##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936143.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 505145 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.871401280820358 31.0 31.0 34.0 30.0 34.0 2 32.061449682764355 33.0 31.0 34.0 30.0 34.0 3 31.88395609181522 33.0 31.0 34.0 30.0 34.0 4 35.69212206396183 37.0 35.0 37.0 35.0 37.0 5 32.02269447386394 37.0 35.0 37.0 0.0 37.0 6 33.90428094903444 37.0 35.0 37.0 19.0 37.0 7 20.809516079541517 32.0 0.0 37.0 0.0 37.0 8 28.101921230537766 35.0 17.0 37.0 17.0 37.0 9 34.75182373377941 37.0 32.0 39.0 31.0 39.0 10 36.14149006720842 37.0 35.0 39.0 32.0 39.0 11 36.58092626869513 38.0 35.0 39.0 32.0 39.0 12 37.01865207019767 39.0 37.0 39.0 34.0 39.0 13 36.86897425491691 39.0 37.0 39.0 33.0 39.0 14 38.265915727167446 40.0 38.0 41.0 34.0 41.0 15 38.42696057567629 40.0 38.0 41.0 34.0 41.0 16 38.47092814934326 40.0 38.0 41.0 34.0 41.0 17 38.436064892258656 40.0 38.0 41.0 34.0 41.0 18 38.3257005414287 40.0 38.0 41.0 34.0 41.0 19 38.28475982143741 40.0 37.0 41.0 34.0 41.0 20 38.26550594383791 40.0 37.0 41.0 34.0 41.0 21 38.17962367241089 40.0 37.0 41.0 34.0 41.0 22 38.14690039493611 40.0 37.0 41.0 34.0 41.0 23 38.09111641211929 40.0 37.0 41.0 34.0 41.0 24 37.96983836324224 40.0 37.0 41.0 33.0 41.0 25 37.83543537004226 40.0 36.0 41.0 33.0 41.0 26 37.7046075879203 40.0 36.0 41.0 33.0 41.0 27 37.677017490027616 40.0 36.0 41.0 33.0 41.0 28 37.58370368903978 40.0 36.0 41.0 33.0 41.0 29 37.55349454117135 40.0 36.0 41.0 33.0 41.0 30 37.422476714606695 40.0 36.0 41.0 33.0 41.0 31 37.32278454701125 40.0 36.0 41.0 32.0 41.0 32 37.20869057399361 40.0 36.0 41.0 32.0 41.0 33 37.06173474942838 39.0 36.0 41.0 31.0 41.0 34 36.92110780073048 39.0 35.0 41.0 31.0 41.0 35 36.771560641004065 39.0 35.0 41.0 30.0 41.0 36 36.61747221094933 39.0 35.0 41.0 30.0 41.0 37 36.535060230230926 39.0 35.0 41.0 30.0 41.0 38 36.406509022161956 39.0 35.0 41.0 30.0 41.0 39 36.35818428372052 39.0 35.0 41.0 30.0 41.0 40 36.28780449177959 39.0 35.0 41.0 30.0 41.0 41 36.19196666303735 39.0 35.0 40.0 29.0 41.0 42 36.11178572489087 39.0 35.0 40.0 29.0 41.0 43 36.02612913123954 39.0 35.0 40.0 28.0 41.0 44 35.89028892694177 39.0 35.0 40.0 28.0 41.0 45 35.782246681645866 39.0 35.0 40.0 27.0 41.0 46 35.66988092527888 39.0 35.0 40.0 27.0 41.0 47 35.63857506260579 39.0 35.0 40.0 27.0 41.0 48 35.505282641617754 38.0 35.0 40.0 26.0 41.0 49 35.37910105019351 38.0 34.0 40.0 26.0 41.0 50 35.20752259252294 38.0 34.0 40.0 26.0 41.0 51 33.31861940630908 36.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 24.0 10 26.0 11 11.0 12 13.0 13 16.0 14 15.0 15 27.0 16 41.0 17 62.0 18 138.0 19 282.0 20 508.0 21 893.0 22 1374.0 23 2146.0 24 3232.0 25 4579.0 26 5740.0 27 6500.0 28 7063.0 29 7957.0 30 10021.0 31 12971.0 32 17036.0 33 24351.0 34 33611.0 35 44084.0 36 58268.0 37 96584.0 38 101434.0 39 66130.