SRR2936113.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2936113.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	496586
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	670	0.13492124224202856	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTACGG	35	1.2100645E-7	45.000004	2
TAGGCGA	35	1.2100645E-7	45.000004	6
TCGTTAG	20	7.029412E-4	45.0	1
CGATTAC	20	7.029412E-4	45.0	10
TCGATTG	20	7.029412E-4	45.0	12
TCGCTTA	20	7.029412E-4	45.0	28
ATCGCAT	20	7.029412E-4	45.0	38
TACGGGA	150	0.0	40.5	4
TATGCGG	45	1.9244908E-8	40.0	2
GCACCGA	45	1.9244908E-8	40.0	9
TACGAAT	85	0.0	39.705883	12
CGAATAT	85	0.0	39.705883	14
CGGTCTA	40	3.452933E-7	39.375	31
CGGTAGT	80	0.0	39.375	12
CACGCCG	75	0.0	39.0	26
CACGACC	70	0.0	38.57143	27
TGTAACG	35	6.241122E-6	38.57143	1
TACCGGG	35	6.241122E-6	38.57143	3
AGTACGG	65	9.094947E-12	38.07692	2
TGATATG	60	1.546141E-10	37.499996	1