##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936120.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1034128 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.900592576547584 31.0 31.0 34.0 30.0 34.0 2 32.03342526263673 33.0 31.0 34.0 30.0 34.0 3 31.852173038540684 33.0 31.0 34.0 30.0 34.0 4 35.64719067658936 37.0 35.0 37.0 33.0 37.0 5 31.161988651308157 37.0 35.0 37.0 0.0 37.0 6 33.39662885058716 37.0 35.0 37.0 17.0 37.0 7 29.474048667089566 35.0 32.0 37.0 0.0 37.0 8 32.54896009004688 35.0 33.0 37.0 17.0 37.0 9 36.39617242739777 39.0 35.0 39.0 32.0 39.0 10 36.809173525907816 38.0 35.0 39.0 33.0 39.0 11 36.97365413179026 39.0 37.0 39.0 33.0 39.0 12 37.04513561183915 39.0 37.0 39.0 33.0 39.0 13 36.914966039020314 39.0 37.0 39.0 33.0 39.0 14 38.208392964894095 40.0 37.0 41.0 33.0 41.0 15 38.2850285457893 40.0 38.0 41.0 34.0 41.0 16 38.31092766079247 40.0 37.0 41.0 34.0 41.0 17 38.269719028979004 40.0 37.0 41.0 34.0 41.0 18 38.17260145745981 40.0 37.0 41.0 33.0 41.0 19 38.085929401389386 40.0 37.0 41.0 34.0 41.0 20 37.980873740968235 40.0 37.0 41.0 33.0 41.0 21 37.87536939334396 40.0 36.0 41.0 33.0 41.0 22 37.82088387511024 40.0 36.0 41.0 33.0 41.0 23 37.775893313013476 40.0 36.0 41.0 33.0 41.0 24 37.727817059396905 40.0 36.0 41.0 33.0 41.0 25 37.57491625794873 40.0 36.0 41.0 33.0 41.0 26 37.41194997137685 39.0 36.0 41.0 32.0 41.0 27 37.36324613587486 39.0 36.0 41.0 32.0 41.0 28 37.19637124224467 39.0 35.0 41.0 32.0 41.0 29 37.16591949932697 39.0 35.0 41.0 32.0 41.0 30 37.061742840344714 39.0 35.0 41.0 31.0 41.0 31 36.93121837915616 39.0 35.0 41.0 31.0 41.0 32 36.84771324246128 39.0 35.0 41.0 31.0 41.0 33 36.675921162564016 39.0 35.0 41.0 30.0 41.0 34 36.4890226354958 39.0 35.0 41.0 30.0 41.0 35 36.369930995002555 39.0 35.0 41.0 30.0 41.0 36 36.22519552705275 39.0 35.0 40.0 29.0 41.0 37 36.07316212306407 39.0 35.0 40.0 29.0 41.0 38 35.96083560255597 39.0 35.0 40.0 28.0 41.0 39 35.9200553509817 39.0 35.0 40.0 28.0 41.0 40 35.73761468599632 39.0 35.0 40.0 27.0 41.0 41 35.61727078272709 38.0 35.0 40.0 27.0 41.0 42 35.53968560951836 38.0 35.0 40.0 26.0 41.0 43 35.37478822737611 38.0 34.0 40.0 26.0 41.0 44 35.12000835486516 38.0 34.0 40.0 24.0 41.0 45 35.013923808271315 38.0 34.0 40.0 24.0 41.0 46 34.894579781226305 38.0 34.0 40.0 24.0 41.0 47 34.780281551219964 38.0 34.0 40.0 23.0 41.0 48 34.686327031083195 38.0 34.0 40.0 23.0 41.0 49 34.49520755651138 38.0 33.0 40.0 23.0 41.0 50 34.3269807992821 37.0 33.0 40.0 23.0 41.0 51 32.352858640323056 35.0 30.0 39.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 23.0 9 33.0 10 72.0 11 46.0 12 39.0 13 36.0 14 46.0 15 74.0 16 152.0 17 257.0 18 528.0 19 969.0 20 1593.0 21 2474.0 22 3586.0 23 5157.0 24 7028.0 25 9891.0 26 12617.0 27 14963.0 28 16493.0 29 18962.0 30 22795.0 31 28320.0 32 36329.0 33 49166.0 34 70589.0 35 86031.0 36 103101.0 37 159682.0 38 196982.0 39 186063.0 40 30.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.4759101387836 20.39109278541921 23.624251543329258 14.508745532467934 2 32.662784490894744 24.956001578141198 24.727596583788465 17.65361734717559 3 32.309540018256925 23.925858307675647 27.000139247752696 16.76446242631473 4 29.06013568919902 25.654947936812466 26.425258768740427 18.859657605248092 5 21.705920350285457 39.56686212925286 21.762683149474725 16.964534370986957 6 25.96709498243931 35.587567496480126 24.481882320176997 13.963455200903564 7 67.66222363189083 20.139963331425122 7.996108798910773 4.201704237773274 8 81.9478826605604 5.564398217628765 8.626204879860133 3.8615142419507067 9 75.1750266891526 8.066602973713119 11.02900221249207 5.72936812464221 10 39.73618352853806 27.40057323658193 18.34511781907075 14.51812541580926 11 29.110903099036094 26.64031918679313 25.369876843098726 18.87890087107205 12 28.14844970835332 23.197708600869525 29.321031825847477 