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.95675499114116 20.455116847637807 24.644211068109158 13.94391709311188 2 32.96281265775173 24.55433588375615 25.852181056924252 16.63067040156787 3 30.92161656554059 23.935107741341596 29.353156024507815 15.790119668610004 4 27.920300111849073 25.904641241623693 28.199625850003464 17.975432796523773 5 22.74376664126142 37.53714280058201 23.346761820863314 16.372328737293252 6 25.347969394926213 35.57374615209494 25.520395134070416 13.557889318908432 7 47.764305298478654 43.30954478417088 5.9206762414752205 3.0054736758752436 8 82.61707034613823 5.391917172297063 8.729374733987271 3.2616377475774283 9 76.27592077522296 8.334042700610715 10.507873976778944 4.8821625473873835 10 38.193587979689 31.015253046155067 17.89149650100466 12.899662473151274 11 28.60663769808669 27.474487523384372 26.860406417959197 17.058468360569737 12 26.98947826861594 23.788615150105414 30.89786101020499 18.32404557107365 13 23.150382563422383 25.1444634708846 31.566579892902034 20.13857407279098 14 19.367706302150868 29.273574914133565 30.686238604757047 20.672480178958516 15 19.34573241346544 27.738966039454017 34.379831533520075 18.535470013560463 16 21.59815498520227 25.49347217135674 33.86908709380475 19.039285749636242 17 22.224905720139763 25.327579209929823 30.801848974056956 21.645666095873462 18 22.247671460669707 26.398756792604104 30.572607865068445 20.78096388165774 19 23.711409595264726 27.120133822961723 29.360876579991885 19.807580001781666 20 25.76507735402706 25.225034396064494 29.906858426788347 19.103029823120092 21 24.40487384810302 26.729552900652287 29.249819358797968 19.615753892446726 22 22.451771273594712 26.38133605202467 28.912688435993626 22.254204238386997 23 22.410594977679676 27.699175484266892 29.52182046739055 20.368409070662878 24 21.900642389808866 25.670649021568064 31.41889952389908 21.00980906472399 25 21.786615724198004 27.149630304170092 29.232794544140788 21.830959427491116 26 21.115917211889656 28.45222658840531 29.338308802423068 21.09354739728197 27 22.124934424769126 28.906947510120855 29.24744380326441 19.72067426184561 28 20.900137584257987 27.904067149036415 31.3470389690089 19.848756297696703 29 21.343178691266864 26.910886973047344 30.116105276702733 21.629829058983063 30 21.774342020607946 26.70500549347217 30.53440101357036 20.986251472349522 31 22.797216640766514 27.92663492660523 28.508646032327352 20.767502400300902 32 23.650437003236693 27.55228696710845 28.337408070949927 20.459867958704926 33 22.986667194567897 27.85853566797652 28.644646586623644 20.51015055083194 34 21.74722109493314 27.071236971562623 29.766700650308326 21.414841283195916 35 22.732680715438143 25.571073652119686 29.211810470261014 22.484435162181157 36 22.16947609102337 28.130734739530233 28.96099139850934 20.738797770937055 37 22.66260182719813 28.46964732898475 29.803323798117372 19.06442704569975 38 22.424848310881035 