153478885644 26.290579273474556 16.947727869713685 4 28.31363278171789 25.65537168374048 27.097606576121386 18.933388958420245 5 22.469753858990405 37.35919899874843 22.66784097405708 17.503206168204084 6 26.551708153710656 35.83847092816638 24.214372904402108 13.395448013720854 7 48.54015049676293 43.00020086836941 5.488187394737249 2.97146124013041 8 82.33764427756918 5.790108005377092 7.921012376581839 3.9512353404718863 9 75.59325700335296 8.730048362922789 9.890758509865726 5.7859361238585265 10 38.527634852207235 30.36310820624546 17.330304856379115 13.77895208516819 11 28.45145938596085 27.103632627203755 26.316692161498167 18.128215825337225 12 27.8820748157419 23.165530987808836 29.763593380614655 19.188800815834608 13 24.577481110647568 24.68718614317279 29.80762990775506 20.927702838424576 14 19.001684204020457 28.81503113459726 29.654969947001653 22.528314714380627 15 19.471561674315115 27.41667825522644 33.28790617902007 19.82385389143837 16 21.990451026746396 25.63482130440829 32.08594075928244 20.28878690956288 17 21.89465226594972 25.59928305443533 29.12158716914662 23.384477510468333 18 22.12889568751062 27.457160957369553 28.88332638019747 21.530616974922356 19 24.391137069485005 27.309599962916607 27.165592793460963 21.133670174137425 20 25.94663081938843 25.670050526120612 28.344535607781328 20.03878304670962 21 25.30601523509325 26.111806424697537 28.01418439716312 20.56799394304609 22 23.527248566881443 26.040420896490986 27.876975849441433 22.555354687186142 23 23.261638776866146 26.70745839707041 28.60906379888441 21.421839027179036 24 22.161652683137874 25.374928537214732 29.38426119068589 23.07915758896151 25 22.072807058205473 27.86585083205859 27.36955144547969 22.691790664256246 26 21.11667361980253 28.698527480338075 27.648912993093216 22.535885906766172 27 22.35185957755837 28.525162626122157 27.6388695746226 21.484108221696875 28 20.872541293901328 28.542468208717686 28.936170212765955 21.648820284615027 29 21.998331247392574 26.76540119593937 28.939569523632937 22.29669803303512 30 21.52165515536396 27.610129946383598 28.417157249030424 22.451057649222022 31 22.31199493193653 28.121417203603272 26.87819651107094 22.688391353389267 32 22.875816993464053 28.380382886014928 26.885458675195846 21.858341445325173 33 22.114989415782073 29.40759282436379 26.809592237210094 21.667825522644048 34 21.813686861663502 28.19898329702251 27.56485730620065 22.422472535113336 35 21.665816838949922 26.813918632858975 27.222917535808648 24.297346992382455 36 21.559665631421993 29.005083514887435 26.480322625504105 22.954928228186468 37 21.6180719726819 29.219703641898054 27.517112439932635 21.645111945487415 38 21.254036681654537 28.290610176300625 27.071648202228094 23.383704939816745 39 22.584712371946413 26.781934207883314 27.65339390287242 22.979959517297857 40 22.402540212302416 27.1057958250282 28.37451134906287 22.117152613606514 41 19.813192416446483 27.81161637231725 28.880699639982076 23.49449157125419 42 21.46046755975834 