##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936146.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 346010 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.93934279356088 31.0 31.0 34.0 30.0 34.0 2 32.12583740354325 33.0 31.0 34.0 30.0 34.0 3 31.775110545937977 33.0 31.0 34.0 30.0 34.0 4 35.65864570388139 37.0 35.0 37.0 35.0 37.0 5 31.99702320742175 37.0 35.0 37.0 0.0 37.0 6 33.911097945146096 37.0 35.0 37.0 19.0 37.0 7 20.838140516170053 32.0 0.0 37.0 0.0 37.0 8 28.141027715961968 35.0 17.0 37.0 17.0 37.0 9 34.82873038351493 37.0 32.0 39.0 32.0 39.0 10 36.26658478078668 37.0 35.0 39.0 32.0 39.0 11 36.70225138001792 38.0 35.0 39.0 33.0 39.0 12 37.096245773243545 39.0 37.0 39.0 34.0 39.0 13 36.95447530418196 39.0 37.0 39.0 33.0 39.0 14 38.41691858616803 40.0 38.0 41.0 34.0 41.0 15 38.57989942487211 40.0 38.0 41.0 34.0 41.0 16 38.635418051501404 40.0 38.0 41.0 35.0 41.0 17 38.57767116557325 40.0 38.0 41.0 34.0 41.0 18 38.44482818415653 40.0 38.0 41.0 34.0 41.0 19 38.37612785757637 40.0 37.0 41.0 34.0 41.0 20 38.28678361897055 40.0 37.0 41.0 34.0 41.0 21 38.212696164850726 40.0 37.0 41.0 34.0 41.0 22 38.14186006184792 40.0 37.0 41.0 34.0 41.0 23 38.08289355798966 40.0 37.0 41.0 34.0 41.0 24 37.93905089448282 40.0 36.0 41.0 33.0 41.0 25 37.79575156787376 40.0 36.0 41.0 33.0 41.0 26 37.66479870523973 40.0 36.0 41.0 33.0 41.0 27 37.62449351174821 40.0 36.0 41.0 33.0 41.0 28 37.51106904424728 40.0 36.0 41.0 33.0 41.0 29 37.47358746857027 40.0 36.0 41.0 33.0 41.0 30 37.340391896187974 40.0 36.0 41.0 33.0 41.0 31 37.19186150689286 40.0 35.0 41.0 32.0 41.0 32 37.02371029739025 40.0 35.0 41.0 31.0 41.0 33 36.79867344874425 39.0 35.0 41.0 31.0 41.0 34 36.59819658391376 39.0 35.0 41.0 30.0 41.0 35 36.387578393688045 39.0 35.0 41.0 30.0 41.0 36 36.19700586688246 39.0 35.0 41.0 29.0 41.0 37 36.09164475015173 39.0 35.0 41.0 28.0 41.0 38 35.96766856449236 39.0 35.0 41.0 27.0 41.0 39 35.90155775844629 39.0 35.0 41.0 27.0 41.0 40 35.816973497875786 39.0 35.0 41.0 26.0 41.0 41 35.7064940319644 39.0 35.0 40.0 26.0 41.0 42 35.59916765411404 39.0 35.0 40.0 25.0 41.0 43 35.5159706366868 39.0 35.0 40.0 25.0 41.0 44 35.391610069073145 39.0 35.0 40.0 24.0 41.0 45 35.35823820120806 39.0 35.0 40.0 24.0 41.0 46 35.2296552122771 39.0 35.0 40.0 24.0 41.0 47 35.22467847750065 38.0 34.0 40.0 24.0 41.0 48 35.09237305280194 38.0 34.0 40.0 23.0 41.0 49 34.948250050576576 38.0 34.0 40.0 23.0 41.0 50 34.81025692899049 38.0 34.0 40.0 23.0 41.0 51 33.0468165659952 36.0 31.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 17.0 10 24.0 11 20.0 12 9.0 13 11.0 14 10.0 15 14.0 16 26.0 17 51.0 18 117.0 19 261.0 20 437.0 21 807.0 22 1337.0 23 2088.0 24 3276.0 25 4489.0 26 5227.0 27 5270.0 28 5336.0 29 5509.0 30 6403.0 31 8068.0 32 10718.0 33 15663.0 34 21916.0 35 28655.0 36 37668.0 37 65256.0 38 70388.0 39 46924.