27.50675548604856 29.164497322550954 20.903898880519456 39 21.95132090785814 26.696691049104714 30.508665828623467 20.843322214413686 40 22.743370715339157 26.125963832167002 30.904789713844536 20.2258757386493 41 20.651892031000997 27.30186382127904 30.827188233081593 21.21905591463837 42 21.778499242791675 27.263459006819822 29.929030278434904 21.0290114719536 43 23.142266082016054 26.664621049401653 28.81449880727316 21.37861406130913 44 22.329430163616387 27.277712340021182 28.517950291500462 21.87490720486197 45 21.66467054014194 26.379158459452235 29.237941581130173 22.718229419275655 46 21.311306654524937 28.29346029357907 28.729572696948402 21.665660354947587 47 21.90499757495373 26.327292163636184 31.263300636450918 20.50440962495917 48 22.412970533213237 25.55741420780172 30.345346385691236 21.684268873293806 49 20.818774807233567 26.692533826920982 30.32614397846163 22.16254738738382 50 20.13778222094646 27.07103900860149 30.24596897920399 22.54520979124806 51 20.191826109334944 26.478931791861744 29.437488245949183 23.89175385285413 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 221.0 1 632.5 2 1044.0 3 3782.0 4 6520.0 5 4523.0 6 2526.0 7 2270.0 8 2014.0 9 1907.0 10 1800.0 11 1855.5 12 1911.0 13 1827.5 14 1744.0 15 1723.5 16 1703.0 17 1695.5 18 1688.0 19 1920.0 20 2152.0 21 2533.5 22 2915.0 23 3204.0 24 3493.0 25 4272.5 26 5805.5 27 6559.0 28 8259.0 29 9959.0 30 11560.0 31 13161.0 32 14348.5 33 15536.0 34 17094.5 35 18653.0 36 19881.0 37 21109.0 38 22821.0 39 24533.0 40 26895.0 41 29257.0 42 30897.5 43 32538.0 44 34523.0 45 36508.0 46 38170.0 47 39832.0 48 39249.5 49 38667.0 50 36438.5 51 34210.0 52 31157.5 53 28105.0 54 26172.5 55 24240.0 56 22890.0 57 21540.0 58 20897.5 59 20255.0 60 19310.0 61 18365.0 62 16122.0 63 13879.0 64 11133.5 65 8388.0 66 6946.5 67 5505.0 68 4567.0 69 3629.0 70 2998.5 71 2368.0 72 1945.0 73 1522.0 74 1212.0 75 702.0 76 502.0 77 400.5 78 299.0 79 217.0 80 135.0 81 108.0 82 81.0 83 68.0 84 55.0 85 44.5 86 34.0 87 26.0 88 18.0 89 12.5 90 7.0 91 5.5 92 4.0 93 3.0 94 2.0 95 2.5 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 505145.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.15384864838688 #Duplication Level Percentage of deduplicated Percentage of total 1 72.86085862829526 27.799221724954908 2 7.955474401818212 6.070639325061763 3 3.7433340931323706 4.2846780728915705 4 2.440498676558252 3.7245766852796804 5 1.8465050246722874 3.5225636619916165 6 1.4766084483439266 3.380297715062614 7 1.2433606251048586 3.3207295173930125 8 1.0408694366532605 3.1770539959040174 9 0.968235444520656 3.3247717745620227 >10 6.368363362941748 38.473956926625355 >50 0.03406741818463364 0.8741175963558309 >100 0.020759832956256018 1.3227527660465728 >500 0.0 0.0 >1k 0.0010646068182695394 0.7246402378710535 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2267 0.44878203288164786 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1301 