28.18955793507316 27.14952332390797 23.200451181260526 43 22.112517189696998 27.457006443239234 27.073811400052534 23.356664967011234 44 21.63321435745299 27.883465442914755 26.679027797092044 23.804292402540213 45 21.23225018927981 27.232960954279267 26.817472457856272 24.71731639858465 46 20.75464701246929 29.629938657890264 26.685362876435047 22.930051453205397 47 21.816777144269846 27.567947588806994 27.982818028708728 22.632457238214435 48 21.11837327523602 26.154915867056044 28.230040637216273 24.496670220491666 49 19.771473601260837 27.59715075943695 28.650319071679103 23.98105656762311 50 19.49813810472968 26.847911741528762 29.135338926744854 24.518611226996708 51 19.686027287195415 27.20962932060137 27.351782320493207 25.752561071710005 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 277.0 1 850.0 2 1423.0 3 3211.5 4 5000.0 5 3631.0 6 2262.0 7 1959.0 8 1656.0 9 1671.5 10 1687.0 11 1667.5 12 1648.0 13 1645.5 14 1643.0 15 1650.5 16 1658.0 17 1691.0 18 1724.0 19 1883.0 20 2042.0 21 2305.0 22 2568.0 23 2839.5 24 3111.0 25 4199.0 26 6706.0 27 8125.0 28 9697.5 29 11270.0 30 12907.5 31 14545.0 32 17186.5 33 19828.0 34 21784.0 35 23740.0 36 24953.0 37 26166.0 38 28075.5 39 29985.0 40 32768.5 41 35552.0 42 38387.0 43 41222.0 44 43652.5 45 46083.0 46 49588.0 47 53093.0 48 51353.5 49 49614.0 50 46556.5 51 43499.0 52 39645.0 53 35791.0 54 34132.5 55 32474.0 56 31079.5 57 29685.0 58 29171.5 59 28658.0 60 28098.0 61 27538.0 62 24654.5 63 21771.0 64 17596.0 65 13421.0 66 10871.0 67 8321.0 68 6969.5 69 5618.0 70 4600.5 71 3583.0 72 3007.0 73 2431.0 74 1966.5 75 1144.5 76 787.0 77 604.0 78 421.0 79 332.5 80 244.0 81 177.0 82 110.0 83 83.0 84 56.0 85 43.5 86 31.0 87 25.5 88 20.0 89 14.5 90 9.0 91 5.5 92 2.0 93 3.5 94 5.0 95 3.0 96 1.0 97 1.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 647190.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.43286803191959 #Duplication Level Percentage of deduplicated Percentage of total 1 76.02412867712893 29.21825304689769 2 6.963420679256272 5.352484560331923 3 2.9499427689710167 3.4012428342473555 4 1.89377535858895 2.9113287375500128 5 1.4530095092346949 2.7921661358770633 6 1.2144024990337452 2.800378258979837 7 1.028747503935499 2.7676401939843798 8 0.9264455211427288 2.848476676227317 9 0.848229747421304 2.933991174905231 >10 6.625985131942187 41.09693454047167 >50 0.04449592332161746 1.1587263338820941 >100 0.024719957397886082 1.9123821170535078 >500 0.00224726885435328 0.5591528238553161 >1k 4.49453770870656E-4 0.2468425657365606 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1429 0.22080069222330384 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 857 0.1324186096818554 No Hit GAATCTGTCTCTTATACACATCTGACGCCACTAACCTCGTATGCCGTCTTC 735 0.11356788578315487 RNA PCR Primer, Index 29 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.545141303172175E-4 0.0 0.0 0.05531605865356387 0.0 2 1.545141303172175E-4 0.0 0.0 0.2646827052333936 0.0 3 1.545141303172175E-4 0.0 0.0 0.3493564486472288 0.0 4 