SRR2936140.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936140.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	419252
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1638	0.3906958106341771	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1004	0.2394741110358448	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGATAT	30	2.1621909E-6	45.000004	9
ATAACGG	30	2.1621909E-6	45.000004	2
CTTACGG	30	2.1621909E-6	45.000004	2
ACGTTGA	20	7.0281554E-4	45.0	42
CGCATTC	20	7.0281554E-4	45.0	27
CACGAGG	55	1.8189894E-12	45.0	3
TACGATA	25	3.8865517E-5	45.0	33
ATTTGCG	20	7.0281554E-4	45.0	12
GCGTACG	20	7.0281554E-4	45.0	1
GCGTACA	20	7.0281554E-4	45.0	1
ATTCTCG	20	7.0281554E-4	45.0	30
AGGACCG	120	0.0	41.250004	7
CGTTTTA	390	0.0	40.961536	1
CGTTTTT	595	0.0	40.840336	1
TGTACGG	50	1.0786607E-9	40.5	2
AGACACG	85	0.0	39.705883	24
CAGACGA	40	3.4512232E-7	39.375	1
CGGGTAC	35	6.2387953E-6	38.57143	6
GCGCAAA	35	6.2387953E-6	38.57143	1
GTCCGTC	35	6.2387953E-6	38.57143	45