19.33280986492968 13 24.146043816626182 23.917638822273453 30.59901675614624 21.337300604954127 14 19.6529829963022 27.164625655624835 30.148105456964707 23.034285891108258 15 20.05486748255535 26.8708515773676 32.55892887534232 20.51535206473473 16 22.370344870267513 25.711033837203907 30.980110779323255 20.938510513205326 17 22.42643077065895 25.45806708647285 29.314262837869197 22.801239304998994 18 22.458148314328593 26.749686692556434 29.252858446923398 21.539306546191575 19 24.416029737131186 27.5605147525258 27.0580624448811 20.965393065461914 20 25.653110640075504 26.188344189500718 27.940158278278897 20.218386892144878 21 25.245714263611468 26.742821004749896 27.979805207865947 20.031659523772685 22 23.144910494638964 25.68521498305819 27.94489656986369 23.224977952439158 23 23.435590178391845 26.32575464545975 28.234996054647006 22.0036591215014 24 22.23380471276283 25.137797255272076 30.047344235916633 22.581053796048458 25 23.099364875527982 26.639062089025728 27.68138953785218 22.58018349759411 26 21.766164343292125 28.0033032661334 27.729352652669686 22.501179737904785 27 22.733936224529266 27.260841984744633 28.523258242693363 21.48196354803274 28 21.214298423406 27.43557857441245 29.495865115343555 21.854257886837996 29 21.987316850525275 26.776956044126067 28.14061702226417 23.095110083084492 30 22.488802159887364 26.630455804310493 28.21285179397521 22.667890241826928 31 22.86409419336871 27.38403756594928 27.03727198180496 22.714596258877044 32 22.938843160614546 27.039882877168008 27.20968777559451 22.811586186622932 33 22.8822737610818 26.77279795151084 27.176036235359646 23.168892052047717 34 21.41175947271518 27.13242461281389 27.84326505036127 23.612550864109664 35 22.41047529899587 25.900468800767413 27.37417418346665 24.31488171677007 36 21.865571766744544 28.326377392353752 26.54961474788421 23.258436093017497 37 22.281864527408597 28.379755697553882 27.287627837172963 22.050751937864558 38 21.19234756239073 26.99685145359182 27.59648708863893 24.214313895378524 39 22.79147262234462 25.559408506490495 27.38113657110145 24.267982300063434 40 22.8700895827209 25.96351708879365 28.785701576593997 22.380691751891447 41 20.246043043027555 26.78691612643696 28.918083641483456 24.048957189052032 42 21.116728296690546 27.420300001547197 27.44176736342116 24.021204338341096 43 21.9949561369579 25.896310708152182 28.19689632231213 23.911836832577784 44 21.86905296056194 26.520411399749356 27.511584639425678 24.098951000263025 45 21.557196014419876 26.04551854315907 27.399993037612365 24.99729240480869 46 21.19080036513855 27.73573484133492 26.917074095276405 24.156390698250117 47 21.5121338944502 26.111854625346187 29.00337289000975 23.372638590193866 48 21.058418300249098 25.43495582751845 29.32402952052357 24.18259635170888 49 20.642222239413304 26.176643510281128 28.78434777899834 24.396786471307227 50 20.077205142883667 25.755612458032275 29.73335989355283 24.43382250553123 51 20.476188634288985 25.125516377082914 28.41379403710179 25.984500951526314 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 629.0 1 1283.5 2 1938.0 3 7166.5 4 12395.0 5 9218.5 6 6042.0 7 4736.0 8 3430.0 9 3220.0 10 3010.0 11 2898.0 12 2786.0 13 2800.0 14 2814.0 15 2803.5 16 2793.0 17 2815.5 18 2838.0 19 2942.0 20 3046.0 21 3762.5 22 4479.0 23 4756.5 24 5034.0 25 6225.5 26 8912.5 27 10408.0 28 12847.0 29 15286.0 30 17980.0 31 20674.0 32 23625.5 33 26577.0 34 29091.0 35 31605.0 36 34551.5 37 37498.0 38 39363.5 39 41229.0 40 44974.0 41 48719.0 42 50563.5 43 52408.0 44 56327.5 45 60247.0 46 63459.5 47 66672.0 48 72590.5 49 78509.0 50 79659.0 51 80809.0 52 78004.5 53 75200.0 54 69151.5 55 63103.0 56 59427.0 57 55751.0 58 52661.0 59 49571.0 60 48132.5 61 46694.0 62 42482.0 63 38270.0 64 32369.0 65 26468.0 66 21817.5 67 17167.0 68 14586.0 69 12005.0 70 10030.0 71 8055.0 72 6626.0 73 5197.0 74 4127.5 75 2424.0 76 1790.0 77 1457.0 78 1124.0 79 869.0 80 614.0 81 469.0 82 324.0 83 274.0 84 224.0 85 153.0 86 82.0 87 63.0 88 44.0 89 40.0 90 36.0 91 33.0 92 30.0 93 21.5 94 13.0 95 12.0 96 11.0 97 7.