##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936152.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 595804 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.97974501681761 33.0 31.0 34.0 30.0 34.0 2 32.164624608092595 33.0 31.0 34.0 30.0 34.0 3 31.94200273915583 33.0 31.0 34.0 30.0 34.0 4 35.750347429691644 37.0 35.0 37.0 35.0 37.0 5 32.10858940188384 37.0 35.0 37.0 0.0 37.0 6 33.97975005203053 37.0 35.0 37.0 19.0 37.0 7 20.71669206651852 32.0 0.0 37.0 0.0 37.0 8 28.080330108559192 35.0 17.0 37.0 17.0 37.0 9 34.812871346953024 37.0 32.0 39.0 32.0 39.0 10 36.20490463306725 37.0 35.0 39.0 32.0 39.0 11 36.68169733670805 38.0 35.0 39.0 33.0 39.0 12 37.07714281877933 39.0 37.0 39.0 34.0 39.0 13 36.92767420158307 39.0 37.0 39.0 33.0 39.0 14 38.322928345563305 40.0 38.0 41.0 34.0 41.0 15 38.485127659431626 40.0 38.0 41.0 34.0 41.0 16 38.537836268302996 40.0 38.0 41.0 34.0 41.0 17 38.4856177534894 40.0 38.0 41.0 34.0 41.0 18 38.374623198232975 40.0 38.0 41.0 34.0 41.0 19 38.31764808561205 40.0 37.0 41.0 34.0 41.0 20 38.267242247450504 40.0 37.0 41.0 34.0 41.0 21 38.188817127780275 40.0 37.0 41.0 34.0 41.0 22 38.15668407731402 40.0 37.0 41.0 34.0 41.0 23 38.09781068942135 40.0 37.0 41.0 34.0 41.0 24 37.98094675430175 40.0 36.0 41.0 33.0 41.0 25 37.82603675034072 40.0 36.0 41.0 33.0 41.0 26 37.680453639116216 40.0 36.0 41.0 33.0 41.0 27 37.656794851998306 40.0 36.0 41.0 33.0 41.0 28 37.52338856402441 40.0 36.0 41.0 33.0 41.0 29 37.47679606044941 40.0 36.0 41.0 33.0 41.0 30 37.327985377741676 40.0 36.0 41.0 33.0 41.0 31 37.202712637041714 40.0 35.0 41.0 32.0 41.0 32 37.07800719699767 39.0 35.0 41.0 31.0 41.0 33 36.90311411135205 39.0 35.0 41.0 31.0 41.0 34 36.698244724775265 39.0 35.0 41.0 30.0 41.0 35 36.52533047780814 39.0 35.0 41.0 30.0 41.0 36 36.36146954367544 39.0 35.0 41.0 30.0 41.0 37 36.28862847513612 39.0 35.0 41.0 30.0 41.0 38 36.15782203543447 39.0 35.0 41.0 29.0 41.0 39 36.09246497170211 39.0 35.0 41.0 29.0 41.0 40 35.98017804512894 39.0 35.0 41.0 28.0 41.0 41 35.82187430765822 39.0 35.0 40.0 27.0 41.0 42 35.71659304066438 39.0 35.0 40.0 27.0 41.0 43 35.62258729380803 39.0 35.0 40.0 26.0 41.0 44 35.49825445952025 38.0 35.0 40.0 26.0 41.0 45 35.41090526414727 38.0 35.0 40.0 26.0 41.0 46 35.2687041376023 38.0 34.0 40.0 25.0 41.0 47 35.22164168082121 38.0 34.0 40.0 25.0 41.0 48 35.11030808789468 38.0 34.0 40.0 24.0 41.0 49 34.978638948379 38.0 34.0 40.0 24.0 41.0 50 34.830471094521016 38.0 34.0 40.0 24.0 41.0 51 32.93767245604259 36.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 10.0 9 29.0 10 27.0 11 21.0 12 23.0 13 10.0 14 27.0 15 35.0 16 69.0 17 119.0 18 198.0 19 424.0 20 747.0 21 1270.0 22 1953.0 23 3138.0 24 4546.0 25 6239.0 26 7516.0 27 8217.0 28 8710.0 29 10098.0 30 11654.0 31 14840.0 32 19946.0 33 28840.0 34 39890.0 35 52083.0 36 68040.0 37 113439.0 38 116549.0 39 77074.0 40 19.