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.86130458657264 19.85144938007572 24.68454668940204 16.6026993439496 2 35.064593508858124 24.30363284298142 24.800439293662034 15.831334354498425 3 31.260368197450937 23.994104216641137 29.720239299442213 15.02528828646571 4 27.47348342533453 24.904193520418485 29.974567209040202 17.647755845206785 5 22.50946504436288 36.268315944625876 25.605618334730213 15.616600676281031 6 24.516054449293375 35.598393110025725 27.123782549637294 12.761769891043611 7 46.9642495881622 42.97621456027282 7.662784312592122 2.396751538972862 8 81.77335915146962 4.997254414612295 10.733215803011474 2.496170630906621 9 75.45157654403052 8.14571833184012 12.443860004046126 3.9588451200832346 10 38.1205745498685 30.91760353747002 19.35059680356059 11.611225109100893 11 28.08993959712147 27.124649576601833 29.108118262477962 15.677292563798733 12 27.152683448455246 23.99872836045201 31.399092511777116 17.44949567931563 13 22.51033207132742 25.74781075691454 32.17363660009826 19.56822057165978 14 19.024883673882258 29.223143839773417 31.59793069564463 20.15404179069969 15 19.286725817172915 26.831594462587788 36.05155920349123 17.83012051674807 16 22.53923297014537 25.552440680905175 34.44351319326031 17.46481315568914 17 21.45891737233028 25.377301234068376 32.240975694344094 20.922805699257246 18 22.48403225340308 26.76801248518829 31.324528192826794 19.423427068581834 19 24.081673940059538 26.954134273575907 29.888153521574523 19.076038264790036 20 25.662553105401575 26.059073437183894 31.084650732637787 17.19372272477674 21 24.40045085402156 25.994046414843503 30.916736510505476 18.68876622062946 22 23.1643594115777 25.090893326782464 30.865292910609522 20.879454351030315 23 22.73749313603653 25.99578046877258 31.695037715672957 19.571688679517933 24 21.734053929077195 25.408225195803592 32.95309384121846 19.904627033900756 25 21.863240946793443 27.1194474148146 31.32857431866131 19.68873731973064 26 21.085228750614142 29.22169879483252 30.072252247044883 19.620820207508455 27 21.553134302476806 28.34600156064854 31.464697552093867 18.636166584780785 28 20.60634085720066 28.276639403485447 32.839224299875724 18.277795439438165 29 21.121643883124765 26.87176671194474 32.37594289182393 19.63064651310656 30 21.151700817895435 26.962804543221292 32.04820669922835 19.837287939654924 31 22.495592612930263 27.787058177509323 30.186699806363976 19.53064940319644 32 23.360885523539782 28.0725990578307 30.256928990491605 18.309586428137912 33 22.291552267275513 28.726337389092798 29.94335423831681 19.038756105314874 34 21.444177913933125 28.867951793300772 30.194503049044823 19.49336724372128 35 22.828530967313082 27.20065894049305 29.487587063957687 20.48322302823618 36 21.73058582121904 29.785844339758967 29.354353920406922 19.12921591861507 37 21.987803820698822 30.343920695933647 29.30030923961735 18.367966243750182 38 22.220745065171528 28.482702812057454 28.78905233952776 20.507499783243258 39 23.067830409525737 28.18704661714979 29.17892546458195 19.566197508742523 40 