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1034128.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.73752011150352 #Duplication Level Percentage of deduplicated Percentage of total 1 71.95096323515563 25.71348995658425 2 8.863306312652028 6.33505175205636 3 4.377007064911745 4.6927013403142945 4 2.774980225557513 3.966836464795448 5 1.9197872339719122 3.430421744193947 6 1.3677346593881696 2.932766693825108 7 1.0461039642514167 2.6169613022810996 8 0.8163856122912618 2.3340477790400866 9 0.6689737256059142 2.151671577561792 >10 6.120730890074844 41.13547850076953 >50 0.06587427161433282 1.5336296950692785 >100 0.024599537938342325 1.640547694925288 >500 0.0027332819898861767 0.6893328416325594 >1k 5.466563979772353E-4 0.2669614079894834 >5k 2.7332819898861767E-4 0.5601012489614703 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5734 0.5544768152491761 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1600 0.15471972521776803 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1133 0.10956090541983196 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08238825367846146 0.0 2 0.0 0.0 0.0 0.3021869633159531 0.0 3 0.0 0.0 0.0 0.478857549548992 0.0 4 0.0 0.0 0.0 0.6498228459146257 0.0 5 0.0 0.0 0.0 1.1771270094224313 0.0 6 0.0 0.0 0.0 1.7816943357108597 0.0 7 0.0 0.0 0.0 2.2206148561880155 0.0 8 0.0 0.0 0.0 2.9490546624789196 0.0 9 0.0 0.0 0.0 3.3147734129624187 0.0 10 0.0 0.0 0.0 3.9475770891030897 0.0 11 0.0 0.0 0.0 4.67224560209181 0.0 12 0.0 0.0 0.0 5.266852846069345 0.0 13 0.0 0.0 0.0 5.552020639611344 0.0 14 0.0 0.0 0.0 5.695039685609518 0.0 15 0.0 0.0 0.0 5.889212940757817 0.0 16 0.0 0.0 0.0 6.249516500858695 0.0 17 0.0 0.0 0.0 6.659330373029258 0.0 18 9.669982826110501E-5 0.0 0.0 7.165167174663098 0.0 19 9.669982826110501E-5 0.0 0.0 7.445209877307258 0.0 20 9.669982826110501E-5 0.0 0.0 7.744882645088422 0.0 21 9.669982826110501E-5 0.0 0.0 8.092325128030573 0.0 22 9.669982826110501E-5 0.0 0.0 8.47013135704671 0.0 23 1.9339965652221002E-4 0.0 0.0 8.860121764423747 0.0 24 1.9339965652221002E-4 0.0 0.0 9.175943403524515 0.0 25 1.9339965652221002E-4 0.0 0.0 9.46159469620782 0.0 26 1.9339965652221002E-4 0.0 0.0 9.728099422895426 0.0 27 1.9339965652221002E-4 0.0 0.0 9.989575758513453 0.0 28 1.9339965652221002E-4 0.0 0.0 10.263429672148902 0.0 29 2.9009948478331504E-4 0.0 0.0 10.551788560023518 0.0 30 2.9009948478331504E-4 0.0 0.0 10.897297046400446 0.0 31 2.9009948478331504E-4 0.0 0.0 11.193295220707688 0.0 32 3.8679931304442004E-4 0.0 0.0 11.50331487011279 0.0 33 3.8679931304442004E-4 0.0 0.0 11.798442745965684 0.0 34 3.8679931304442004E-4 0.0 0.0 12.083997338820726 0.0 35 3.8679931304442004E-4 0.0 0.0 12.401462875001934 0.0 36 3.8679931304442004E-4 0.0 0.0 12.716704315133136 0.0 37 3.8679931304442004E-4 0.0 0.0 13.018311079479522 0.0 38 3.8679931304442004E-4 0.0 0.0 13.318950845543299 0.0 39 3.8679931304442004E-4 0.0 0.0 13.625102501817956 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 35 1.2117744E-7 45.0 1 TAAACGG 85 0.0 42.352943 2 AATACGG 55 6.184564E-11 40.90909 2 CGTTCAT 105 0.0 40.714283 17 CGTTATT 445 0.0 38.932583 1 CGCATCG 35 6.247683E-6 38.571426 21 TAGGCGA 70 0.0 38.571426 6 CGTTTTT 1960 0.0 38.456635 1 CCCGATC 90 0.0 37.500004 41 GACGGGA 500 0.0 36.899998 4 TACGGGA 360 0.0 36.875004 4 CATACGG 55 2.748493E-9 36.81818 2 TCGACGG 110 0.0 36.81818 2 TAACGGG 285 0.0 36.31579 3 CGTTTTA 335 0.0 36.268658 1 CGAATAT 180 0.0 36.250004 14 ACACGAC 100 0.0 36.000004 26 TTAGCGA 25 0.0021070107 36.000004 1 TATTGCG 50 4.8781658E-8 36.000004 1 GTTAACG 25 0.0021070107 36.000004 1 >>END_MODULE