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.455586065216075 20.38170270760183 24.96542487126639 14.197286355915702 2 34.37472725930004 23.974494968143887 25.5985189760391 16.052258796516973 3 31.16561822344261 23.468120388584165 29.46287705352767 15.903384334445555 4 26.927983027975642 25.246389752334657 29.743170572872955 18.082456646816738 5 22.232982658726698 36.71929023638646 24.590637189411282 16.45708991547556 6 25.84155191975885 33.63505448100382 27.249733133715115 13.27366046552222 7 47.548858349390066 43.20934401246047 6.694147739860759 2.5476498982886993 8 82.64613866305027 4.74854146665682 9.757235600969446 2.848084269323469 9 76.71096535102147 7.098139656665616 11.428254929473452 4.762640062839457 10 39.59506817678297 25.65709528636934 19.966465481937014 14.781371054910675 11 28.312163060335276 27.05990560654175 27.094984256567596 17.532947076555377 12 25.942424018637 23.664829373418105 31.318520855851922 19.07422575209297 13 23.33351236312613 24.144349484058516 32.786117582292164 19.73602057052319 14 19.889762405086238 26.086095427355303 33.29920577908172 20.72493638847675 15 20.177440903384333 25.90852025162637 34.61138226665145 19.302656578337842 16 23.365905566260047 24.912890816442992 32.2637981618116 19.45740545548536 17 23.456371558431968 24.649213499741528 30.620472504380636 21.27394243744587 18 24.221556082201527 24.930346221240544 31.148498499506548 19.69959919705138 19 24.075702747883533 26.546313888459967 29.453981510698153 19.924001852958355 20 24.499331995085633 25.618995508590075 30.513558149995635 19.368114346328657 21 24.618163020053572 25.64433941363267 30.92610992876852 18.81138763754523 22 24.221556082201527 23.936395190364617 30.99458882451276 20.847459902921095 23 22.815892474706448 25.026350947627073 30.711442017844792 21.446314559821687 24 22.126571825633935 24.412894173251605 32.38531463367148 21.075219367442983 25 21.69018670569516 26.88686212244295 30.472269404032197 20.95068176782969 26 20.917281522111296 27.349766030439543 30.752562923377486 20.980389524071676 27 21.380185430107886 26.58659559183893 31.38548918771945 20.64772979033373 28 20.517485616075085 26.544299803291015 31.746178273391923 21.192036307241978 29 20.896804989560323 25.82241811065384 32.313814610173814 20.96696228961202 30 21.211337956777733 25.650381669139517 32.13607159401414 21.002208780068614 31 23.113977079710775 26.206604856630705 30.161261085860453 20.518156977798068 32 22.90367301998644 26.279615444005078 30.391705997274272 20.425005538734215 33 22.905351424293897 26.049674053883493 29.855287980611074 21.18968654121154 34 21.63580640613356 25.91003081550308 31.277567790749977 21.176594987613377 35 21.51798242375009 25.975992104786137 31.177702734456297 21.328322737007472 36 23.138985303891886 26.702069808191958 29.355962699142673 20.802982188773488 37 22.048693865767937 27.430329437197464 30.127860840142063 20.393115856892535 38 21.446146719390942 27.709112392666047 30.000973474498327 20.843767413444688 39 21.974172714516854 