SRR2936132.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936132.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	587554
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1425	0.24253089928755484	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCG	613	0.10433083597422535	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGC	588	0.10007590791654894	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGATG	25	3.888469E-5	45.000004	1
CGCGATA	20	7.030468E-4	45.0	31
TAACCGG	20	7.030468E-4	45.0	2
GTCCCGT	20	7.030468E-4	45.0	27
TGTAACG	20	7.030468E-4	45.0	1
CACCCGC	20	7.030468E-4	45.0	27
ACGGGTA	75	0.0	42.000004	5
CGTTTTA	55	6.002665E-11	40.909092	1
ACCGATC	50	1.0804797E-9	40.500004	10
CGACGGT	45	1.9255822E-8	40.000004	28
TACGGGT	45	1.9255822E-8	40.000004	4
CGTTATT	130	0.0	39.80769	1
GTTTACG	40	3.45437E-7	39.375	1
AGTACGG	80	0.0	39.375	2
AACGGGC	115	0.0	39.130432	4
TAACGGG	220	0.0	38.863636	3
CGATTGT	35	6.243077E-6	38.571426	10
GTAACGG	100	0.0	38.250004	2
TATGCGG	65	9.094947E-12	38.07692	2
ACGGGCT	130	0.0	38.07692	5