##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936123.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 884995 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.8936129582653 31.0 31.0 34.0 30.0 34.0 2 32.0168419030616 33.0 31.0 34.0 30.0 34.0 3 31.765098107898915 33.0 31.0 34.0 30.0 34.0 4 35.60504296634444 37.0 35.0 37.0 33.0 37.0 5 31.073530358928583 37.0 35.0 37.0 0.0 37.0 6 33.34935790597687 37.0 35.0 37.0 17.0 37.0 7 29.590080169944464 35.0 32.0 37.0 0.0 37.0 8 32.61810744693473 35.0 33.0 37.0 17.0 37.0 9 36.497251396900545 39.0 35.0 39.0 32.0 39.0 10 36.86498115808564 38.0 37.0 39.0 33.0 39.0 11 36.9516618737959 39.0 37.0 39.0 33.0 39.0 12 36.935104718105755 39.0 37.0 39.0 33.0 39.0 13 36.74951835886078 39.0 35.0 39.0 33.0 39.0 14 37.92237018288239 40.0 37.0 41.0 33.0 41.0 15 38.05666359696947 40.0 37.0 41.0 33.0 41.0 16 38.124225560596386 40.0 37.0 41.0 33.0 41.0 17 38.088377900440115 40.0 37.0 41.0 33.0 41.0 18 37.98167899253668 40.0 37.0 41.0 33.0 41.0 19 37.84901383623636 40.0 37.0 41.0 33.0 41.0 20 37.70771134300194 40.0 36.0 41.0 33.0 41.0 21 37.6090633280414 39.0 36.0 41.0 33.0 41.0 22 37.59636156136475 39.0 35.0 41.0 33.0 41.0 23 37.52207300606218 39.0 35.0 41.0 33.0 41.0 24 37.45185679015135 39.0 35.0 41.0 33.0 41.0 25 37.297124842513234 39.0 35.0 41.0 32.0 41.0 26 37.11435431838598 39.0 35.0 41.0 32.0 41.0 27 37.079269374403246 39.0 35.0 41.0 32.0 41.0 28 36.92007864451212 39.0 35.0 41.0 31.0 41.0 29 36.85096638964062 39.0 35.0 41.0 31.0 41.0 30 36.69250899722597 39.0 35.0 41.0 31.0 41.0 31 36.53742111537353 39.0 35.0 41.0 30.0 41.0 32 36.39283950756784 39.0 35.0 40.0 30.0 41.0 33 36.16819304063865 39.0 35.0 40.0 30.0 41.0 34 35.9094593754767 39.0 35.0 40.0 28.0 41.0 35 35.72644930197346 38.0 35.0 40.0 27.0 41.0 36 35.53057135916022 38.0 35.0 40.0 26.0 41.0 37 35.38709258244397 38.0 34.0 40.0 25.0 41.0 38 35.2007062186792 38.0 34.0 40.0 25.0 41.0 39 35.1189735535229 38.0 34.0 40.0 24.0 41.0 40 34.977512867304334 38.0 34.0 40.0 24.0 41.0 41 34.843099678529256 38.0 34.0 40.0 23.0 41.0 42 34.78885869411692 38.0 34.0 40.0 23.0 41.0 43 34.65399465533704 38.0 34.0 40.0 23.0 41.0 44 34.49224458895248 38.0 33.0 40.0 23.0 41.0 45 34.388683551884476 38.0 33.0 40.0 23.0 41.0 46 34.31506957666428 37.0 33.0 40.0 23.0 41.0 47 34.163712789337794 37.0 33.0 40.0 22.0 41.0 48 34.04712681992554 37.0 33.0 40.0 22.0 41.0 49 33.91369555760202 37.0 33.0 40.0 21.0 41.0 50 33.72412838490613 37.0 33.0 40.0 20.0 41.0 51 31.823584314035674 35.0 29.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 22.0 9 47.0 10 32.0 11 47.0 12 26.0 13 40.0 14 47.0 15 98.0 16 180.0 17 321.0 18 626.0 19 1032.0 20 1714.0 21 2658.0 22 3989.0 23 5978.0 24 8428.0 25 11452.0 26 14050.0 27 15309.0 28 16242.0 29 17674.0 30 21007.0 31 25567.0 32 32397.0 33 45830.0 34 64398.0 35 75025.0 36 87023.0 37 131527.0 38 156065.0 39 146134.