##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936136.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 242594 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.787434973659696 31.0 31.0 34.0 30.0 34.0 2 31.950225479607905 33.0 31.0 34.0 30.0 34.0 3 31.64804982810787 31.0 31.0 34.0 30.0 34.0 4 35.5332366010701 37.0 35.0 37.0 33.0 37.0 5 32.035446053900756 37.0 35.0 37.0 10.0 37.0 6 33.85594862197746 37.0 35.0 37.0 19.0 37.0 7 20.67736217713546 32.0 0.0 37.0 0.0 37.0 8 27.90929289265192 35.0 17.0 37.0 17.0 37.0 9 34.521158808544314 35.0 32.0 39.0 28.0 39.0 10 36.07519971639859 37.0 35.0 39.0 32.0 39.0 11 36.55188916461248 38.0 35.0 39.0 32.0 39.0 12 36.90801503747001 39.0 37.0 39.0 33.0 39.0 13 36.65056431733679 39.0 35.0 39.0 32.0 39.0 14 38.094487085418436 40.0 37.0 41.0 33.0 41.0 15 38.21344303651368 40.0 37.0 41.0 33.0 41.0 16 38.298156590847256 40.0 37.0 41.0 34.0 41.0 17 38.20411057157226 40.0 37.0 41.0 33.0 41.0 18 38.05781264169765 40.0 37.0 41.0 33.0 41.0 19 37.963206014988 40.0 37.0 41.0 33.0 41.0 20 37.928559651104315 40.0 36.0 41.0 33.0 41.0 21 37.86289026109467 40.0 36.0 41.0 33.0 41.0 22 37.84139343924417 39.0 36.0 41.0 33.0 41.0 23 37.76521678194844 39.0 36.0 41.0 33.0 41.0 24 37.59225702202033 39.0 35.0 41.0 33.0 41.0 25 37.463131816945186 39.0 35.0 41.0 33.0 41.0 26 37.29752590748328 39.0 35.0 41.0 33.0 41.0 27 37.2533286066432 39.0 35.0 41.0 33.0 41.0 28 37.147262504431275 39.0 35.0 41.0 32.0 41.0 29 37.0867704889651 39.0 35.0 41.0 32.0 41.0 30 36.94653618803433 39.0 35.0 41.0 32.0 41.0 31 36.8326999018937 39.0 35.0 40.0 31.0 41.0 32 36.64450481050644 39.0 35.0 40.0 31.0 41.0 33 36.36822015383728 39.0 35.0 40.0 30.0 41.0 34 36.145926939660505 39.0 35.0 40.0 30.0 41.0 35 35.98569214407611 39.0 35.0 40.0 29.0 41.0 36 35.78231118659159 39.0 35.0 40.0 27.0 41.0 37 35.648886617146346 39.0 35.0 40.0 27.0 41.0 38 35.50743217062252 38.0 35.0 40.0 26.0 41.0 39 35.4625876979645 38.0 35.0 40.0 26.0 41.0 40 35.242433860689054 38.0 34.0 40.0 25.0 41.0 41 35.17953040883122 38.0 34.0 40.0 24.0 41.0 42 35.07618490152271 38.0 34.0 40.0 24.0 41.0 43 35.00971994360949 38.0 34.0 40.0 24.0 41.0 44 34.859633791437545 38.0 34.0 40.0 23.0 41.0 45 34.76633387470424 38.0 34.0 40.0 23.0 41.0 46 34.60320123333636 38.0 34.0 40.0 23.0 41.0 47 34.479051419243675 38.0 33.0 40.0 23.0 41.0 48 34.35412252570138 38.0 33.0 40.0 22.0 41.0 49 34.177568282809965 37.0 33.0 40.0 22.0 41.0 50 34.001038772599486 37.0 33.0 40.0 20.0 41.0 51 31.868191299042845 35.0 29.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 17.0 10 13.0 11 14.0 12 10.0 13 4.0 14 14.0 15 13.0 16 31.0 17 64.0 18 128.0 19 220.0 20 390.0 21 598.0 22 935.0 23 1510.0 24 2268.0 25 3128.0 26 3757.0 27 4151.0 28 4254.0 29 4781.0 30 5682.0 31 7152.0 32 9655.0 33 13317.0 34 18084.0 35 23255.0 36 27820.0 37 42850.0 38 42610.0 39 25855.