22.828530967313082 27.90526285367475 30.091904858241094 19.174301320771075 41 21.048235600127164 28.15005346666281 30.416172942978527 20.385537990231494 42 21.919308690500277 28.709863876766565 29.175168347735614 20.195659084997544 43 22.47073783994682 28.41189560995347 28.94511719314471 20.172249356955003 44 21.40342764659981 28.970260975116325 28.6910782925349 20.935233085748965 45 21.13031415277015 28.450044796393172 28.73240657784457 21.68723447299211 46 20.448830958642812 30.16126701540418 28.279818502355425 21.110083523597584 47 22.276523799890178 28.192537787925204 29.543943816652696 19.98699459553192 48 21.986358775757925 27.04025895205341 30.312707725210252 20.66067454697841 49 20.561255455044652 28.215080489003206 30.126585936822636 21.097078119129506 50 19.862142712638363 28.42461200543337 30.057223779659548 21.65602150226872 51 20.37628970260975 28.385017774052773 29.508395711106616 21.730296812230858 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 194.0 1 473.5 2 753.0 3 4231.5 4 7710.0 5 5365.0 6 3020.0 7 2632.5 8 2245.0 9 2107.5 10 1970.0 11 1934.5 12 1899.0 13 1856.5 14 1814.0 15 1766.0 16 1718.0 17 1709.5 18 1701.0 19 1843.5 20 1986.0 21 2426.5 22 2867.0 23 2718.5 24 2570.0 25 3095.5 26 4434.5 27 5248.0 28 6405.5 29 7563.0 30 8358.0 31 9153.0 32 9892.5 33 10632.0 34 11561.5 35 12491.0 36 13640.5 37 14790.0 38 16096.0 39 17402.0 40 18703.0 41 20004.0 42 21114.5 43 22225.0 44 22792.0 45 23359.0 46 23819.0 47 24279.0 48 23769.0 49 23259.0 50 22002.0 51 20745.0 52 19222.0 53 17699.0 54 16541.5 55 15384.0 56 14954.0 57 14524.0 58 14435.5 59 14347.0 60 13576.0 61 12805.0 62 11057.0 63 9309.0 64 7729.5 65 6150.0 66 5009.0 67 3868.0 68 3167.0 69 2466.0 70 2046.5 71 1627.0 72 1358.0 73 1089.0 74 897.5 75 554.0 76 402.0 77 301.0 78 200.0 79 157.0 80 114.0 81 80.5 82 47.0 83 31.0 84 15.0 85 14.0 86 13.0 87 14.0 88 15.0 89 10.5 90 6.0 91 4.5 92 3.0 93 1.5 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 346010.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.52461184084664 #Duplication Level Percentage of deduplicated Percentage of total 1 69.25016823085495 27.370860192378714 2 8.645407599953433 6.8341275918813 3 4.843328234697024 5.742920054826385 4 3.3188416284812727 5.247037085078626 5 2.5265282790236365 4.993002476666576 6 1.945060012991087 4.612664521237491 7 1.6567315853023747 4.583717098348281 8 1.3242077919424327 4.18710391785194 9 1.200804592540906 4.2715201875196795 >10 5.248107049739847 29.358003747953553 >50 0.030425723152641023 0.8142244282186604 >100 0.007420908086010006 0.4335099801538833 >500 0.0014841816172020013 0.3425843415559781 >1k 0.0014841816172020013 1.2087243763289264 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2677 0.7736770613566082 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1444 0.4173289789312448 No Hit CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA 586 0.16935926707320598 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 