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.29854405957096 19.94497144051661 23.6601336730716 14.096350826840828 2 34.0964638218295 23.53120639099656 25.48714964491325 16.88518014226069 3 32.57713320414239 23.127136311504586 28.068407166142183 16.227323318210836 4 27.575862010519835 25.272798151401986 28.90750795202233 18.243831886055855 5 21.923965672122442 38.60360792998831 23.24736297945186 16.22506341843739 6 25.368391911818712 34.38539200786445 26.22060011638484 14.025615963932001 7 68.39586664331438 19.09807400041808 8.846490658139311 3.6595686981282376 8 83.06747495748563 4.608952592952503 9.147848292928208 3.1757241566336534 9 77.50314973530924 6.531675320199549 10.94085277317951 5.024322171311702 10 43.79482369956892 24.32544816637382 17.978971632608094 13.90075650144916 11 31.078367674393643 25.628054395787547 26.005344662964198 17.288233266854615 12 28.02117526087718 22.829959491296563 30.461302041254466 18.687563206571788 13 24.724094486409527 22.72193628212589 32.56470375538845 19.989265476076138 14 21.403397759309374 24.52691823117645 32.991146842637534 21.07853716687665 15 20.931417691625377 24.40601359329714 34.35386640602489 20.30870230905259 16 24.925112571257465 23.34261775490257 31.33407533375895 20.398194340081016 17 24.52759620110848 24.054034203583072 30.20435143701377 21.214018158294678 18 25.322515946417777 23.66465347261849 31.14311380290284 19.86971677806089 19 24.886920265086243 26.024779801015825 28.207729987175068 20.88056994672286 20 25.481047915524947 26.435403589850793 29.027282640014917 19.056265854609347 21 25.41257295238956 25.563873242221707 30.0222035152741 19.001350290114633 22 25.114492172272158 23.29741975943367 30.15598958186205 21.43209848643213 23 23.5367431454415 24.763303747478798 30.58921236843146 21.11074073864824 24 23.539116040203616 24.643755049463557 30.837349363555727 20.9797795467771 25 23.846575404380815 26.13833976463144 28.39891750800852 21.616167322979226 26 22.24803529963446 25.336075345058447 29.314515901219778 23.101373454087312 27 22.347357894677373 25.365341047124563 30.37418290498816 21.913118153209904 28 21.349386154724037 25.852123458324623 29.994406748060726 22.804083638890617 29 22.05684777880101 25.360482262611654 29.988644003638438 22.594025954948897 30 23.047474844490647 25.21618766207719 30.078475019632876 21.657862473799288 31 24.024655506528287 25.825569635986646 28.438352759055135 21.711422098429935 32 25.031553850586725 25.63178323041373 27.59326323877536 21.743399680224183 33 24.683190300510173 25.320482036621677 27.604788727619926 22.391538935248224 34 22.41594585280143 26.35901897750835 29.240504183639455 21.984530986050768 35 22.96318058294115 27.09111350911587 28.53100864976638 21.4146972581766 36 23.780247346030205 27.353487872812842 27.46128509200617 21.404979689150785 37 22.805665568732028 27.973378380668816 27.967841626223876 21.25311442437528 38 23.437420550398592 27.374165955739866 27.815411386505005 21.37300210735654 39 23.06431109780281 26.485008389877905 