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.609825469714835 19.41762780612876 22.754890887655918 17.21765583650049 2 32.63848240269751 27.757075607805636 24.14734082458758 15.457101164909274 3 29.254639438733026 26.495708879856885 28.785955134916776 15.463696546493319 4 26.230656982448043 23.895891901695837 32.638894614046514 17.23455650180961 5 23.703389201711502 34.018978210508095 25.077289627938036 17.20034295984237 6 23.654748262529164 34.92254548752236 27.438848446375424 13.983857803573049 7 44.15401864844143 43.02785724296561 9.7549815741527 3.0631425344402583 8 74.56078880763745 7.925587607278003 13.382441445377873 4.13118213970667 9 69.13155312992077 7.69887136532643 14.373397528380751 8.796177976372045 10 38.738798156590846 24.850985597335466 21.755690577672983 14.654525668400703 11 30.339579709308556 25.13376258275143 26.84773737190532 17.678920336034693 12 29.038228480506522 21.280410892272688 30.826401312480932 18.85495931473985 13 22.458098716373858 24.99278630139245 33.00370165791405 19.545413324319647 14 18.572594540672892 29.175494859724477 30.48138041336554 21.77053018623709 15 17.519394543970584 26.11400117068023 38.5739136169897 17.79269066835948 16 20.21319570970428 24.359629669324057 34.386258522469646 21.040916098502024 17 19.739564869699993 23.71328227408757 32.37136944854366 24.17578340766878 18 20.862428584383785 25.818033422096175 31.94349406827869 21.37604392524135 19 23.557878595513493 26.37575537729705 28.657757405376884 21.408608621812576 20 25.70014097628136 24.719902388352555 30.879576576502306 18.70038005886378 21 23.588794446688706 26.716241951573412 30.203962175486616 19.491001426251266 22 22.53889214077842 24.36292736011608 28.48009431395665 24.61808618514885 23 22.47417495898497 27.65402277055492 29.918711921976637 19.953090348483475 24 22.91235562297501 23.758625522477885 30.930278572429653 22.398740282117448 25 21.442822163779812 27.926082260896806 28.740199675177458 21.890895900145924 26 20.511636726382353 27.234803828619008 29.81978119821595 22.43377824678269 27 22.318359069061888 28.11652390413613 28.34901110497374 21.21610592182824 28 19.879716728360965 27.468115452154628 31.847861035310025 20.804306784174383 29 21.894193590937945 27.266131891143225 30.34246518875158 20.49720932916725 30 20.134463342044732 27.646190754923865 31.404321623782945 20.815024279248455 31 22.110192337815445 26.725310601251472 28.154447348244393 23.01004971268869 32 25.814735731304157 28.023776350610486 27.504802262215883 18.656685655869477 33 22.444907953205767 26.94130934812897 29.148701122039295 21.46508157662597 34 22.249519773778413 27.568695021311328 30.64667716431569 19.535108040594572 35 23.304780827225734 26.267343792509294 28.593040223583436 21.834835156681535 36 23.247483449714338 28.445880771989412 27.86589940394239 20.44073637435386 37 23.657633741972184 28.11528727008912 29.474760299100556 18.75231868883814 38 22.634525173747083 26.578975572355457 28.259973453589126 22.526525800308335 39 24.9424965168141 24.170012448782742 30.206023232231633 20.68146780217153 40 24.163829278547695 25.40829534118733 31.98677625992399 18.441099120340983 41 21.077190697214277 27.78510597953783 30.490449063043606 20.647254260204292 42 23.226872882264193 26.598761717107593 29.38613485906494 20.788230541563273 43 24.26811874984542 26.64369275414891 27.41370355408625 21.67448494191942 44 22.372358755781264 26.75622645242669 28.311087660865482 22.56032713092657 45 20.98856525717866 26.396778156096197 28.19278300370166 24.421873583023487 46 22.806417306281276 28.48215537070167 