SRR2936137.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936137.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	443604
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3904	0.8800642014048565	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2201	0.4961632446957196	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	899	0.20265822670670236	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGAACGT	25	3.8869188E-5	45.000004	38
CGGGTTC	20	7.0285983E-4	45.0	6
ACGATAA	20	7.0285983E-4	45.0	1
CTTGCGA	20	7.0285983E-4	45.0	1
AACGCAC	20	7.0285983E-4	45.0	41
ATCGGCG	20	7.0285983E-4	45.0	13
CGTTATT	405	0.0	44.444447	1
CGTTTTA	1040	0.0	44.134613	1
AAGGCGA	100	0.0	42.750004	6
AGGCGAT	290	0.0	41.896553	7
ATAACGG	60	3.6379788E-12	41.250004	2
TAGGCGA	95	0.0	40.263157	6
CGAAGGA	95	0.0	40.263157	4
ACACGCG	90	0.0	40.0	36
AACGAGC	45	1.9237632E-8	40.0	15
CGTTTTT	1850	0.0	39.89189	1
CGGCGCA	40	3.4518234E-7	39.375	22
TAAGGCG	40	3.4518234E-7	39.375	5
GCGTATG	40	3.4518234E-7	39.375	1
GCGATGC	75	0.0	39.0	9