##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936139.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 419365 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.638474836955872 31.0 31.0 34.0 30.0 34.0 2 31.82397434216017 31.0 31.0 34.0 30.0 34.0 3 31.5848747511118 31.0 31.0 34.0 30.0 34.0 4 35.468751564865926 37.0 35.0 37.0 33.0 37.0 5 31.87813479904141 37.0 35.0 37.0 10.0 37.0 6 33.76501377082017 37.0 35.0 37.0 19.0 37.0 7 20.94625684069963 32.0 0.0 37.0 0.0 37.0 8 28.12183658626733 35.0 17.0 37.0 17.0 37.0 9 34.64003433762951 35.0 32.0 39.0 28.0 39.0 10 35.9146900671253 37.0 35.0 39.0 32.0 39.0 11 36.328623037211024 37.0 35.0 39.0 32.0 39.0 12 36.820042206669605 39.0 35.0 39.0 33.0 39.0 13 36.64997317372694 39.0 35.0 39.0 32.0 39.0 14 38.0328520501234 40.0 37.0 41.0 33.0 41.0 15 38.17768292537527 40.0 37.0 41.0 33.0 41.0 16 38.234895615990844 40.0 37.0 41.0 34.0 41.0 17 38.19765836443194 40.0 37.0 41.0 33.0 41.0 18 38.052023893267204 40.0 37.0 41.0 33.0 41.0 19 38.005494020721805 40.0 37.0 41.0 34.0 41.0 20 37.96573629177447 40.0 37.0 41.0 34.0 41.0 21 37.91724869743541 40.0 36.0 41.0 33.0 41.0 22 37.89621689935974 39.0 36.0 41.0 33.0 41.0 23 37.85470652057277 39.0 36.0 41.0 33.0 41.0 24 37.6940755666305 39.0 36.0 41.0 33.0 41.0 25 37.553820657422534 39.0 36.0 41.0 33.0 41.0 26 37.3922954943784 39.0 36.0 41.0 33.0 41.0 27 37.38745961155556 39.0 36.0 41.0 33.0 41.0 28 37.235990127931515 39.0 36.0 41.0 32.0 41.0 29 37.285586541556874 39.0 36.0 41.0 32.0 41.0 30 37.163869183169794 39.0 36.0 41.0 32.0 41.0 31 37.008477102285596 39.0 35.0 40.0 31.0 41.0 32 36.92359400522218 39.0 35.0 40.0 31.0 41.0 33 36.69480285670001 39.0 35.0 40.0 30.0 41.0 34 36.5225924910281 39.0 35.0 40.0 30.0 41.0 35 36.357154268954254 39.0 35.0 40.0 30.0 41.0 36 36.17411324264066 39.0 35.0 40.0 29.0 41.0 37 36.10318934579662 39.0 35.0 40.0 29.0 41.0 38 36.039495427610795 39.0 35.0 40.0 29.0 41.0 39 35.91737507898847 39.0 35.0 40.0 28.0 41.0 40 35.85935163878722 39.0 35.0 40.0 27.0 41.0 41 35.70299619663062 39.0 35.0 40.0 27.0 41.0 42 35.612304317241545 39.0 35.0 40.0 26.0 41.0 43 35.50748154948553 38.0 35.0 40.0 26.0 41.0 44 35.38938394954276 38.0 35.0 40.0 25.0 41.0 45 35.331699116521406 38.0 35.0 40.0 24.0 41.0 46 35.13358053247171 38.0 34.0 40.0 24.0 41.0 47 35.07047798457191 38.0 34.0 40.0 24.0 41.0 48 34.9339572925733 38.0 34.0 40.0 23.0 41.0 49 34.759572210365675 38.0 34.0 40.0 23.0 41.0 50 34.55661774349314 38.0 34.0 40.0 22.0 41.0 51 32.26801235200839 36.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 10.0 10 12.0 11 9.0 12 6.0 13 5.0 14 2.0 15 9.0 16 22.0 17 41.0 18 113.0 19 244.0 20 422.0 21 767.0 22 1309.0 23 2250.0 24 3456.0 25 4906.0 26 5854.0 27 6380.0 28 7050.0 29 8081.0 30 9939.0 31 12130.0 32 16095.0 33 22048.0 34 29846.0 35 38425.0 36 48378.0 37 75798.0 38 76316.0 39 49423.