27.53439284967712 22.916287662642162 40 24.610534522793913 25.165565907152015 28.619822710862774 21.604076859191295 41 22.111763343295728 25.11754303696631 29.42174814546975 23.348945474268216 42 22.206114158837057 25.238560669834293 28.954626862298653 23.600698309029994 43 22.435832970807745 25.392911824360592 28.94626523313691 23.224989971694757 44 22.31210345821163 25.072458036486083 29.039260108814176 23.576178396488114 45 22.296962129729547 25.435284945112684 28.28106373482336 23.98668919033441 46 22.75967660834242 25.99698303380245 28.068972141085542 23.174368216769587 47 21.337182695947433 25.772123006344668 29.99271182323064 22.897982474477256 48 21.813682563178325 25.916756591845154 29.56479980112882 22.704761043847704 49 22.797868914513643 25.478901010740174 29.216888231006955 22.50634184373923 50 21.26825575285736 25.373137701342944 30.029661184526468 23.328945361273227 51 21.755151159046097 25.572686851338144 28.72807191001079 23.94409007960497 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 683.0 1 1284.5 2 1886.0 3 7753.5 4 13621.0 5 10207.0 6 6793.0 7 5426.0 8 4059.0 9 3890.5 10 3722.0 11 3556.5 12 3391.0 13 3338.0 14 3285.0 15 3187.0 16 3089.0 17 2986.5 18 2884.0 19 2969.0 20 3054.0 21 3397.0 22 3740.0 23 4230.5 24 4721.0 25 5327.0 26 7021.0 27 8109.0 28 10103.5 29 12098.0 30 13806.0 31 15514.0 32 17794.5 33 20075.0 34 23097.0 35 26119.0 36 28471.5 37 30824.0 38 33245.0 39 35666.0 40 39068.0 41 42470.0 42 45143.5 43 47817.0 44 53515.5 45 59214.0 46 60397.5 47 61581.0 48 61850.5 49 62120.0 50 58587.5 51 55055.0 52 51826.0 53 48597.0 54 47124.0 55 45651.0 56 45838.5 57 46026.0 58 44965.5 59 43905.0 60 41008.5 61 38112.0 62 35703.0 63 33294.0 64 30140.0 65 26986.0 66 23562.0 67 20138.0 68 17494.5 69 14851.0 70 12631.0 71 10411.0 72 9142.5 73 7874.0 74 6431.5 75 3932.0 76 2875.0 77 2224.0 78 1573.0 79 1281.0 80 989.0 81 755.0 82 521.0 83 417.5 84 314.0 85 236.0 86 158.0 87 133.5 88 109.0 89 81.5 90 54.0 91 42.0 92 30.0 93 19.0 94 8.0 95 6.0 96 4.0 97 3.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 884995.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.9220728117902 #Duplication Level Percentage of deduplicated Percentage of total 1 72.98373242808532 26.217269503578944 2 8.246433912506346 5.924579988853377 3 3.943020794274051 4.249244402109458 4 2.6643827425115987 3.8284060349991567 5 1.9257568686419233 3.4588589226580133 6 1.3630758861377572 2.937870673790157 7 1.0141523097903915 2.550131718017496 8 0.8382163782483527 2.4088375817177923 9 0.643088557172904 2.079096657767475 >10 6.320792656156242 42.728554437033125 >50 0.037484127614107667 0.8891549578349792 >100 0.0173003273951244 1.082957901395305 >500 0.0012815057329664571 0.3965858584695149 >1k 9.611292997248428E-4 0.4994726133945719 >5k 3.203764332416143E-4 0.7489787483806161 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6508 0.7353713862790185 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1892 