##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936140.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 419252 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0397445927509 33.0 31.0 34.0 30.0 34.0 2 32.233055537004 33.0 31.0 34.0 30.0 34.0 3 32.08038125041741 33.0 31.0 34.0 30.0 34.0 4 35.846309618081726 37.0 35.0 37.0 35.0 37.0 5 32.03041368914161 37.0 35.0 37.0 0.0 37.0 6 33.951861887361304 37.0 35.0 37.0 18.0 37.0 7 20.829899439954968 32.0 0.0 37.0 0.0 37.0 8 28.121838416990258 35.0 17.0 37.0 17.0 37.0 9 34.85030005819889 37.0 32.0 39.0 32.0 39.0 10 36.316339576197606 37.0 35.0 39.0 32.0 39.0 11 36.696960300726055 38.0 35.0 39.0 33.0 39.0 12 37.03555141060746 39.0 37.0 39.0 34.0 39.0 13 36.77092536231193 39.0 37.0 39.0 33.0 39.0 14 38.06798297921059 40.0 37.0 41.0 33.0 41.0 15 38.276044002175304 40.0 38.0 41.0 33.0 41.0 16 38.39504641599802 40.0 38.0 41.0 34.0 41.0 17 38.3650501369105 40.0 37.0 41.0 34.0 41.0 18 38.27468920839972 40.0 37.0 41.0 34.0 41.0 19 38.218832587560705 40.0 37.0 41.0 34.0 41.0 20 38.18388940303207 40.0 37.0 41.0 34.0 41.0 21 38.0849823018137 40.0 37.0 41.0 34.0 41.0 22 38.07210222014445 40.0 37.0 41.0 34.0 41.0 23 38.03218350777098 40.0 36.0 41.0 34.0 41.0 24 37.90488775247345 40.0 36.0 41.0 33.0 41.0 25 37.73131195557803 40.0 36.0 41.0 33.0 41.0 26 37.60373713184433 40.0 36.0 41.0 33.0 41.0 27 37.542136948660946 40.0 36.0 41.0 33.0 41.0 28 37.43574031847194 40.0 35.0 41.0 33.0 41.0 29 37.38302023603942 40.0 35.0 41.0 33.0 41.0 30 37.21424107696564 39.0 35.0 41.0 32.0 41.0 31 37.08008310037877 39.0 35.0 41.0 32.0 41.0 32 36.94719882075697 39.0 35.0 41.0 31.0 41.0 33 36.80955368131816 39.0 35.0 41.0 31.0 41.0 34 36.61688674114852 39.0 35.0 41.0 30.0 41.0 35 36.45960901796533 39.0 35.0 41.0 30.0 41.0 36 36.262808525659985 39.0 35.0 41.0 30.0 41.0 37 36.15577027658783 39.0 35.0 41.0 29.0 41.0 38 35.9733811645502 39.0 35.0 40.0 29.0 41.0 39 35.85729823590585 39.0 35.0 40.0 28.0 41.0 40 35.745365555799374 39.0 35.0 40.0 27.0 41.0 41 35.62088910726723 39.0 35.0 40.0 27.0 41.0 42 35.509163939587644 38.0 35.0 40.0 26.0 41.0 43 35.417424365298196 38.0 34.0 40.0 26.0 41.0 44 35.246691727171246 38.0 34.0 40.0 26.0 41.0 45 35.149563985383494 38.0 34.0 40.0 25.0 41.0 46 35.0457576827302 38.0 34.0 40.0 25.0 41.0 47 34.93988341140889 38.0 34.0 40.0 24.0 41.0 48 34.843857632163946 38.0 34.0 40.0 24.0 41.0 49 34.71621363762129 38.0 34.0 40.0 24.0 41.0 50 34.597394884222375 37.0 34.0 40.0 24.0 41.0 51 32.71894707717554 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 19.0 9 35.0 10 41.0 11 16.0 12 15.0 13 11.0 14 21.0 15 34.0 16 46.0 17 87.0 18 171.0 19 300.0 20 537.0 21 936.0 22 1526.0 23 2295.0 24 3212.0 25 4289.0 26 5341.0 27 5897.0 28 6314.0 29 7248.0 30 8648.0 31 10923.0 32 14641.0 33 21697.0 34 29732.0 35 38756.0 36 48440.0 37 78541.0 38 79244.0 39 50227.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.3596118802057 20.40371900432198 25.233272590232126 13.003396525240191 2 33.3353210002576 24.186408174558498 25.300773758980277 17.17749706620362 3 32.26412754143093 23.71747779378512 27.70028526995697 16.318109394826976 4 27.36230238615439 25.931420720712122 27.889193134439434 18.817083758694057 5 22.584984687014014 36.756413803631226 23.715331113506913 16.943270395847843 6 26.544178680125558 33.74581397345749 25.477278581855305 14.232728764561648 7 48.28766469808134 43.047379618940404 5.9253146079207735 2.7396410750574836 8 83.47891005886675 4.792821501149667 8.50133094177249 3.2269374982111 9 77.67595622680392 6.89489853357885 10.425710551172088 5.003434688445135 10 44.193945407535324 25.089922051653897 17.333489166420197 13.382643374390582 11 32.51314245370327 25.545972350758017 25.16481734136033 16.776067854178393 