SRR2936134.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936134.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	419820
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	570	0.13577247391739317	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	553	0.1317231194321376	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTTG	20	7.028165E-4	45.0	1
CGAACAT	20	7.028165E-4	45.0	31
CGTATGG	25	3.886562E-5	45.0	2
CACGACC	20	7.028165E-4	45.0	27
CCTAACG	20	7.028165E-4	45.0	18
CGTTACC	20	7.028165E-4	45.0	24
ATCCGAG	20	7.028165E-4	45.0	17
CCCCGAT	20	7.028165E-4	45.0	40
GTAGACG	20	7.028165E-4	45.0	1
CTTGCGG	45	3.8380676E-10	45.0	2
TCGTAAG	20	7.028165E-4	45.0	1
TCATCGA	25	3.886562E-5	45.0	16
ATGCGAT	25	3.886562E-5	45.0	18
AGCCTAA	20	7.028165E-4	45.0	16
TCAAGCG	25	3.886562E-5	45.0	17
AATACGG	20	7.028165E-4	45.0	2
GCCGTCA	20	7.028165E-4	45.0	29
AGTAATC	20	7.028165E-4	45.0	31
TAGTACG	25	3.886562E-5	45.0	1
AACACGA	25	3.886562E-5	45.0	37