SRR2936116.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936116.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	390090
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC	501	0.1284319003306929	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	489	0.12535568714911943	No Hit
CCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC	428	0.10971827014278755	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTTG	25	3.886051E-5	45.0	1
AAGTACG	20	7.02755E-4	45.0	1
GTCGATG	25	3.886051E-5	45.0	1
CTATCCC	20	7.02755E-4	45.0	38
TAGCGGA	20	7.02755E-4	45.0	3
ATTAACG	20	7.02755E-4	45.0	1
CGTCTCA	20	7.02755E-4	45.0	34
ACGGGTG	55	1.8189894E-12	45.0	5
CAGGGTA	25	3.886051E-5	45.0	5
AACATCG	20	7.02755E-4	45.0	13
CGAATAT	35	1.2091732E-7	45.0	14
ATGCGAA	25	3.886051E-5	45.0	26
ATAACGG	35	1.2091732E-7	45.0	2
ACGTAGG	25	3.886051E-5	45.0	2
AGCTACG	35	1.2091732E-7	45.0	9
TATACGG	35	1.2091732E-7	45.0	2
TTACCGG	20	7.02755E-4	45.0	2
AAGGCGC	25	3.886051E-5	45.0	30
TCGAATC	20	7.02755E-4	45.0	17
TAATCGC	20	7.02755E-4	45.0	43