SRR2936150.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936150.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	333734
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2380	0.7131428023515735	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1293	0.38743430396663214	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCG	755	0.22622807385522603	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTC	700	0.2097478830445804	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGC	593	0.1776864209220517	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCG	517	0.15491379362006868	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	478	0.14322784013615636	No Hit
GAATCTATCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTC	476	0.14262856047031466	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGC	392	0.11745881450496504	No Hit
GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	375	0.11236493734531093	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTAG	20	7.026085E-4	45.0	40
GGTACGT	20	7.026085E-4	45.0	8
ATAGCGG	40	6.7902874E-9	45.0	2
CCCGTGA	20	7.026085E-4	45.0	21
CTCGGTT	20	7.026085E-4	45.0	36
TCTCGAT	20	7.026085E-4	45.0	23
TTGCGTG	20	7.026085E-4	45.0	1
CTCGATA	20	7.026085E-4	45.0	24
AATAGCG	25	3.884836E-5	45.0	1
ATACGAG	20	7.026085E-4	45.0	1
ATTGCGA	20	7.026085E-4	45.0	1
TCAAGCG	25	3.884836E-5	45.0	17
CGTTTAG	25	3.884836E-5	45.0	2
CGTCAGC	20	7.026085E-4	45.0	29
CTTACGG	20	7.026085E-4	45.0	2
AACACGT	25	3.884836E-5	45.0	41
CCCGACC	20	7.026085E-4	45.0	10
GGTACCT	30	2.1608557E-6	44.999996	8
CTACGGG	30	2.1608557E-6	44.999996	3
CGTTTTA	440	0.0	42.954544	1