12 29.322460000190816 23.85414977149781 28.47475981032887 18.348630417982502 13 24.993082919103546 25.566723593447378 29.9733811645502 19.46681232289888 14 20.864301184013435 26.939167851316153 31.582437293083878 20.614093671586538 15 20.794176294925247 24.521767338021046 34.30156564548291 20.382490721570797 16 25.079427170293762 23.83888448951943 30.919113087117054 20.162575253069754 17 25.48014082222625 24.18211481400208 29.16241305944873 21.175331304322935 18 25.667617566523237 23.611097859998285 29.71840325150506 21.00288132197342 19 25.923788079722936 25.042933605564194 28.104099682291316 20.92917863242155 20 27.92497113907626 25.17769742302959 28.023241391812086 18.87409004608207 21 25.62134468052627 25.54978867125261 29.106599372215282 19.72226727600584 22 25.963620924885273 22.578783166210297 29.253766231288104 22.203829677616326 23 23.641628423955044 25.04317212559511 30.294667646188927 21.020531804260923 24 23.30316850009064 24.179729613692956 31.136166315247156 21.38093557096925 25 24.00083959050881 26.02754429316974 29.13331361567744 20.838302500644005 26 23.11115987520632 26.655329014530636 27.452939997901023 22.780571112362015 27 22.123209907168004 26.438514306431454 30.138675545972347 21.29960024042819 28 21.845334071155296 26.540839399692786 30.163004589125396 21.450821940026525 29 22.921536450631123 25.446986537929455 29.559071870855714 22.072405140583705 30 23.005256981481303 25.793317622813966 30.14606966693063 21.055355728774103 31 24.53822522015399 25.961474244607064 28.646732752616565 20.853567782622385 32 25.095646532395794 26.014187171438657 28.478099090761646 20.41206720540391 33 25.076087889860993 25.581750355394846 27.815013404825738 21.527148349918427 34 22.864053123181286 26.017287931840517 29.57290603264862 21.545752912329576 35 23.588199937030712 26.50744659536508 29.213217826033027 20.69113564157118 36 24.84687014015437 28.37863623787126 26.186875673819088 20.587617948155287 37 23.595117017927166 27.757530077375897 27.7477507561085 20.89960214858844 38 23.38354975050805 27.81000448417658 27.530697527978397 21.275748237336973 39 22.91461936973467 27.36564166658716 27.29575529752989 22.423983666148285 40 24.676805358113974 26.450440307977065 27.896348735366793 20.976405598542165 41 22.51247459761671 26.0678541783939 28.062835716943507 23.35683550704588 42 22.776039231774682 25.968152805472606 27.79235400188908 23.463453960863635 43 22.29995325007394 26.21430547737399 28.529380897407762 22.956360375144307 44 22.05332353811073 25.783776821577476 28.828962056233483 23.33393758407831 45 21.851535591959014 26.8833541640827 27.875120452615608 23.38998979134268 46 22.812771316535162 27.498735843836165 26.899812046215644 22.78868079341303 47 21.44724413956284 27.128314235829524 29.393061929340824 22.03137969526681 48 22.40752578401534 27.29193897703529 29.122103174224574 21.178432064724795 49 22.742169387385154 27.18221976281568 28.65698911394579 21.418621735853378 50 21.654279526394625 27.042924064762957 28.871418621735856 22.43137778710656 51 21.639014244416245 26.822770076231002 27.800225162909182 23.73799051644357 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 172.0 1 542.5 2 913.0 3 2981.5 4 5050.0 5 3441.0 6 1832.0 7 1628.0 8 1424.0 9 1403.0 10 1382.0 11 1427.5 12 1473.0 13 1465.5 14 1458.0 15 1382.5 16 1307.0 17 1421.5 18 1536.0 19 1582.5 20 1629.0 21 1852.5 22 2076.0 23 2452.5 24 2829.0 25 3237.0 26 4192.0 27 4739.0 28 5734.5 29 6730.0 30 7892.5 31 9055.0 32 9928.5 33 10802.0 34 12136.0 35 13470.0 36 14757.5 37 16045.0 38 17092.0 39 18139.0 40 19731.0 41 21323.0 42 22862.0 43 24401.0 44 25477.0 45 26553.0 46 27170.5 47 27788.0 48 27801.5 49 27815.0 50 27146.0 51 26477.0 52 25338.0 53 24199.0 54 23607.5 55 23016.0 56 22509.5 57 22003.0 58 21309.0 59 20615.0 60 19323.0 61 18031.0 62 16539.5 63 15048.0 64 13193.0 65 11338.0 66 10092.0 67 8846.0 68 7359.5 69 5873.0 70 4947.5 71 4022.0 72 3222.5 73 2423.0 74 2059.0 75 1327.5 76 960.0 77 720.5 78 481.0 79 405.5 80 330.0 81 245.5 82 161.0 83 118.0 84 75.0 85 54.5 86 34.0 87 28.5 88 23.0 89 15.5 90 8.0 91 5.0 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 1.