1.545141303172175E-4 0.0 0.0 0.5168497659110926 0.0 5 1.545141303172175E-4 0.0 0.0 0.919977131908713 0.0 6 1.545141303172175E-4 0.0 0.0 1.1953213121339947 0.0 7 1.545141303172175E-4 0.0 0.0 1.4173581173998362 0.0 8 1.545141303172175E-4 0.0 0.0 1.9334353126593427 0.0 9 1.545141303172175E-4 0.0 0.0 2.097683833186545 0.0 10 1.545141303172175E-4 0.0 0.0 2.691790664256246 0.0 11 1.545141303172175E-4 0.0 0.0 3.229345323629846 0.0 12 1.545141303172175E-4 0.0 0.0 3.7923948145057866 0.0 13 1.545141303172175E-4 0.0 0.0 4.075310187116612 0.0 14 1.545141303172175E-4 0.0 0.0 4.197376350067214 0.0 15 3.09028260634435E-4 0.0 0.0 4.377539826017089 0.0 16 3.09028260634435E-4 0.0 0.0 4.727205302924952 0.0 17 3.09028260634435E-4 0.0 0.0 5.109318747199431 0.0 18 0.0038628532579304377 0.0 0.0 5.552774301209846 1.545141303172175E-4 19 0.0038628532579304377 0.0 0.0 5.807259073842303 1.545141303172175E-4 20 0.0038628532579304377 0.0 0.0 6.0690060105996695 1.545141303172175E-4 21 0.0038628532579304377 0.0 0.0 6.396266938611536 1.545141303172175E-4 22 0.0038628532579304377 0.0 0.0 6.788269287226317 1.545141303172175E-4 23 0.0038628532579304377 0.0 0.0 7.163275081506204 1.545141303172175E-4 24 0.0038628532579304377 0.0 0.0 7.464423121494461 1.545141303172175E-4 25 0.0038628532579304377 0.0 0.0 7.739458273459108 1.545141303172175E-4 26 0.0038628532579304377 0.0 0.0 7.99255241891871 1.545141303172175E-4 27 0.0038628532579304377 0.0 0.0 8.24240176764165 1.545141303172175E-4 28 0.0038628532579304377 0.0 0.0 8.515737264172808 1.545141303172175E-4 29 0.0038628532579304377 0.0 0.0 8.786909562879526 1.545141303172175E-4 30 0.0038628532579304377 0.0 0.0 9.090838857213493 1.545141303172175E-4 31 0.0038628532579304377 0.0 0.0 9.39971260371761 1.545141303172175E-4 32 0.0038628532579304377 0.0 0.0 9.681855405676849 1.545141303172175E-4 33 0.0038628532579304377 0.0 0.0 9.97064231523973 1.545141303172175E-4 34 0.0038628532579304377 0.0 0.0 10.246450037855961 1.545141303172175E-4 35 0.0038628532579304377 0.0 0.0 10.55424218544786 1.545141303172175E-4 36 0.0038628532579304377 0.0 0.0 10.86079821999722 1.545141303172175E-4 37 0.0038628532579304377 0.0 0.0 11.154220553469615 1.545141303172175E-4 38 0.0038628532579304377 0.0 0.0 11.450887683678673 1.545141303172175E-4 39 0.0038628532579304377 0.0 0.0 11.744464531281386 1.545141303172175E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTCGTC 100 0.0 45.000004 16 GCGTAAA 25 3.888909E-5 45.000004 1 ACGCGAA 20 7.030999E-4 45.0 1 GGCGTAA 20 7.030999E-4 45.0 1 GTCGTAA 20 7.030999E-4 45.0 1 CGTAAAG 30 2.1640262E-6 44.999996 2 CGTTTTA 380 0.0 42.039474 1 CGTTAAG 60 3.6379788E-12 41.249996 2 GTAACGG 55 6.002665E-11 40.909092 2 TCGTTGA 40 3.4550976E-7 39.375 24 GTAAGGT 80 0.0 39.375 4 CTTTCGT 115 0.0 39.130432 15 ACTTTCG 115 0.0 39.130432 14 TTACACG 75 0.0 39.0 34 ATTCCGC 35 6.2440595E-6 38.571426 42 TAGTGCG 35 6.2440595E-6 38.571426 1 TCGGGTA 95 0.0 37.894737 27 GATGCGC 30 1.139371E-4 37.499996 11 CGTTATT 165 0.0 36.81818 1 AGGCGAT 260 0.0 36.346153 7 >>END_MODULE