SRR2936131.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936131.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	282971
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	423	0.14948528294418864	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	331	0.1169731173865873	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTAATC	20	7.0242654E-4	45.0	8
AGTCATA	25	3.88333E-5	45.0	25
CGTATGG	25	3.88333E-5	45.0	2
TTAGCCG	20	7.0242654E-4	45.0	1
TAGACGT	20	7.0242654E-4	45.0	30
CGTTGGC	20	7.0242654E-4	45.0	25
ATTCGTT	20	7.0242654E-4	45.0	22
CTAAGGC	20	7.0242654E-4	45.0	4
ACGGGCC	20	7.0242654E-4	45.0	5
GCATTAT	20	7.0242654E-4	45.0	9
TTAAGCG	20	7.0242654E-4	45.0	1
TACTCTA	25	3.88333E-5	45.0	29
ACCAAGC	20	7.0242654E-4	45.0	17
GATTCGT	20	7.0242654E-4	45.0	21
GGTTACG	20	7.0242654E-4	45.0	1
ACGAACA	25	3.88333E-5	45.0	29
CGGACGG	25	3.88333E-5	45.0	2
CCTCCGC	80	0.0	42.1875	45
TTACGGG	70	0.0	41.785717	3
GTCATAC	55	6.002665E-11	40.90909	39