582 0.16820323112048785 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.890089881795324E-4 0.0 0.0 0.023987746018901187 0.0 2 2.890089881795324E-4 0.0 0.0 0.08901476835929598 0.0 3 2.890089881795324E-4 0.0 0.0 0.13236611658622582 0.0 4 2.890089881795324E-4 0.0 0.0 0.18583277939943932 0.0 5 2.890089881795324E-4 0.0 0.0 0.37166555879887864 0.0 6 2.890089881795324E-4 0.0 0.0 0.5098118551486951 0.0 7 2.890089881795324E-4 0.0 0.0 0.6164561717869426 0.0 8 2.890089881795324E-4 0.0 0.0 0.8684720094794948 0.0 9 2.890089881795324E-4 0.0 0.0 0.9999710991011821 0.0 10 2.890089881795324E-4 0.0 0.0 1.272506574954481 0.0 11 2.890089881795324E-4 0.0 0.0 1.521054304788879 0.0 12 2.890089881795324E-4 0.0 0.0 1.7823184301031763 0.0 13 2.890089881795324E-4 0.0 0.0 1.9343371578856103 0.0 14 2.890089881795324E-4 0.0 0.0 2.0219068813040084 0.0 15 2.890089881795324E-4 0.0 0.0 2.1010953440652003 0.0 16 2.890089881795324E-4 0.0 0.0 2.251669026906737 0.0 17 2.890089881795324E-4 0.0 0.0 2.4340336984480215 0.0 18 2.890089881795324E-4 0.0 0.0 2.6348949452327965 0.0 19 2.890089881795324E-4 0.0 0.0 2.765527007889945 0.0 20 2.890089881795324E-4 0.0 0.0 2.896737088523453 0.0 21 2.890089881795324E-4 0.0 0.0 3.0597381578567093 0.0 22 2.890089881795324E-4 0.0 0.0 3.2449929192797895 0.0 23 2.890089881795324E-4 0.0 0.0 3.4325597526083063 0.0 24 2.890089881795324E-4 0.0 0.0 3.574174156816277 0.0 25 2.890089881795324E-4 0.0 0.0 3.712031444177914 0.0 26 2.890089881795324E-4 0.0 0.0 3.8377503540360105 0.0 27 2.890089881795324E-4 0.0 0.0 3.9779197133030837 0.0 28 5.780179763590648E-4 0.0 0.0 4.13456258489639 0.0 29 5.780179763590648E-4 0.0 0.0 4.292361492442415 0.0 30 5.780179763590648E-4 0.0 0.0 4.467500939279212 0.0 31 5.780179763590648E-4 0.0 0.0 4.637149215340597 0.0 32 5.780179763590648E-4 0.0 0.0 4.816334788011907 0.0 33 5.780179763590648E-4 0.0 0.0 5.00592468425768 0.0 34 5.780179763590648E-4 0.0 0.0 5.191179445680761 0.0 35 5.780179763590648E-4 0.0 0.0 5.378457270021098 0.0 36 5.780179763590648E-4 0.0 0.0 5.579029507817693 0.0 37 5.780179763590648E-4 0.0 0.0 5.757059044536285 0.0 38 5.780179763590648E-4 0.0 0.0 5.96398948007283 0.0 39 5.780179763590648E-4 0.0 0.0 6.177856131325684 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGG 20 7.0264435E-4 45.000004 3 TCTTCGT 20 7.0264435E-4 45.000004 41 TTCGTCG 20 7.0264435E-4 45.000004 34 TGTGCGT 20 7.0264435E-4 45.000004 9 CGTTAAG 20 7.0264435E-4 45.000004 2 CGTAGTG 20 7.0264435E-4 45.000004 2 CGCTAGG 20 7.0264435E-4 45.000004 3 GAAACGT 20 7.0264435E-4 45.000004 41 GACGGGT 35 1.2086457E-7 45.000004 4 CTATTAG 20 7.0264435E-4 45.000004 2 CCGCGAA 20 7.0264435E-4 45.000004 26 TATGCGG 25 3.885136E-5 45.0 2 TTGCGCG 25 3.885136E-5 45.0 14 TAAGGTC 25 3.885136E-5 45.0 5 CGGTCTA 25 3.885136E-5 45.0 31 CGGACAG 30 2.1610886E-6 44.999996 2 TTGAGCG 30 2.1610886E-6 44.999996 1 ATCGCGG 30 2.1610886E-6 44.999996 2 CGTTTTA 545 0.0 43.34862 1 CGGTTTT 115 0.0 43.04348 1 >>END_MODULE