26.93906049640486 29.82944055427624 21.257326234802047 40 23.19118367785379 26.187806728387187 29.618129451967423 21.002880141791596 41 20.964444683150834 26.370920638330723 30.685594591509957 21.97904008700848 42 21.26403985203188 26.293210518895478 29.96035609025787 22.482393538814776 43 21.195225275426147 26.12520224771905 30.321884378084068 22.357688098770737 44 21.526374445287377 26.325435881598647 29.939879557706895 22.20831011540708 45 21.329833300884182 26.561923048519308 29.290504931151855 22.817738719444648 46 21.531241817779 27.410692106800223 28.945928526830972 22.112137548589807 47 20.412921027720525 26.993776476827954 30.775053541097407 21.818248954354118 48 20.861054977811495 26.399117830696 30.990392813744116 21.749434377748386 49 21.29341192741237 26.038260904592786 30.63087861108687 22.037448556907975 50 20.48123208303402 26.43016831038395 30.99677075011245 22.09182885646958 51 21.038965834401917 26.370081436176996 29.620647058428613 22.970305670992474 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 502.0 1 1037.5 2 1573.0 3 5872.5 4 10172.0 5 6829.5 6 3487.0 7 3041.5 8 2596.0 9 2528.5 10 2461.0 11 2449.0 12 2437.0 13 2336.5 14 2236.0 15 2264.5 16 2293.0 17 2267.0 18 2241.0 19 2501.5 20 2762.0 21 3095.0 22 3428.0 23 3781.0 24 4134.0 25 4905.0 26 6903.0 27 8130.0 28 9799.0 29 11468.0 30 13399.0 31 15330.0 32 17003.5 33 18677.0 34 20600.5 35 22524.0 36 24005.0 37 25486.0 38 27008.5 39 28531.0 40 30055.5 41 31580.0 42 33756.5 43 35933.0 44 37122.0 45 38311.0 46 39601.0 47 40891.0 48 41044.5 49 41198.0 50 39633.5 51 38069.0 52 35963.5 53 33858.0 54 32076.0 55 30294.0 56 29280.5 57 28267.0 58 26857.0 59 25447.0 60 23270.5 61 21094.0 62 19274.5 63 17455.0 64 15145.0 65 12835.0 66 10789.5 67 8744.0 68 7323.0 69 5902.0 70 5037.0 71 4172.0 72 3346.0 73 2520.0 74 1970.0 75 1111.5 76 803.0 77 617.5 78 432.0 79 318.0 80 204.0 81 151.0 82 98.0 83 73.0 84 48.0 85 36.5 86 25.0 87 25.0 88 25.0 89 22.0 90 19.0 91 14.0 92 9.0 93 7.0 94 5.0 95 3.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 595804.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.69228008982821 #Duplication Level Percentage of deduplicated Percentage of total 1 73.10748932434556 27.555879642773583 2 7.426898906097044 5.59873507534897 3 3.5636045780261485 4.02961145653067 4 2.398254856421851 3.615827751001725 5 1.7755966285549498 3.346314272502391 6 1.4815259732577988 3.3505255166632963 7 1.2421486461972953 3.277359027996856 8 1.1093320210055915 3.345060259868635 9 1.0037105633354995 3.4048925714124807 >10 6.853657387256021 40.04248371642241 >50 0.025671783610690665 0.6320619505054027 >100 0.010656212064559141 0.6205599565934831 >500 4.843732756617792E-4 0.14660477938939892 >1k 9.687465513235584E-4 1.034084022990729 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3517 0.5902947949325617 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2147 0.3603534048109781 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 