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 419252.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.29014601704154 #Duplication Level Percentage of deduplicated Percentage of total 1 70.03703356765315 23.315430740676135 2 7.299039047679587 4.859721513626827 3 3.8598416141076433 3.8548407280889028 4 2.7583893602961114 3.6730873830444546 5 2.1485332109808524 3.5762492158007855 6 1.7589355276790164 3.5133132330597885 7 1.3784468400896146 3.212208760831895 8 1.3087661451366106 3.4855212859006683 9 1.1166613733394486 3.345643815305435 >10 8.289490945389675 45.322673462465985 >50 0.03690291532355135 0.8098487380103883 >100 0.0065122791747443546 0.3950481648831162 >500 0.0 0.0 >1k 0.00144717314994319 0.6364129583056054 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1638 0.3906958106341771 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1004 0.2394741110358448 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017411962256590308 0.0 2 0.0 0.0 0.0 0.09970137292129794 0.0 3 0.0 0.0 0.0 0.13500233749630294 0.0 4 0.0 0.0 0.0 0.178890023184147 0.0 5 0.0 0.0 0.0 0.3398910440498793 0.0 6 0.0 0.0 0.0 0.44483985765124556 0.0 7 0.0 0.0 0.0 0.5552746319635923 0.0 8 0.0 0.0 0.0 0.8271874672034958 0.0 9 0.0 0.0 0.0 0.9404844818867889 0.0 10 0.0 0.0 0.0 1.2837148063694388 0.0 11 0.0 0.0 0.0 1.5563432017020788 0.0 12 0.0 0.0 0.0 1.8616488412696899 0.0 13 0.0 0.0 0.0 1.9692213752110903 0.0 14 0.0 0.0 0.0 2.0243195023518075 0.0 15 0.0 0.0 0.0 2.116388234283915 0.0 16 0.0 0.0 0.0 2.2888382166334327 0.0 17 0.0 0.0 0.0 2.4791772013013653 0.0 18 0.0 0.0 0.0 2.6850199879785905 0.0 19 0.0 0.0 0.0 2.815967484949386 0.0 20 0.0 0.0 0.0 2.9550246629711965 0.0 21 0.0 0.0 0.0 3.1291442855370994 0.0 22 0.0 0.0 0.0 3.3070802285975978 0.0 23 0.0 0.0 0.0 3.483823571503535 0.0 24 0.0 0.0 0.0 3.6355223111636916 0.0 25 0.0 0.0 0.0 3.77219428887638 0.0 26 2.38520030912196E-4 0.0 0.0 3.8957476648888973 0.0 27 2.38520030912196E-4 0.0 0.0 4.041721923807161 0.0 28 2.38520030912196E-4 0.0 0.0 4.194851783652791 0.0 29 2.38520030912196E-4 0.0 0.0 4.363008405445889 0.0 30 2.38520030912196E-4 0.0 0.0 4.572190472555885 0.0 31 2.38520030912196E-4 0.0 0.0 4.746071575090876 0.0 32 2.38520030912196E-4 0.0 0.0 4.924007518151375 0.0 33 2.38520030912196E-4 0.0 0.0 5.1017049411809605 0.0 34 2.38520030912196E-4 0.0 0.0 5.284888324921527 0.0 35 2.38520030912196E-4 0.0 0.0 5.497409672464293 0.0 36 2.38520030912196E-4 0.0 0.0 5.684886416761279 0.0 37 2.38520030912196E-4 0.0 0.0 5.876179481552861 0.0 38 2.38520030912196E-4 0.0 0.0 6.1084979916613396 0.0 39 2.38520030912196E-4 0.0 0.0 6.4829744401934875 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATAT 30 2.1621909E-6 45.000004 9 ATAACGG 30 2.1621909E-6 45.000004 2 CTTACGG 30 2.1621909E-6 45.000004 2 ACGTTGA 20 7.0281554E-4 45.0 42 CGCATTC 20 7.0281554E-4 45.0 27 CACGAGG 55 1.8189894E-12 45.0 3 TACGATA 25 3.8865517E-5 45.0 33 ATTTGCG 20 7.0281554E-4 45.0 12 GCGTACG 20 7.0281554E-4 45.0 1 GCGTACA 20 7.0281554E-4 45.0 1 ATTCTCG 20 7.0281554E-4 45.0 30 AGGACCG 120 0.0 41.250004 7 CGTTTTA 390 0.0 40.961536 1 CGTTTTT 595 0.0 40.840336 1 TGTACGG 50 1.0786607E-9 40.5 2 AGACACG 85 0.0 39.705883 24 CAGACGA 40 3.4512232E-7 39.375 1 CGGGTAC 35 6.2387953E-6 38.57143 6 GCGCAAA 35 6.2387953E-6 38.57143 1 GTCCGTC 35 6.2387953E-6 38.57143 45 >>END_MODULE