SRR2936151.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936151.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	465897
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4122	0.884744911428921	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2401	0.5153499593257737	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTC	1011	0.21700075338540492	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	931	0.19982957606509594	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCG	877	0.18823903137388737	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGC	655	0.1405890143100299	No Hit
GAATCTATCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTC	615	0.13200342564987538	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCG	577	0.12384711642272864	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	501	0.10753449796843507	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGTT	20	7.028964E-4	45.0	27
TGCGATG	25	3.8872222E-5	45.0	1
TGTTACG	25	3.8872222E-5	45.0	1
ACGTATA	20	7.028964E-4	45.0	38
TAGTGCG	20	7.028964E-4	45.0	1
TCGACGG	20	7.028964E-4	45.0	2
TCAACGG	25	3.8872222E-5	45.0	2
TATAGCG	30	2.162711E-6	44.999996	1
CGTTATT	320	0.0	44.296875	1
AGGCGAT	285	0.0	43.421055	7
CGTTTTA	940	0.0	43.085106	1
CGTTTTT	1855	0.0	42.331535	1
AGGTACC	70	0.0	41.785713	7
CGGTTTA	70	0.0	41.785713	1
GTTACGG	45	1.924127E-8	40.0	2
CTTACGG	45	1.924127E-8	40.0	2
GCGATAT	40	3.4523146E-7	39.375	9
TAAGGAT	175	0.0	38.57143	5
ACAACGG	35	6.240294E-6	38.571426	2
CGGGTAT	35	6.240294E-6	38.571426	6