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.150608658328665 22.0504810844968 26.227033729567324 15.571876527607214 2 30.894805241257618 26.406114005699095 26.400152611686718 16.298928141356576 3 27.36184469376319 26.518903580413244 30.32751898703993 15.791732738783637 4 25.25985716499946 24.45292287148427 33.6952296925113 16.59199027100497 5 21.375412826535356 35.52585456583167 26.023630965865056 17.075101641767912 6 23.067733358768614 33.058791267750046 29.989627174418466 13.883848199062868 7 46.68272268787334 41.84135538254266 8.48067912200589 2.995242807578124 8 78.60670299142751 5.254849594029068 11.624241412611926 4.514206001931491 9 73.63966950031595 6.488619698830375 12.673923670311066 7.197787130542606 10 35.79530957519106 30.47631538158883 21.354905631132784 12.373469412087323 11 23.79788489740441 25.13371406769759 32.55398042278206 18.514420612115938 12 23.020280662430103 22.225507612700156 35.41950329665089 19.334708428218857 13 19.240041491302325 25.163997949280457 37.45281556639205 18.14314499302517 14 17.113493019207613 28.72438090923182 33.26958616002766 20.89253991153291 15 15.49437840544633 26.56564090947027 40.572770736709074 17.36720994837433 16 17.64048024990164 26.334100366029595 34.84458645809736 21.18083292597141 17 18.46196034480703 25.31184052078738 33.52950293896725 22.69669619543834 18 19.270802284406187 25.952809604998034 34.954753019446066 19.821635091149716 19 19.080514587531148 27.470103609027934 32.13596747463427 21.313414328806648 20 19.765836443193876 27.759111990747915 33.80396551929703 18.67108604676117 21 19.210234521240448 28.35191301133857 33.68116080264209 18.75669166477889 22 18.023678657017157 25.32781705674055 32.21680397744209 24.43170030880021 23 16.573152265925863 28.30779869564699 33.79561956767971 21.323429470747442 24 19.035923360318577 25.593933685453006 33.67162257222229 21.69852038200613 25 16.63777377702002 29.721602899622045 31.718431438007467 21.92219188535047 26 16.582928952106162 28.14374113242641 32.83583513168719 22.43749478378024 27 19.057145923002636 27.522086964815852 32.89759517365541 20.523171938526104 28 15.363227737174059 26.802189023881347 35.24066147627961 22.59392176266498 29 17.616873129612628 23.788585122745104 33.8964863543691 24.69805539327316 30 17.93759612747845 25.958532543249913 34.248923968380765 21.85494736089087 31 17.87130542606083 25.507851155914302 31.926126405398637 24.69471701262623 32 18.374208624944856 26.327423604735735 32.90880259439867 22.389565175920737 33 17.52888295398996 26.219403145231478 31.240089182454422 25.011624718324132 34 16.234068174501925 24.979910102178295 34.222693834726314 24.56332788859347 35 15.992989400641447 24.496321819894366 33.1379585802344 26.37273019922979 36 17.32571864604819 27.574547232124758 31.11823828884146 23.981495832985587 37 15.893791804275512 26.218449322189503 36.85119168266308 21.036567190871914 38 16.430078809628842 26.777151169029366 30.920081551870087 25.8726884694717 39 18.5354047190395 25.743445447283392 34.004506813873355 21.71664301980375 40 18.689924051840283 24.600526987230694 32.15051327602447 24.559035684904558 41 16.235975820585885 27.571447307238323 31.54769711349302 24.64487975868277 42 17.989341027505873 25.71387693298201 33.050922227653714 23.245859811858406 43 20.065575334136135 26.486950508506908 30.455569730425765 22.991904426931193 44 18.57141153887425 26.2329951235797 31.061485817843643 