0.2137865185679015 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1386 0.1566110542997418 No Hit GAATCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTC 1062 0.12000067796993202 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 997 0.11265600370623562 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 914 0.10327741964643869 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03141260685088616 0.0 2 0.0 0.0 0.0 0.14384262057977729 0.0 3 0.0 0.0 0.0 0.22316510262769845 0.0 4 0.0 0.0 0.0 0.3483635500765541 0.0 5 0.0 0.0 0.0 0.7578573890247967 0.0 6 0.0 0.0 0.0 1.0975203249735874 0.0 7 0.0 0.0 0.0 1.3794428217108572 0.0 8 0.0 0.0 0.0 1.8740218871293057 0.0 9 0.0 0.0 0.0 2.1518765642743745 0.0 10 0.0 0.0 0.0 2.7214843021711985 0.0 11 0.0 0.0 0.0 3.186797665523534 0.0 12 0.0 0.0 0.0 3.646574274430929 0.0 13 0.0 0.0 0.0 3.8226204667822983 0.0 14 0.0 0.0 0.0 3.9359544404205673 0.0 15 0.0 0.0 0.0 4.0567460833112055 0.0 16 0.0 0.0 0.0 4.279120221018198 0.0 17 0.0 0.0 0.0 4.517765637093995 0.0 18 2.2598997734450476E-4 0.0 0.0 4.794151379386324 0.0 19 2.2598997734450476E-4 0.0 0.0 4.98206204554828 0.0 20 2.2598997734450476E-4 0.0 0.0 5.170424691664925 0.0 21 2.2598997734450476E-4 0.0 0.0 5.409635082684083 0.0 22 2.2598997734450476E-4 0.0 0.0 5.655964157989593 0.0 23 2.2598997734450476E-4 0.0 0.0 5.8996943485556415 0.0 24 2.2598997734450476E-4 0.0 0.0 6.1117859422934595 0.0 25 2.2598997734450476E-4 0.0 0.0 6.305120367911683 0.0 26 2.2598997734450476E-4 0.0 0.0 6.48353945502517 0.0 27 2.2598997734450476E-4 0.0 0.0 6.686930434635224 0.0 28 2.2598997734450476E-4 0.0 0.0 6.872129221069046 0.0 29 2.2598997734450476E-4 0.0 0.0 7.090322544195165 0.0 30 2.2598997734450476E-4 0.0 0.0 7.409985367148967 0.0 31 2.2598997734450476E-4 0.0 0.0 7.6358623495048 0.0 32 2.2598997734450476E-4 0.0 0.0 7.856202577415692 0.0 33 2.2598997734450476E-4 0.0 0.0 8.086599359318415 0.0 34 2.2598997734450476E-4 0.0 0.0 8.332024474714546 0.0 35 2.2598997734450476E-4 0.0 0.0 8.614398951406505 0.0 36 2.2598997734450476E-4 0.0 0.0 8.870784580703846 0.0 37 2.2598997734450476E-4 0.0 0.0 9.121181475601556 0.0 38 2.2598997734450476E-4 0.0 0.0 9.42129616551506 0.0 39 2.2598997734450476E-4 0.0 0.0 9.913728326148735 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCGCG 20 7.032405E-4 45.000004 10 GACGTCG 20 7.032405E-4 45.000004 19 CGACTAA 20 7.032405E-4 45.000004 10 TTCGACG 25 3.8900755E-5 45.0 1 TTACGGG 275 0.0 42.545456 3 CGAATAT 175 0.0 42.428574 14 CGTTATT 520 0.0 41.971153 1 CGTTTTT 2325 0.0 41.51613 1 CGGTCTA 50 1.0804797E-9 40.5 31 TACGAAT 190 0.0 40.263157 12 TAGTACG 45 1.9274012E-8 40.0 1 CGGTTTT 675 0.0 39.333332 1 CGTAGCG 35 6.246659E-6 38.57143 2 GTATACG 35 6.246659E-6 38.57143 1 ACGGGTA 165 0.0 38.181816 5 TACGGGA 380 0.0 37.894737 4 AATTGCG 30 1.1397097E-4 37.499996 1 CCGAACG 30 1.1397097E-4 37.499996 36 CGTTTTA 265 0.0 37.35849 1 CTACGAA 205 0.0 37.317074 11 >>END_MODULE