SRR2936127.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936127.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	588036
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2338	0.3975947050860832	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	828	0.14080770565067446	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGATAT	60	0.0	45.000004	9
TTCACCG	20	7.0304726E-4	45.0	38
TAGCCCG	25	3.888474E-5	45.0	27
ACCGTTT	20	7.0304726E-4	45.0	41
TCGACGT	40	6.8048394E-9	45.0	26
CGTTATT	190	0.0	41.447372	1
AGTACGG	60	3.6379788E-12	41.250004	2
CTGACGG	55	6.002665E-11	40.909092	2
ATTACGG	50	1.0804797E-9	40.5	2
TTTCGAC	45	1.9255822E-8	40.0	24
AGGCGTC	45	1.9255822E-8	40.0	35
TACGGGA	180	0.0	40.0	4
AATTGCG	45	1.9255822E-8	40.0	1
CGGTTTT	370	0.0	39.52703	1
GCGTCAT	40	3.4543882E-7	39.375	37
CTTACGG	40	3.4543882E-7	39.375	2
CACGGGA	230	0.0	39.130432	4
CGCACGG	75	0.0	39.0	2
CGTTTTT	1255	0.0	38.904385	1
ACGGGAA	175	0.0	38.571426	5