24.134107519702408 45 18.307679467766743 25.259141797717977 30.641565223611888 25.79161351090339 46 20.082267237370786 26.478127645368595 30.016572675354404 23.423032441906216 47 16.47252393499696 24.581927437912082 35.05037377940457 23.89517484768638 48 17.82432964124331 24.937941888331167 31.530766754497876 25.70696171592765 49 17.847936761532317 23.696779654954515 34.033598416653746 24.42168516685942 50 17.70629403979827 23.529145255326505 33.473942746771904 25.290617958103322 51 17.309980565855522 23.355787917446616 30.439354738712098 28.89487677798576 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 138.0 1 327.5 2 517.0 3 3407.0 4 6297.0 5 4465.0 6 2633.0 7 2332.5 8 2032.0 9 2001.5 10 1971.0 11 1909.0 12 1847.0 13 1839.0 14 1831.0 15 1799.0 16 1767.0 17 1715.5 18 1664.0 19 1688.0 20 1712.0 21 1968.0 22 2224.0 23 2563.0 24 2902.0 25 3658.0 26 5291.0 27 6168.0 28 7094.5 29 8021.0 30 9413.0 31 10805.0 32 12340.5 33 13876.0 34 14864.5 35 15853.0 36 17143.0 37 18433.0 38 20249.5 39 22066.0 40 24419.5 41 26773.0 42 29045.0 43 31317.0 44 35532.0 45 39747.0 46 45229.5 47 50712.0 48 46018.0 49 41324.0 50 37391.0 51 33458.0 52 27924.5 53 22391.0 54 18820.5 55 15250.0 56 12706.0 57 10162.0 58 8771.5 59 7381.0 60 6505.0 61 5629.0 62 4626.0 63 3623.0 64 2881.0 65 2139.0 66 1578.0 67 1017.0 68 792.0 69 567.0 70 430.5 71 294.0 72 242.5 73 191.0 74 138.5 75 61.0 76 36.0 77 31.5 78 27.0 79 25.5 80 24.0 81 18.0 82 12.0 83 13.5 84 15.0 85 11.0 86 7.0 87 7.0 88 7.0 89 4.0 90 1.0 91 2.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 419365.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.94108538702839 #Duplication Level Percentage of deduplicated Percentage of total 1 76.00095754085461 33.395645647986115 2 8.963326841978645 7.877166202304544 3 3.6281578462289112 4.782755811562847 4 2.181436362910312 3.8341872595604265 5 1.498394411023959 3.2920538379124946 6 1.1417380960237782 3.010152670020243 7 0.9360588063218915 2.879200795510908 8 0.7504416376798625 2.638017606341781 9 0.6511767534098749 2.575207199126812 >10 4.191166076899675 29.788590752921095 >50 0.03516653948829437 1.0406332798681934 >100 0.01703379256464252 1.8091566510562294 >500 0.0010989543590091946 0.3510628280576214 >1k 0.003846340256532182 2.726169457770704 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2116 0.5045723892074923 No Hit GAATCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTC 1990 0.47452696338511796 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCG 1979 0.47190395001967256 No Hit GAATCTATCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTC 1449 0.3455223969573045 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCG 1331 0.3173846172188905 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1233 0.2940159526903771 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGC 1193 0.2844777222705758 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGC 894 0.21317944988256052 No Hit GCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC 560 0.13353522587721914 No Hit CCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC 495 0.11803560144504192 