27.39309298663611 21.318334336380946 47 21.69179781857754 26.702638977056314 31.51149657452369 20.09406662984245 48 22.687700437768452 25.52330230755913 28.572841867482296 23.21615538719012 49 20.229684163664395 26.294961952892486 30.834645539460993 22.640708343982126 50 20.014922050833903 25.94829220838108 30.45252561893534 23.584260121849677 51 20.75195594285102 26.29083983940246 27.372070207836963 25.58513400990956 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 192.0 1 509.5 2 827.0 3 3081.5 4 5336.0 5 3688.5 6 2041.0 7 1832.5 8 1624.0 9 1542.0 10 1460.0 11 1395.5 12 1331.0 13 1255.5 14 1180.0 15 1159.5 16 1139.0 17 1120.5 18 1102.0 19 1130.0 20 1158.0 21 1343.5 22 1529.0 23 1608.5 24 1688.0 25 1992.0 26 2602.5 27 2909.0 28 3403.5 29 3898.0 30 4398.0 31 4898.0 32 5347.5 33 5797.0 34 6294.0 35 6791.0 36 7520.5 37 8250.0 38 8804.5 39 9359.0 40 10339.0 41 11319.0 42 12442.5 43 13566.0 44 15800.5 45 18035.0 46 21304.0 47 24573.0 48 20848.5 49 17124.0 50 16191.0 51 15258.0 52 13636.5 53 12015.0 54 11341.5 55 10668.0 56 10565.0 57 10462.0 58 10775.5 59 11089.0 60 10839.5 61 10590.0 62 9118.0 63 7646.0 64 6260.5 65 4875.0 66 4084.5 67 3294.0 68 2841.0 69 2388.0 70 2104.0 71 1820.0 72 1537.5 73 1255.0 74 1003.0 75 605.0 76 459.0 77 367.5 78 276.0 79 209.5 80 143.0 81 112.5 82 82.0 83 61.5 84 41.0 85 31.5 86 22.0 87 25.0 88 28.0 89 17.5 90 7.0 91 4.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 242594.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.54057396308235 #Duplication Level Percentage of deduplicated Percentage of total 1 72.45116879683576 29.372119673198842 2 8.308167851223704 6.7363578654047505 3 4.230851355885672 5.14563426960271 4 2.938514880680027 4.76516319447307 5 2.1677902164739855 4.394172980370495 6 1.7417563981331787 4.236708245051403 7 1.3960487651119993 3.9617632752664944 8 1.1815066752076786 3.831916700330593 9 0.9344273963131298 3.409400067602661 >10 4.577575776062797 26.775600385829822 >50 0.03152040183428403 0.8800712301211078 >100 0.03253718899022868 2.5585958432607567 >500 0.0010167871559446462 0.275357181133911 >1k 0.007117510091612523 3.6571390883533805 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1862 0.7675375318433267 No Hit GAATCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTC 1518 0.6257368277863427 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCG 1406 0.5795691566980222 No Hit GAATCTATCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTC 1061 0.43735624129203526 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1012 0.4171578851908951 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGC 1009 0.4159212511438865 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCG 1004 0.41386019439887217 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGC 668 0.275357181133911 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 415 0.17106770983618722 No Hit GCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 385 0.15870136936610138 No Hit GAACTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCT 344 0.14180070405698408 No Hit GCTGTCACTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 299 0.12325119335185536 No Hit GAATGACTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCT 291 0.11995350255983248 No Hit GAATATGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTC 277 0.11418254367379242 No Hit GAATGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTT 264 0.10882379613675523 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCG 251 0.10346504859971804 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.1221134900286074E-4 0.0 0.0 0.08079342440456071 0.0 2 4.1221134900286074E-4 0.0 0.0 0.4526080612051411 0.0 3 4.1221134900286074E-4 0.0 0.0 0.579981368047025 0.0 4 4.1221134900286074E-4 0.0 0.0 0.8479187448988845 0.0 5 4.1221134900286074E-4 0.0 0.0 1.8780349060570336 0.0 6 4.1221134900286074E-4 0.0 0.0 2.2622158833276997 0.0 7 4.1221134900286074E-4 0.0 0.0 2.61960312291318 0.0 8 4.1221134900286074E-4 0.0 0.0 3.276255801874737 0.0 9 4.1221134900286074E-4 0.0 0.0 3.4918423374032335 0.0 10 4.1221134900286074E-4 0.0 0.0 5.109771882239462 0.0 11 4.1221134900286074E-4 0.0 0.0 5.689341038937484 0.0 12 4.1221134900286074E-4 0.0 0.0 6.959364205215298 0.0 13 4.1221134900286074E-4 0.0 0.0 7.256156376497358 0.0 14 4.1221134900286074E-4 0.0 0.0 7.392186121668302 0.0 15 4.1221134900286074E-4 0.0 0.0 7.631680915438964 0.0 16 4.1221134900286074E-4 0.0 0.0 7.947434808775156 0.0 17 4.1221134900286074E-4 0.0 0.0 8.28256263551448 0.0 18 4.1221134900286074E-4 0.0 0.0 8.667568035483153 0.0 19 4.1221134900286074E-4 0.0 0.0 8.895933122830737 0.0 20 4.1221134900286074E-4 0.0 0.0 9.100389951936156 0.0 21 4.1221134900286074E-4 0.0 0.0 9.367915117439013 0.0 22 4.1221134900286074E-4 0.0 0.0 9.650279891505972 0.0 23 4.1221134900286074E-4 0.0 0.0 9.945835428741024 0.0 24 8.244226980057215E-4 0.0 0.0 10.170490613947583 0.0 25 8.244226980057215E-4 0.0 0.0 10.384428304080068 0.0 26 8.244226980057215E-4 0.0 0.0 10.598365994212553 0.0 27 8.244226980057215E-4 0.0 0.0 10.800761766572958 0.0 28 8.244226980057215E-4 0.0 0.0 11.005218595678377 0.0 29 8.244226980057215E-4 0.0 0.0 11.226576090092912 0.0 30 8.244226980057215E-4 0.0 0.0 11.444635893715425 0.0 31 8.244226980057215E-4 0.0 0.0 11.706802311681246 0.0 32 8.244226980057215E-4 0.0 0.0 11.947945950847918 0.0 33 8.244226980057215E-4 0.0 0.0 12.174662192799492 0.0 34 8.244226980057215E-4 0.0 0.0 12.385714403488956 0.0 35 8.244226980057215E-4 0.0 0.0 12.617377181628564 0.0 36 8.244226980057215E-4 0.0 0.0 12.84574226897615 0.0 37 8.244226980057215E-4 0.0 0.0 13.09224465567986 0.0 38 8.244226980057215E-4 0.0 0.0 13.338334831034569 0.0 39 8.244226980057215E-4 0.0 0.0 13.572470877268193 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGAC 30 2.1583983E-6 45.000004 26 GGCCGAT 60 0.0 45.000004 8 CGACCAA 30 2.1583983E-6 45.000004 29 CACGACC 30 2.1583983E-6 45.000004 27 AGGCGAT 130 0.0 45.000004 7 AACGGGC 30 2.1583983E-6 45.000004 4 CACGTGA 30 2.1583983E-6 45.000004 43 TAATACG 35 1.2066266E-7 45.0 4 TCGCAAG 20 7.022272E-4 45.0 2 CGACGGT 20 7.022272E-4 45.0 28 AGGACTA 35 1.2066266E-7 45.0 7 ATAGCGG 25 3.881679E-5 45.0 2 GCGTTAA 20 7.022272E-4 45.0 1 ACGGGCC 25 3.881679E-5 45.0 5 CGTTAGG 20 7.022272E-4 45.0 2 GCCGATA 20 7.022272E-4 45.0 9 GTTCGCC 20 7.022272E-4 45.0 41 CGGATAC 20 7.022272E-4 45.0 16 TCGTAAG 20 7.022272E-4 45.0 2 TAGGCGA 25 3.881679E-5 45.0 6 >>END_MODULE