SRR2936136.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936136.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	242594
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1862	0.7675375318433267	No Hit
GAATCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTC	1518	0.6257368277863427	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCG	1406	0.5795691566980222	No Hit
GAATCTATCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTC	1061	0.43735624129203526	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1012	0.4171578851908951	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGC	1009	0.4159212511438865	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCG	1004	0.41386019439887217	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGC	668	0.275357181133911	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	415	0.17106770983618722	No Hit
GCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC	385	0.15870136936610138	No Hit
GAACTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCT	344	0.14180070405698408	No Hit
GCTGTCACTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC	299	0.12325119335185536	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCT	291	0.11995350255983248	No Hit
GAATATGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTC	277	0.11418254367379242	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTT	264	0.10882379613675523	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCG	251	0.10346504859971804	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACGAC	30	2.1583983E-6	45.000004	26
GGCCGAT	60	0.0	45.000004	8
CGACCAA	30	2.1583983E-6	45.000004	29
CACGACC	30	2.1583983E-6	45.000004	27
AGGCGAT	130	0.0	45.000004	7
AACGGGC	30	2.1583983E-6	45.000004	4
CACGTGA	30	2.1583983E-6	45.000004	43
TAATACG	35	1.2066266E-7	45.0	4
TCGCAAG	20	7.022272E-4	45.0	2
CGACGGT	20	7.022272E-4	45.0	28
AGGACTA	35	1.2066266E-7	45.0	7
ATAGCGG	25	3.881679E-5	45.0	2
GCGTTAA	20	7.022272E-4	45.0	1
ACGGGCC	25	3.881679E-5	45.0	5
CGTTAGG	20	7.022272E-4	45.0	2
GCCGATA	20	7.022272E-4	45.0	9
GTTCGCC	20	7.022272E-4	45.0	41
CGGATAC	20	7.022272E-4	45.0	16
TCGTAAG	20	7.022272E-4	45.0	2
TAGGCGA	25	3.881679E-5	45.0	6