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCT 488 0.11636641112157667 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 450 0.10730509222276537 No Hit GCTGTCACTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC 426 0.10158215397088455 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3845576049503415E-4 0.0 0.0 0.11350494199563627 0.0 2 2.3845576049503415E-4 0.0 0.0 0.6817450192553026 0.0 3 2.3845576049503415E-4 0.0 0.0 0.8672636009204392 0.0 4 2.3845576049503415E-4 0.0 0.0 1.2061092365838828 0.0 5 2.3845576049503415E-4 0.0 0.0 2.4234258939110322 0.0 6 2.3845576049503415E-4 0.0 0.0 2.9423056287482265 0.0 7 2.3845576049503415E-4 0.0 0.0 3.6543345295863987 0.0 8 2.3845576049503415E-4 0.0 0.0 5.049539184242843 0.0 9 2.3845576049503415E-4 0.0 0.0 5.507851155914299 0.0 10 2.3845576049503415E-4 0.0 0.0 7.480357206729222 0.0 11 2.3845576049503415E-4 0.0 0.0 8.807601969644582 0.0 12 2.3845576049503415E-4 0.0 0.0 10.485138244727146 0.0 13 2.3845576049503415E-4 0.0 0.0 10.956803738986325 0.0 14 2.3845576049503415E-4 0.0 0.0 11.155437387478688 0.0 15 2.3845576049503415E-4 0.0 0.0 11.488321629129755 0.0 16 2.3845576049503415E-4 0.0 0.0 12.126667699974963 0.0 17 2.3845576049503415E-4 0.0 0.0 12.961262861707581 0.0 18 2.3845576049503415E-4 0.0 0.0 13.904832305986432 0.0 19 2.3845576049503415E-4 0.0 0.0 14.481418334863424 0.0 20 2.3845576049503415E-4 0.0 0.0 15.01031321164141 0.0 21 2.3845576049503415E-4 0.0 0.0 15.692296686657208 0.0 22 2.3845576049503415E-4 0.0 0.0 16.48110834237478 0.0 23 2.3845576049503415E-4 0.0 0.0 17.28899645893196 0.0 24 2.3845576049503415E-4 0.0 0.0 17.887758873534988 0.0 25 2.3845576049503415E-4 0.0 0.0 18.40711551989317 0.0 26 2.3845576049503415E-4 0.0 0.0 18.893326815542547 0.0 27 2.3845576049503415E-4 0.0 0.0 19.40505287756489 0.0 28 2.3845576049503415E-4 0.0 0.0 19.905094607322976 0.0 29 2.3845576049503415E-4 0.0 0.0 20.425166620962646 0.0 30 2.3845576049503415E-4 0.0 0.0 20.99149905213835 0.0 31 2.3845576049503415E-4 0.0 0.0 21.547339429852276 0.0 32 2.3845576049503415E-4 0.0 0.0 22.034027637022643 0.0 33 2.3845576049503415E-4 0.0 0.0 22.532638632217758 0.0 34 4.769115209900683E-4 0.0 0.0 23.03768793294624 0.0 35 4.769115209900683E-4 0.0 0.0 23.55585230050195 0.0 36 4.769115209900683E-4 0.0 0.0 24.01821802010182 0.0 37 4.769115209900683E-4 0.0 0.0 24.516590559536443 0.0 38 4.769115209900683E-4 0.0 0.0 24.99350208052651 0.0 39 4.769115209900683E-4 0.0 0.0 25.48519785866727 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGAAG 35 1.2094642E-7 45.000004 2 TATCACG 20 7.028156E-4 45.0 1 CAAACGC 25 3.886554E-5 45.0 18 CTCGTTT 20 7.028156E-4 45.0 18 GATCGTT 20 7.028156E-4 45.0 9 TTTACGG 20 7.028156E-4 45.0 2 CGCGGGT 20 7.028156E-4 45.0 4 CGAAAAT 25 3.886554E-5 45.0 35 CCAATTG 20 7.028156E-4 45.0 15 TTGTACG 25 3.886554E-5 45.0 1 TACGGGT 25 3.886554E-5 45.0 4 CGACACC 20 7.028156E-4 45.0 19 TATGCGT 20 7.028156E-4 45.0 19 GCGTTAC 20 7.028156E-4 45.0 22 TCGGCAC 20 7.028156E-4 45.0 18 CGTTACG 20 7.028156E-4 45.0 23 CCGTAGG 25 3.886554E-5 45.0 3 CGTAGGT 25 3.886554E-5 45.0 4 GCGGGTA 20 7.028156E-4 45.0 5 TTGGTCG 20 7.028156E-4 45.0 1 >>END_MODULE