803 0.13477586588878224 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.3568086149136293E-4 0.0 0.0 0.023497660304395405 0.0 2 3.3568086149136293E-4 0.0 0.0 0.12034158884465361 0.0 3 3.3568086149136293E-4 0.0 0.0 0.17237212237581487 0.0 4 3.3568086149136293E-4 0.0 0.0 0.22675242193741565 0.0 5 3.3568086149136293E-4 0.0 0.0 0.4135588213573591 0.0 6 3.3568086149136293E-4 0.0 0.0 0.5634403260132527 0.0 7 3.3568086149136293E-4 0.0 0.0 0.6943558619948842 0.0 8 3.3568086149136293E-4 0.0 0.0 0.9852233284771502 0.0 9 3.3568086149136293E-4 0.0 0.0 1.1032151512913644 0.0 10 3.3568086149136293E-4 0.0 0.0 1.4504770025041793 0.0 11 3.3568086149136293E-4 0.0 0.0 1.8771273774597015 0.0 12 3.3568086149136293E-4 0.0 0.0 2.254096984914502 0.0 13 3.3568086149136293E-4 0.0 0.0 2.4367073735658034 0.0 14 3.3568086149136293E-4 0.0 0.0 2.52079542936939 0.0 15 3.3568086149136293E-4 0.0 0.0 2.6468435928593967 0.0 16 3.3568086149136293E-4 0.0 0.0 2.8949117495015138 0.0 17 3.3568086149136293E-4 0.0 0.0 3.1827580882303574 0.0 18 3.3568086149136293E-4 0.0 0.0 3.5259917691052762 0.0 19 3.3568086149136293E-4 0.0 0.0 3.719511785755047 0.0 20 3.3568086149136293E-4 0.0 0.0 3.9115212385281066 0.0 21 3.3568086149136293E-4 0.0 0.0 4.154386341817108 0.0 22 3.3568086149136293E-4 0.0 0.0 4.42712704177884 0.0 23 5.035212922370444E-4 0.0 0.0 4.682580177373767 0.0 24 5.035212922370444E-4 0.0 0.0 4.9002692160509165 0.0 25 5.035212922370444E-4 0.0 0.0 5.098992286053803 0.0 26 5.035212922370444E-4 0.0 0.0 5.282106195997342 0.0 27 5.035212922370444E-4 0.0 0.0 5.46135977603373 0.0 28 5.035212922370444E-4 0.0 0.0 5.65874012259065 0.0 29 5.035212922370444E-4 0.0 0.0 5.877604044283019 0.0 30 5.035212922370444E-4 0.0 0.0 6.120804828433512 0.0 31 5.035212922370444E-4 0.0 0.0 6.355781431477466 0.0 32 5.035212922370444E-4 0.0 0.0 6.569945821108956 0.0 33 5.035212922370444E-4 0.0 0.0 6.793509274862203 0.0 34 5.035212922370444E-4 0.0 0.0 7.031674846090325 0.0 35 5.035212922370444E-4 0.0 0.0 7.2755469919638 0.0 36 5.035212922370444E-4 0.0 0.0 7.506663265100603 0.0 37 5.035212922370444E-4 0.0 0.0 7.75590630475794 0.0 38 5.035212922370444E-4 0.0 0.0 8.010688078629885 0.0 39 6.713617229827259E-4 0.0 0.0 8.286617746775786 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGATA 20 7.030547E-4 45.000004 9 TACGAAT 50 2.1827873E-11 45.0 12 CGTTTTA 725 0.0 41.27586 1 CGTTATT 330 0.0 40.90909 1 CATAGTT 105 0.0 40.714287 36 GTTAGCG 50 1.0804797E-9 40.5 1 TCTACGG 50 1.0804797E-9 40.5 2 CGTTTTT 1225 0.0 40.224487 1 CGTTAGG 45 1.9255822E-8 40.000004 3 TCACGAC 40 3.4544792E-7 39.375004 25 ATAGGCG 70 0.0 38.57143 5 CGTTAAG 35 6.2432227E-6 38.57143 2 GTTAACG 35 6.2432227E-6 38.57143 1 GCTAACG 35 6.2432227E-6 38.57143 1 TGCACGG 35 6.2432227E-6 38.57143 2 CGGTTTA 65 9.094947E-12 38.076927 1 GCTACGA 65 9.094947E-12 38.076927 10 AGGCGAT 350 0.0 37.928574 7 TAGGCAT 85 0.0 37.058823 6 ATAGGCC 55 2.744855E-9 36.81818 5 >>END_MODULE