0.2575498124300943 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04572944402102366 0.0 2 0.0 0.0 0.0 0.22132259054330936 0.0 3 0.0 0.0 0.0 0.303279256451118 0.0 4 0.0 0.0 0.0 0.38444407051440677 0.0 5 0.0 0.0 0.0 0.6760435122588564 0.0 6 0.0 0.0 0.0 0.8823209177562878 0.0 7 0.0 0.0 0.0 1.112353878589316 0.0 8 0.0 0.0 0.0 1.6715992437814884 0.0 9 0.0 0.0 0.0 1.898266834275307 0.0 10 0.0 0.0 0.0 2.531946272852349 0.0 11 0.0 0.0 0.0 3.1644379336626116 0.0 12 0.0 0.0 0.0 3.739916261667442 0.0 13 0.0 0.0 0.0 3.9871720001187776 0.0 14 0.0 0.0 0.0 4.098031258351562 0.0 15 0.0 0.0 0.0 4.282532738124697 0.0 16 0.0 0.0 0.0 4.6564847716992155 0.0 17 0.0 0.0 0.0 5.084678656623346 0.0 18 0.0 0.0 0.0 5.604331429589524 0.0 19 1.9796296112997258E-4 0.0 0.0 5.883459204782785 0.0 20 1.9796296112997258E-4 0.0 0.0 6.166150313276386 0.0 21 1.9796296112997258E-4 0.0 0.0 6.521691791465817 0.0 22 1.9796296112997258E-4 0.0 0.0 6.914054380425422 0.0 23 1.9796296112997258E-4 0.0 0.0 7.304635302734859 0.007918518445198903 24 1.9796296112997258E-4 0.0 0.0 7.621376040542814 0.007918518445198903 25 1.9796296112997258E-4 0.0 0.0 7.897138445396866 0.007918518445198903 26 1.9796296112997258E-4 0.0 0.0 8.173494739134307 0.007918518445198903 27 1.9796296112997258E-4 0.0 0.0 8.438171218165081 0.007918518445198903 28 1.9796296112997258E-4 0.0 0.0 8.717298993358343 0.007918518445198903 29 1.9796296112997258E-4 0.0 0.0 9.013451583208782 0.007918518445198903 30 1.9796296112997258E-4 0.0 0.0 9.346227320868266 0.007918518445198903 31 1.9796296112997258E-4 0.0 0.0 9.661780280909442 0.007918518445198903 32 1.9796296112997258E-4 0.0 0.0 9.972582129883499 0.007918518445198903 33 3.9592592225994516E-4 0.0 0.0 10.25626305318275 0.007918518445198903 34 3.9592592225994516E-4 0.0 0.0 10.55023805046076 0.007918518445198903 35 5.938888833899177E-4 0.0 0.0 10.881232121470074 0.007918518445198903 36 5.938888833899177E-4 0.0 0.0 11.213611933207297 0.007918518445198903 37 5.938888833899177E-4 0.0 0.0 11.535499708004632 0.007918518445198903 38 5.938888833899177E-4 0.0 0.0 11.8476872977066 0.007918518445198903 39 5.938888833899177E-4 0.0 0.0 12.170960813231844 0.007918518445198903 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCCGT 20 7.029527E-4 45.000004 43 ATAGGCG 45 3.8380676E-10 45.000004 5 CGCATCG 20 7.029527E-4 45.000004 21 GTTACGG 40 6.8012014E-9 45.000004 2 TGTAACG 20 7.029527E-4 45.000004 1 TAACGCC 25 3.8876904E-5 45.0 12 TCGTGCG 55 1.8189894E-12 45.0 45 TCCGGTA 25 3.8876904E-5 45.0 18 CGTTTTA 505 0.0 43.217823 1 CGTTATT 190 0.0 42.63158 1 TTACGGG 140 0.0 41.785713 3 CGAATAT 105 0.0 40.714287 14 GACCGAT 200 0.0 40.5 9 ACGATAG 40 3.4530967E-7 39.375004 2 TACGAAT 110 0.0 38.863636 12 GCTACGA 105 0.0 38.57143 10 TAACGAA 35 6.2413365E-6 38.571426 1 TGAGCGT 35 6.2413365E-6 38.571426 16 CGTTTTT 870 0.0 38.275864 1 AGGCGAT 265 0.0 38.207546 7 >>END_MODULE