SRR2936143.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936143.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	505145
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2267	0.44878203288164786	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1301	0.2575498124300943	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGTCCGT	20	7.029527E-4	45.000004	43
ATAGGCG	45	3.8380676E-10	45.000004	5
CGCATCG	20	7.029527E-4	45.000004	21
GTTACGG	40	6.8012014E-9	45.000004	2
TGTAACG	20	7.029527E-4	45.000004	1
TAACGCC	25	3.8876904E-5	45.0	12
TCGTGCG	55	1.8189894E-12	45.0	45
TCCGGTA	25	3.8876904E-5	45.0	18
CGTTTTA	505	0.0	43.217823	1
CGTTATT	190	0.0	42.63158	1
TTACGGG	140	0.0	41.785713	3
CGAATAT	105	0.0	40.714287	14
GACCGAT	200	0.0	40.5	9
ACGATAG	40	3.4530967E-7	39.375004	2
TACGAAT	110	0.0	38.863636	12
GCTACGA	105	0.0	38.57143	10
TAACGAA	35	6.2413365E-6	38.571426	1
TGAGCGT	35	6.2413365E-6	38.571426	16
CGTTTTT	870	0.0	38.275864	1
AGGCGAT	265	0.0	38.207546	7