SRR2936114.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936114.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	294808
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	379	0.12855824808010638	No Hit
GCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC	334	0.11329407614447369	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	333	0.11295487232368184	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGAGT	25	3.883728E-5	45.0	15
ACACGTC	35	1.2078272E-7	45.0	39
ATAGCGG	45	3.8198777E-10	45.0	2
ACGGGCG	35	1.2078272E-7	45.0	5
TGGCACG	25	3.883728E-5	45.0	1
AACGGGC	20	7.024745E-4	45.0	4
TACGCGG	20	7.024745E-4	45.0	2
GAGGTAC	20	7.024745E-4	45.0	6
CTACGCG	20	7.024745E-4	45.0	1
ATCCCCG	20	7.024745E-4	45.0	38
TACTAGC	20	7.024745E-4	45.0	18
TGCTACT	20	7.024745E-4	45.0	26
GGCGCTT	20	7.024745E-4	45.0	42
GCTACTT	20	7.024745E-4	45.0	27
CGCACGG	20	7.024745E-4	45.0	2
CTAGGTC	20	7.024745E-4	45.0	32
GCATACG	20	7.024745E-4	45.0	1
TCGTGTA	30	2.1599917E-6	44.999996	17
ACGATAG	30	2.1599917E-6	44.999996	2
CGTCCAT	30	2.1599917E-6	44.999996	42